WERAM Information

Tag Content
WERAM ID WERAM-Bro-0060
Ensembl Protein ID Bo3g127230.1
Gene Name AL3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo3g127230 Bo3g127230.1 Bo3g127230.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.10e-11 44.8 197 249
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCg..kddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   t+C +Cg  +    ++++++Cd C+ wfH+kCvk++  +++  k++ Cp C +
  Bo3g127230.1 197 TLCGACGdgDGTGTDDFWICCDVCEVWFHGKCVKITPARAEHIKQYKCPACSN 249
                   78****62233333667*******************666664479******86 PP
Protein Sequence
(Fasta)		MEGGAGLSNP RTVEEVFRDF KGRRAAIVKA LTSDVGEFYQ QCDPEKENLC LYGLPNEQWE 60
VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD TWLLSVSFYF GSRFAFDKAD 120
RKRLFDMING VPTIFEVVTG NMKKQTKEKS SAANRNGNLS KSDSKVISSD GKNSKAMQAN 180
NEEDGSEEED EDEHGETLCG ACGDGDGTGT DDFWICCDVC EVWFHGKCVK ITPARAEHIK 240
QYKCPACSNK RARP 254
Nucleotide Sequence
(Fasta)		ATGGAAGGAG GAGCTGGTCT CTCCAATCCT CGCACCGTCG AAGAAGTTTT CAGGGATTTC 60
AAAGGCCGTA GAGCCGCCAT TGTCAAAGCT CTCACCTCCG ATGTTGGAGA GTTTTACCAG 120
CAATGCGACC CTGAGAAAGA GAATCTTTGC TTGTATGGGT TACCAAACGA ACAATGGGAA 180
GTTAACTTAC CAGCTGAAGA AGTGCCTCCA GAGCTTCCAG AGCCAGCTCT AGGCATTAAC 240
TTTGCAAGAG ATGGACTTTC TGAGAAGGAA TGGCTTTCTC TTGTTGCTAT CCACAGCGAC 300
ACTTGGTTGC TCTCAGTCTC TTTTTACTTC GGGTCCAGAT TCGCTTTCGA CAAAGCTGAT 360
AGGAAACGCT TGTTTGATAT GATCAATGGG GTTCCTACCA TATTTGAAGT AGTCACTGGA 420
AATATGAAAA AGCAAACAAA GGAAAAGTCC TCTGCTGCAA ATCGAAATGG CAATCTATCC 480
AAGTCTGATT CGAAAGTGAT ATCTTCAGAT GGCAAAAACT CAAAGGCAAT GCAGGCAAAC 540
AATGAGGAAG ATGGATCAGA GGAAGAGGAT GAGGATGAAC ACGGGGAAAC CCTTTGTGGT 600
GCTTGTGGAG ACGGTGATGG TACTGGTACT GATGATTTCT GGATCTGCTG TGACGTTTGT 660
GAGGTATGGT TCCATGGGAA GTGTGTGAAG ATAACTCCAG CTAGAGCTGA ACATATCAAA 720
CAGTACAAGT GCCCTGCATG TAGCAACAAA AGAGCACGAC CTTAA 766
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0172 Bra034950.1-P Brassica rapa 98 1e-115 413
WERAM-Arl-0088 fgenesh2_kg.5__ 761__ AT3G42790.1 Arabidopsis lyrata 82 1e-96 349
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 81 2e-95 345
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 77 1e-91 333
WERAM-Thc-0077 EOY27191 Theobroma cacao 78 3e-88 321
WERAM-Prp-0082 EMJ27202 Prunus persica 72 8e-88 320
WERAM-Amt-0032 ERN11177 Amborella trichopoda 73 2e-86 316
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 72 2e-85 312
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 75 2e-84 309
WERAM-Mua-0059 GSMUA_Achr3P16750_001 Musa acuminata 72 8e-84 307
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 71 3e-82 301
WERAM-Met-0044 KEH37528 Medicago truncatula 67 1e-81 299
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 70 4e-78 288
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 66 7e-77 283
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 64 3e-76 281
WERAM-Sei-0086 Si023009m Setaria italica 65 9e-76 280
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 67 1e-75 279
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 67 2e-75 279
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 67 2e-75 279
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 67 2e-75 279
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 67 2e-75 279
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 67 2e-75 279
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 67 2e-75 279
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 63 2e-75 278
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 65 3e-75 278
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 65 4e-75 278
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 66 6e-75 277
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 66 2e-74 276
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 66 1e-73 273
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 64 1e-73 273
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 2e-73 272
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 65 7e-71 264
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 63 2e-68 256
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 67 2e-66 249
Created Date 25-Jun-2016