WERAM Information

Tag Content
WERAM ID WERAM-Pot-0077
Ensembl Protein ID POPTR_0006s14760.1
Gene Name POPTR_0006s14760g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0006s14760 POPTR_0006s14760.1 POPTR_0006s14760.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.90e-12 48.3 200 250
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  POPTR_0006s14760.1 200 TLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSN 250
                         78*****999999*********************666664479******86 PP
Protein Sequence
(Fasta)		MDGGAQYNPR TVEEVFRDLK GRRAGMIKAL TTDVEEFYQR CDPEKENLCL YGFPNEQWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDA WLLAVAFYFG SRFGFDKTDR 120
QKRKGKRLFT MINDLPTIFE IVTGAVKKQA KEKSSVSNHS SNKSKSSSKG RASDSVKYLK 180
GQPKDEEEGL DEEEEEHGDT LCGACGENYA ADEFWICCDI CEKWFHGKCV KITPARAEHI 240
KQYKCPSCSN KRARP 255
Nucleotide Sequence
(Fasta)		CTTAAAATCT GATTTGAAGG ATGGAAGAAC ACCCTCCCAG TCTCAGATGA TGATGATTGC 60
CGAAAAAATA TTAAAAACTA CTACTTGAGC TGAAGGAAGG AAGGAAGCAA ACAACAAATT 120
GGCACAATTT GTTTGTTTGA ATTGTACGGA AAAATGGACG GAGGCGCCCA GTACAACCCC 180
CGAACTGTAG AGGAGGTTTT CAGGGATCTT AAAGGCCGTA GAGCTGGAAT GATCAAAGCC 240
CTAACTACTG ATGTAGAAGA ATTTTATCAG CGGTGTGATC CTGAGAAGGA GAATCTTTGC 300
CTGTATGGGT TCCCTAATGA ACAGTGGGAA GTCAATTTAC CTGCTGAAGA AGTGCCTCCC 360
GAACTCCCAG AGCCTGCACT TGGAATTAAC TTTGCCAGAG ATGGGATGCA AGAAAAAGAC 420
TGGCTCTCTC TAGTTGCTGT TCATAGTGAC GCGTGGTTGC TTGCTGTGGC TTTCTACTTT 480
GGCTCTAGAT TTGGTTTTGA TAAAACTGAT AGGCAAAAGA GAAAAGGGAA ACGTCTTTTC 540
ACTATGATAA ATGATCTCCC AACAATATTT GAGATTGTAA CTGGAGCTGT GAAGAAACAA 600
GCAAAGGAGA AATCATCCGT CTCAAATCAT AGCAGCAACA AGTCCAAGTC AAGCTCAAAA 660
GGGCGAGCAT CAGATTCTGT CAAGTATTTG AAGGGGCAAC CAAAGGATGA GGAGGAAGGA 720
CTGGATGAGG AGGAGGAGGA GCACGGGGAT ACTTTGTGTG GGGCGTGTGG AGAGAACTAT 780
GCTGCAGATG AGTTCTGGAT TTGTTGCGAC ATATGTGAAA AGTGGTTCCA TGGCAAGTGC 840
GTGAAAATCA CTCCTGCCAG GGCTGAGCAC ATCAAGCAGT ACAAATGCCC ATCATGCAGC 900
AACAAGAGAG CTAGACCTTG ATATTAATAT GGGTAAATCA ACTAAAGAAG ACATTATATA 960
GGAATTAAAA TGAGAATTCT TATCCCACTG TCGATTCCTT AGCAAACAAA GCATTGAAGT 1020
GGGTAGATTT GCCAGATAAG GTCTGCAGCA TAACAAAGCT CTTTCAAGTA TGTGTTCGTC 1080
TATATATATG TATGTATGCA TGCA 1105
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 89 1e-96 349
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 86 1e-93 339
WERAM-Thc-0077 EOY27191 Theobroma cacao 85 2e-93 339
WERAM-Prp-0082 EMJ27202 Prunus persica 81 2e-92 335
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 78 1e-89 326
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 75 2e-89 326
WERAM-Amt-0088 ERM99796 Amborella trichopoda 79 2e-88 322
WERAM-Met-0172 KEH18446 Medicago truncatula 78 3e-86 315
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 74 6e-86 314
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 75 3e-84 308
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 73 4e-84 308
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 72 2e-83 306
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 65 8e-82 300
WERAM-Sei-0118 Si030765m Setaria italica 65 3e-80 295
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 70 6e-79 291
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 70 6e-79 291
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 70 6e-79 291
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 70 6e-79 291
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 70 6e-79 291
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 70 6e-79 291
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 70 6e-79 291
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 70 6e-79 291
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 70 1e-78 290
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 70 2e-78 289
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 70 2e-78 289
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 67 2e-78 288
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 69 9e-78 287
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 65 1e-77 286
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 65 2e-77 286
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 69 7e-76 280
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 3e-75 278
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 68 1e-73 273
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 67 1e-72 270
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 70 3e-69 259
Created Date 25-Jun-2016