WERAM Information

Tag Content
WERAM ID WERAM-Sob-0068
Ensembl Protein ID Sb04g009060.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g009060 Sb04g009060.1 Sb04g009060.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.80e-25 89.6 373 443
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    +h++ ++F++pvdp  l ++dY++iik+PmdL ti+ rl  g+Y++p+ef++Dvrl f+Na++yn+++++v
  Sb04g009060.1 373 KHKFGWVFNKPVDPVaLGLHDYFTIIKHPMDLGTIRGRLSHGQYRNPKEFAEDVRLTFHNAMTYNPKGQDV 443
                    799****************************************************************9987 PP
Protein Sequence
(Fasta)		MASDPPGDGA GGEEPTPEPA PAVEAPPAPA VPPRSRWAEE IKVYTRKHPR KNPKPPPPEP 60
APGPSPASAP APAPAPAPAP APAPAPAPAP APAPASAPVP APAPAPVPAQ APNPLSETLS 120
SIRRNIRRAE AAGAAARPDP AAPASAPTRT PSGERGAASG DPSSGLNRVG GRIPNGHGDD 180
QAAAAAEKAE KARKRRVRSE LRRRLAGELD QVRVLSKRLK EAAEALAQRE ASEPAPLPLM 240
VLPTQQQVVE AGYVQPHFSA GDMAVPMSAQ VAAAVTPGRT LLQRRPLTVS VIHNEAFEKE 300
KRTPKANQLY QNSEFLLAKD RIPPADSHGR KKSKHHKKKH RSLESRGADF DAERRLYSHA 360
FKKSSSLLSR LMKHKFGWVF NKPVDPVALG LHDYFTIIKH PMDLGTIRGR LSHGQYRNPK 420
EFAEDVRLTF HNAMTYNPKG QDVHFMAEQL SGIFEAQWPE IEAEVNYLAS CPPLPKKFPP 480
PPIDLRFLER SDSMRHHMAL DTNSRPISHT PTYTRTPSMK KPRAKDPNKR DMTIDEKRKL 540
SENLQNLPPE KLDAVVQVIK NKNLSVMQHD DEIEVEIDSM DAETLWELDR FVANYKKNLS 600
KQKRKAERAM LARQDAELRA QHQHQHQHPI QPPQPISATQ EPVGEKSPKQ AAKG 654
Nucleotide Sequence
(Fasta)		ATGGCTTCCG ACCCTCCCGG CGACGGCGCC GGCGGGGAGG AGCCGACGCC GGAACCTGCC 60
CCCGCCGTGG AGGCGCCGCC TGCTCCCGCC GTTCCGCCCA GGTCGCGCTG GGCCGAGGAG 120
ATCAAGGTCT ACACCCGTAA GCACCCCCGC AAAAACCCTA AACCTCCTCC TCCAGAACCA 180
GCTCCCGGCC CCTCCCCCGC CTCCGCCCCC GCCCCCGCCC CCGCTCCTGC TCCTGCTCCT 240
GCTCCCGCTC CCGCCCCCGC CCCCGCCCCT GCTCCTGCCC CTGCCTCCGC CCCTGTTCCT 300
GCCCCCGCCC CCGCCCCCGT TCCTGCGCAG GCCCCGAATC CCCTTTCCGA AACCTTATCC 360
TCGATTCGCC GCAACATCCG CCGCGCGGAG GCGGCAGGCG CTGCGGCGCG GCCCGATCCG 420
GCAGCGCCGG CCTCGGCTCC CACCCGGACC CCGTCTGGGG AACGCGGTGC CGCCTCGGGG 480
GACCCCTCAT CCGGGCTGAA CCGGGTCGGC GGCCGTATTC CTAACGGCCA CGGGGACGAC 540
CAGGCGGCCG CTGCAGCTGA GAAGGCTGAG AAAGCACGGA AGCGCAGGGT GAGGAGTGAG 600
CTGCGGCGCC GGCTGGCGGG GGAGCTGGAC CAGGTCCGCG TGCTCTCCAA GCGGCTGAAG 660
GAGGCTGCCG AGGCCCTGGC GCAGCGGGAG GCTTCTGAGC CCGCGCCTTT GCCCTTGATG 720
GTGCTGCCAA CACAACAGCA GGTGGTGGAG GCTGGTTATG TGCAGCCACA TTTCTCAGCT 780
GGTGATATGG CAGTGCCCAT GTCTGCTCAG GTTGCAGCTG CCGTTACTCC TGGCCGCACG 840
CTGCTGCAGC GCAGACCACT AACCGTATCC GTTATTCATA ATGAAGCCTT TGAAAAGGAG 900
AAACGGACGC CAAAGGCCAA TCAATTGTAC CAAAATTCGG AGTTCTTGCT TGCCAAGGAT 960
AGGATTCCTC CCGCAGATTC ACATGGGCGC AAGAAATCCA AGCACCACAA GAAGAAGCAT 1020
AGGTCACTAG AATCTCGTGG CGCAGACTTT GATGCTGAGC GGCGGCTCTA CTCTCATGCG 1080
TTCAAGAAGT CCTCATCACT TCTGAGCCGC CTAATGAAGC ACAAGTTTGG GTGGGTGTTC 1140
AACAAGCCTG TTGATCCAGT TGCACTTGGT TTGCATGATT ATTTTACTAT TATCAAACAC 1200
CCAATGGATC TTGGCACGAT AAGGGGACGG CTCAGCCATG GGCAGTACAG GAACCCGAAG 1260
GAGTTCGCTG AGGATGTCCG GCTCACTTTC CATAATGCGA TGACATATAA CCCCAAGGGT 1320
CAGGATGTGC ATTTCATGGC GGAGCAGTTG TCAGGAATCT TTGAGGCACA GTGGCCTGAG 1380
ATTGAGGCTG AGGTTAACTA CCTCGCATCA TGTCCTCCAT TGCCGAAGAA GTTTCCACCT 1440
CCACCAATTG ACCTGCGCTT CCTAGAGAGG TCAGATTCGA TGAGACACCA CATGGCATTG 1500
GACACCAATT CAAGACCGAT CAGTCATACT CCCACTTATA CCCGGACTCC ATCAATGAAG 1560
AAACCAAGGG CAAAGGATCC AAATAAGAGG GACATGACAA TAGATGAGAA GCGTAAGCTT 1620
AGTGAGAACC TCCAGAATTT GCCGCCAGAG AAGCTTGATG CTGTTGTGCA AGTCATTAAG 1680
AACAAGAACC TATCAGTTAT GCAGCATGAT GATGAGATTG AGGTTGAAAT TGATAGCATG 1740
GATGCTGAGA CACTTTGGGA GCTTGACAGG TTTGTGGCCA ACTACAAGAA GAACCTGAGC 1800
AAGCAAAAGA GAAAGGCTGA GCGAGCGATG CTTGCCAGAC AAGATGCAGA GTTGCGTGCA 1860
CAGCACCAGC ACCAGCACCA GCACCCTATA CAACCACCGC AACCAATCTC AGCCACCCAA 1920
GAACCTGTTG GTGAAAAATC TCCAAAGCAA GCTGCGAAAG GTTAG 1966
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0012 GRMZM2G010075_P01 Zea mays 92 0.0 770
WERAM-Sei-0047 Si013421m Setaria italica 86 0.0 718
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 75 4e-177 619
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 75 1e-175 614
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 72 5e-174 608
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 76 1e-171 600
WERAM-Aet-0072 EMT26738 Aegilops tauschii 76 1e-168 590
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 74 2e-167 587
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 74 6e-167 585
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 74 7e-167 585
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 74 2e-166 583
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 74 2e-166 583
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 75 3e-165 579
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 75 1e-164 577
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 76 3e-163 572
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 81 7e-159 558
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 83 2e-151 533
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 83 4e-151 532
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 53 6e-95 345
WERAM-Thc-0011 EOX94205 Theobroma cacao 55 4e-94 343
WERAM-Prp-0041 EMJ12560 Prunus persica 56 2e-93 340
WERAM-Met-0054 KEH39252 Medicago truncatula 55 7e-92 335
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 50 7e-92 335
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 46 2e-88 324
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 62 1e-84 311
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 53 5e-84 309
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 47 3e-83 306
WERAM-Amt-0025 ERN13953 Amborella trichopoda 44 2e-81 301
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 50 8e-80 295
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 59 4e-79 293
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 50 6e-79 292
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 51 9e-76 282
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 51 6e-75 279
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 44 2e-59 228
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 38 5e-45 180
Created Date 25-Jun-2016