WERAM Information

Tag Content
WERAM ID WERAM-Brr-0172
Ensembl Protein ID Bra034950.1-P
Gene Name AL3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra034950 Bra034950.1 Bra034950.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-11 44.8 197 249
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCg..kddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C +Cg  +    ++++++Cd C+ wfH+kCvk++  +++  k++ Cp C +
  Bra034950.1-P 197 TLCGACGdgDGTGTDDFWICCDVCEVWFHGKCVKITPARAEHIKQYKCPACSN 249
                    78****62233333667*******************666664479******86 PP
Protein Sequence
(Fasta)		MEGGAGLYNP RTVEEVFRDF KGRRAAIVKA LTSDVGEFYQ QCDPEKENLC LYGLPNEQWE 60
VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD TWLLSVSFYF GSRFAFDKAD 120
RKRLFDMING VPTIFEVVTG NMKKQTKEKS SAANRYGNLS KSDSKVRSSD GKNSKAVQAS 180
NEEDGSEEED EDEHGETLCG ACGDGDGTGT DDFWICCDVC EVWFHGKCVK ITPARAEHIK 240
QYKCPACSNK RARP 254
Nucleotide Sequence
(Fasta)		ATGGAAGGAG GAGCTGGTCT TTACAATCCT CGCACCGTCG AAGAAGTTTT CAGAGATTTC 60
AAAGGCCGTA GAGCCGCCAT TGTCAAAGCT CTCACCTCCG ATGTTGGAGA GTTTTACCAG 120
CAATGCGACC CAGAGAAAGA GAATCTTTGC TTGTATGGGT TACCAAACGA ACAATGGGAA 180
GTTAACTTAC CAGCTGAAGA GGTGCCTCCA GAGCTTCCAG AGCCAGCTTT AGGCATTAAC 240
TTTGCAAGAG ATGGGCTTTC TGAGAAGGAA TGGCTTTCTC TTGTTGCTAT CCACAGCGAC 300
ACTTGGTTGC TCTCCGTCTC TTTTTACTTC GGGTCCAGAT TCGCTTTCGA CAAAGCTGAT 360
AGGAAACGCT TGTTTGATAT GATCAATGGG GTTCCTACCA TTTTTGAAGT AGTCACTGGA 420
AATATGAAAA AGCAAACAAA GGAAAAGTCC TCTGCTGCAA ATCGATATGG CAATCTATCC 480
AAGTCTGATT CGAAAGTGAG ATCTTCGGAT GGCAAAAACT CAAAGGCCGT GCAGGCAAGC 540
AATGAGGAAG ATGGATCAGA GGAAGAGGAT GAGGATGAAC ACGGGGAAAC CCTCTGTGGT 600
GCCTGTGGAG ACGGTGATGG TACTGGTACT GATGATTTCT GGATCTGCTG TGACGTTTGC 660
GAGGTATGGT TCCATGGGAA GTGTGTGAAG ATAACTCCAG CTAGAGCTGA GCATATCAAA 720
CAGTACAAGT GCCCTGCATG TAGCAACAAA AGAGCACGAC CTTAA 766
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0060 Bo3g127230.1 Brassica oleracea 98 7e-116 413
WERAM-Arl-0088 fgenesh2_kg.5__ 761__ AT3G42790.1 Arabidopsis lyrata 82 5e-97 350
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 81 2e-96 349
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 77 8e-92 333
WERAM-Thc-0077 EOY27191 Theobroma cacao 78 9e-90 327
WERAM-Prp-0082 EMJ27202 Prunus persica 73 7e-89 323
WERAM-Amt-0032 ERN11177 Amborella trichopoda 73 1e-87 319
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 72 1e-86 317
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 76 4e-86 314
WERAM-Mua-0059 GSMUA_Achr3P16750_001 Musa acuminata 72 1e-84 309
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 72 3e-83 305
WERAM-Met-0044 KEH37528 Medicago truncatula 67 5e-82 301
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 65 2e-78 289
WERAM-Sei-0086 Si023009m Setaria italica 66 6e-77 284
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 66 9e-77 283
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 65 5e-76 281
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 66 1e-75 280
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 66 1e-75 280
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 66 1e-75 280
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 66 1e-75 280
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 66 1e-75 280
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 66 1e-75 280
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 66 1e-75 280
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 64 1e-75 280
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 64 1e-75 280
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 66 6e-75 277
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 64 1e-74 276
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 66 2e-74 276
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 63 2e-74 276
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 62 3e-74 275
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 2e-73 273
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 66 9e-70 260
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 60 1e-68 256
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 67 2e-66 249
Created Date 25-Jun-2016