WERAM Information

Tag Content
WERAM ID WERAM-Brr-0102
Ensembl Protein ID Bra020107.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra020107 Bra020107.1 Bra020107.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.80e-12 47.6 200 249
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C +C  d++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  Bra020107.1-P 200 TLCGAC-GDNYASDFWICCDMCEKWFHGKCVKITPARAEHIKQYKCPSCSN 249
                    78****.66666789*******************666664479******86 PP
Protein Sequence
(Fasta)		MEGGGGARYN PRTVEEVFRD FKGRRAGILR ALTTDVKEFF QQCNPEKDNL CLYGFPNEVW 60
EVNLPAEEVP PELPEPALGI NFARDGMQEK EWISLVAVHS DAWLLSVSFY FGSRFGFDKA 120
DRKRLFNMIN EVPTVFEVVT GSAKKQTEEQ PSSVNRNGNR SKSNSKVRDL EVKSSRTIEV 180
NDEEEGVEEE EEDEEEHGET LCGACGDNYA SDFWICCDMC EKWFHGKCVK ITPARAEHIK 240
QYKCPSCSNK RARP 254
Nucleotide Sequence
(Fasta)		ATGGAAGGAG GAGGAGGTGC CCGCTACAAC CCTCGAACTG TTGAAGAAGT CTTCCGAGAT 60
TTCAAGGGCC GTCGTGCTGG CATCCTCCGT GCTCTCACCA CCGATGTGAA AGAGTTTTTC 120
CAGCAATGCA ATCCTGAGAA GGACAACCTT TGCTTGTATG GATTCCCGAA TGAAGTGTGG 180
GAAGTTAACT TACCAGCTGA AGAAGTGCCT CCTGAGCTCC CTGAGCCTGC GCTCGGCATC 240
AACTTTGCTA GAGATGGAAT GCAGGAAAAA GAGTGGATTT CTCTTGTTGC TGTCCACAGT 300
GATGCCTGGT TGCTTTCTGT CTCCTTTTAC TTCGGTTCAA GATTTGGTTT CGATAAAGCT 360
GACAGGAAGC GCTTGTTTAA CATGATAAAC GAGGTTCCTA CTGTATTTGA AGTTGTAACT 420
GGAAGTGCGA AGAAACAAAC AGAGGAACAG CCTTCTTCAG TAAACAGAAA TGGCAACAGA 480
TCCAAGTCTA ATTCAAAAGT GAGAGATTTA GAAGTCAAAA GCTCAAGGAC AATAGAGGTC 540
AACGACGAGG AGGAAGGAGT AGAGGAAGAG GAAGAGGATG AAGAGGAACA CGGTGAGACC 600
CTATGTGGAG CTTGTGGAGA TAACTATGCA TCTGATTTCT GGATTTGCTG CGACATGTGC 660
GAGAAATGGT TTCATGGGAA GTGTGTGAAG ATCACTCCAG CTAGAGCGGA GCATATCAAG 720
CAATACAAGT GCCCTTCTTG CAGCAACAAA AGAGCTCGTC CCTAA 766
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 93 2e-108 389
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 85 1e-95 346
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 83 2e-94 342
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 80 4e-92 334
WERAM-Thc-0077 EOY27191 Theobroma cacao 80 5e-91 331
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 79 4e-90 328
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 79 2e-89 325
WERAM-Prp-0082 EMJ27202 Prunus persica 76 4e-88 321
WERAM-Met-0013 KEH39913 Medicago truncatula 71 1e-85 313
WERAM-Amt-0088 ERM99796 Amborella trichopoda 73 1e-85 313
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 72 8e-85 310
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 71 8e-85 310
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 69 2e-80 296
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 64 1e-79 293
WERAM-Sei-0086 Si023009m Setaria italica 65 9e-79 290
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 64 3e-78 288
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 63 4e-78 288
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 66 7e-78 287
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 64 2e-77 286
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 67 2e-77 285
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 65 2e-77 285
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 64 3e-77 285
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 64 5e-77 284
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 64 5e-77 284
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 64 5e-77 284
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 64 5e-77 284
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 64 5e-77 284
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 64 5e-77 284
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 64 5e-77 284
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 63 3e-76 282
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 68 4e-76 281
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 4e-74 275
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 67 8e-70 260
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 67 2e-68 256
Created Date 25-Jun-2016