WERAM Information

Tag Content
WERAM ID WERAM-Arl-0139
Ensembl Protein ID scaffold_602752.1
Gene Name AL4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_602752.1 scaffold_602752.1 scaffold_602752.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.00e-13 48.9 201 251
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        t C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  scaffold_602752.1 201 TQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 251
                        67********************************666664479******86 PP
Protein Sequence
(Fasta)		MDAGGAYNPR TVEEVFRDFK GRRAGMIKAL TTDVQEFFRL CDPEKENLCL YGHPNEHWEV 60
NLPAEEVPPE LPEPVLGINF ARDGMAEKDW LSLVAVHSDA WLLAVAFFFG ARFGFDKADR 120
KRLFNMVNDL PTIFEVVAGT AKKQGKDKSS VSNNSSNRSK SSSKRGSESR ARFSKPVPKD 180
EDEEEEEEGV EEEDDDEQGE TQCGACGESY AADEFWICCD LCEMWFHGKC VKITPARAEH 240
IKQYKCPSCS NKRARS 256
Nucleotide Sequence
(Fasta)		CTCGTCTCTT TGAAGCTGAG ATGGACGCAG GTGGCGCGTA CAATCCACGC ACTGTTGAAG 60
AGGTGTTTAG GGATTTTAAG GGTCGTAGAG CTGGCATGAT TAAGGCTTTA ACCACTGATG 120
TTCAGGAGTT TTTCCGGCTT TGTGATCCCG AAAAGGAGAA CCTTTGCCTT TATGGCCATC 180
CCAATGAGCA CTGGGAGGTC AATTTGCCAG CTGAAGAGGT TCCCCCGGAG CTCCCAGAGC 240
CTGTCTTGGG TATAAACTTT GCCCGAGACG GGATGGCGGA AAAGGATTGG CTGTCCCTTG 300
TTGCTGTCCA CAGTGATGCC TGGCTTCTTG CTGTTGCTTT CTTTTTTGGA GCCAGGTTTG 360
GATTTGACAA AGCTGATAGG AAGAGGCTTT TCAATATGGT GAATGACCTC CCAACAATTT 420
TCGAGGTTGT GGCTGGCACT GCTAAGAAAC AAGGAAAGGA TAAGTCCTCT GTTTCCAACA 480
ACAGCAGCAA CAGATCCAAA TCAAGCTCCA AGCGAGGATC TGAATCCCGT GCCAGGTTCT 540
CAAAGCCAGT GCCCAAAGAT GAAGATGAAG AGGAAGAAGA GGAAGGTGTG GAAGAGGAGG 600
ATGATGATGA GCAAGGTGAA ACACAGTGTG GGGCATGTGG TGAGAGCTAT GCAGCTGATG 660
AGTTCTGGAT TTGCTGTGAC CTCTGTGAGA TGTGGTTTCA TGGAAAGTGT GTGAAGATAA 720
CACCAGCAAG GGCTGAGCAC ATCAAGCAAT ACAAGTGCCC ATCTTGCAGC AACAAGAGGG 780
CTCGTTCCTA AACTTGTGGC CGCTTCTGTG TA 813
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0130 AT5G26210.1 Arabidopsis thaliana 94 7e-97 350
WERAM-Bro-0167 Bo9g011050.1 Brassica oleracea 88 1e-89 326
WERAM-Brr-0184 Bra036568.1-P Brassica rapa 88 8e-89 323
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 81 3e-85 311
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 80 2e-82 302
WERAM-Thc-0105 EOY30333 Theobroma cacao 80 3e-82 302
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 80 4e-82 301
WERAM-Prp-0082 EMJ27202 Prunus persica 80 5e-82 301
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 75 3e-80 295
WERAM-Amt-0088 ERM99796 Amborella trichopoda 76 7e-79 290
WERAM-Met-0013 KEH39913 Medicago truncatula 78 1e-78 290
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 71 2e-77 286
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 69 9e-75 277
WERAM-Sei-0086 Si023009m Setaria italica 68 5e-74 274
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 70 3e-73 272
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 68 3e-73 271
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 68 4e-73 271
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 67 1e-72 270
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 67 1e-72 270
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 67 1e-72 270
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 67 1e-72 270
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 67 1e-72 270
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 67 1e-72 270
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 67 1e-72 270
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 68 2e-72 269
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 67 4e-72 268
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 66 6e-72 267
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 68 1e-71 266
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 65 5e-71 265
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 67 1e-70 263
WERAM-Aet-0106 EMT19247 Aegilops tauschii 67 3e-69 259
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 66 4e-69 258
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 64 1e-67 253
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 68 3e-62 235
Created Date 25-Jun-2016