WERAM Information

Tag Content
WERAM ID WERAM-Brr-0011
Ensembl Protein ID Bra002307.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra002307 Bra002307.1 Bra002307.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.10e-12 47.1 206 256
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C +Cg++++ ++++++Cd C++wfH++Cvk++  +++  k++ CpsC +
  Bra002307.1-P 206 TLCGACGDNYASDEFWICCDMCEKWFHGTCVKITPARAEHIKHYKCPSCSN 256
                    78*****9999999********************666664479******86 PP
Protein Sequence
(Fasta)		MEGGGGGAQY NPRTVEEVFR DFKGRRAAIL RALTTDVQEF FQQCDPEKDN LCLYGFPNEV 60
WEVNLPAEEV PPELPEPALG INFARDGMME KDWLSLVAVH SDAWLLSVSF FFGSKFGFDK 120
VDRKRLFNMI NEVPTIFEVV TGTAKNQTKE KASSANQNGN RSKSNSKVRG LDGKSSKTIQ 180
AMEEGGLEEE EEEKEKEEDE EEHGETLCGA CGDNYASDEF WICCDMCEKW FHGTCVKITP 240
ARAEHIKHYK CPSCSNKRAR PQNVLFHLLV LAIYLSIHHP KL 282
Nucleotide Sequence
(Fasta)		ATGGAAGGAG GAGGAGGAGG TGCGCAGTAC AACCCTCGAA CTGTTGAAGA AGTCTTCCGA 60
GATTTCAAGG GCCGTCGAGC TGCCATCCTC CGAGCTCTCA CCACTGATGT GCAAGAGTTT 120
TTCCAGCAAT GCGACCCTGA GAAGGACAAT CTTTGCTTGT ATGGATTCCC AAATGAAGTG 180
TGGGAAGTTA ACTTACCAGC TGAAGAAGTA CCTCCAGAAC TCCCCGAACC TGCACTCGGC 240
ATCAACTTTG CCAGAGATGG AATGATGGAA AAGGACTGGC TTTCTCTCGT TGCTGTCCAC 300
AGTGATGCCT GGTTACTTTC TGTCTCCTTT TTCTTCGGTT CAAAATTTGG TTTTGATAAA 360
GTTGACAGGA AGCGTTTGTT CAACATGATA AATGAGGTTC CTACTATATT TGAAGTTGTG 420
ACTGGAACTG CGAAAAACCA AACAAAGGAA AAGGCCTCTT CAGCAAATCA AAATGGCAAC 480
AGATCCAAGT CAAATTCAAA AGTGAGAGGT TTAGATGGCA AAAGCTCAAA GACAATACAA 540
GCCATGGAGG AAGGAGGACT AGAGGAAGAG GAAGAGGAGA AAGAAAAGGA AGAGGATGAA 600
GAGGAACACG GCGAAACACT GTGTGGAGCT TGTGGAGATA ACTATGCTTC CGATGAATTC 660
TGGATATGCT GTGACATGTG CGAGAAATGG TTCCATGGGA CATGTGTGAA GATCACTCCA 720
GCTAGAGCTG AGCATATCAA GCACTACAAG TGCCCTTCTT GCAGCAACAA AAGAGCCCGA 780
CCCCAAAATG TTTTATTCCA CTTATTAGTC TTAGCTATCT ATCTTTCTAT CCATCACCCA 840
AAATTGTAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0179 Bo9g151850.1 Brassica oleracea 97 2e-107 385
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 89 4e-102 368
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 85 2e-97 352
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 80 2e-90 329
WERAM-Prp-0082 EMJ27202 Prunus persica 77 2e-88 322
WERAM-Thc-0077 EOY27191 Theobroma cacao 79 3e-85 311
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 79 5e-85 311
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 76 4e-84 308
WERAM-Amt-0032 ERN11177 Amborella trichopoda 74 5e-83 305
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 72 5e-82 301
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 71 4e-80 295
WERAM-Met-0013 KEH39913 Medicago truncatula 73 2e-79 292
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 68 2e-77 286
WERAM-Sei-0086 Si023009m Setaria italica 66 3e-77 285
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 66 2e-76 282
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 66 3e-76 282
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 65 5e-76 281
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 65 5e-76 281
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 65 5e-76 281
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 65 5e-76 281
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 65 5e-76 281
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 65 5e-76 281
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 65 5e-76 281
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 66 6e-76 281
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 65 3e-75 279
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 64 4e-75 278
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 65 8e-75 277
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 65 1e-74 276
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 63 1e-73 273
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 67 9e-73 270
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 2e-72 270
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 64 1e-70 263
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 64 7e-70 261
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 68 2e-64 242
Created Date 25-Jun-2016