WERAM Information

Tag Content
WERAM ID WERAM-Pot-0017
Ensembl Protein ID POPTR_0001s38550.1
Gene Name POPTR_0001s38550g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s38550 POPTR_0001s38550.1 POPTR_0001s38550.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.00e-27 96.2 44 114
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                         +h++ ++F+epvd++ l+++dYy+iik+PmdL t+k+rl ++ Y+sp+ef++Dvrl fnNa++yne++++v
  POPTR_0001s38550.1  44 KHQYGWVFNEPVDAKkLKLHDYYKIIKHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTFNNAMKYNEKGQDV 114
                         799****************************************************************9987 PP
Protein Sequence
(Fasta)		MNSNKKLKQS GGGGKDGGAG KGVVVEFSKD LVIGCGELLG KLMKHQYGWV FNEPVDAKKL 60
KLHDYYKIIK HPMDLGTVKS RLSKNWYKSP KEFAEDVRLT FNNAMKYNEK GQDVHAMADK 120
LLKIFEENWA NFKAKTNFDK RGEMGFDASL PTPALKRAPG PRASSPAHGP ASKRVPGPRA 180
SSPTSGPASA SARAPSPASF PQTMPLETKT LDRTDSLTEL VHSKMKAAKT VANQGRTSVL 240
NKPKKNETVR GVMTYEEKQK LSIHLQSLPS EKLESVVQII RKRNPGLFQQ EDEIEVDIDS 300
FDNETLWELH GYVTNYQKSM GKNEREAEVA LQGREEAGHK MLGTNMTSAT AEAPKELGSV 360
QMTVSASSPV KDHRQGHSMS RSSSSSSSGS DSRSSSSGSD SDSGSGSDAA Q 411
Nucleotide Sequence
(Fasta)		CAGAACCACC GCGACGGCAC CGTGGCGTCG AACGATTCTT CCAGTCTTAA TCACGTACAG 60
CCGGTCCCAC AGAATGAGAA CAAGTCAGCA CTACCCGGGT ACGTGAGATT TGATGATGGT 120
AGTAAAGTAA AAATCAACTT GAATTCAAGG TCAAAATCTG AAATTAAACA GCTAAAGAGG 180
AAATTAGCAA GTGAACTTCA TCAAGTTAGA AGCTTGAAAA AGAAACTTGA ATCTAAAGAA 240
AAGTTTACAT CTTCTTATAA TGATAATCAT AATAATAGAA TAGGTAATAG CGGTGGTGGA 300
GGCGGTGGTA ACAGAATTGG AACTCTTGCT AGGGTTAATT CTGAAGTTAG TTATGTGGGA 360
CCCACCAATT CGCGGCTGTT GGATGGTGAT GAGAAGAAGA AAACCCAGAT GAATTCGAAC 420
AAGAAGTTGA AACAGTCTGG CGGTGGAGGG AAGGACGGTG GTGCGGGAAA GGGGGTGGTG 480
GTGGAGTTTA GCAAGGATTT GGTTATAGGG TGTGGGGAGC TGTTAGGGAA GTTGATGAAA 540
CATCAATATG GGTGGGTGTT TAATGAGCCA GTGGATGCAA AGAAGTTGAA GCTGCATGAT 600
TATTATAAGA TTATTAAGCA TCCCATGGAC TTAGGGACTG TGAAGAGTAG GTTGAGTAAG 660
AATTGGTACA AGTCTCCAAA GGAGTTTGCT GAGGATGTTA GGTTGACGTT TAATAATGCT 720
ATGAAGTATA ATGAGAAAGG GCAGGATGTG CATGCTATGG CGGATAAGTT GTTGAAGATT 780
TTTGAGGAGA ATTGGGCTAA TTTTAAGGCC AAAACTAATT TTGATAAGAG GGGGGAGATG 840
GGATTTGATG CTAGCTTGCC AACACCTGCT TTGAAGAGAG CTCCAGGTCC TCGTGCTTCG 900
TCTCCTGCTC ACGGTCCTGC TTCAAAGAGA GTTCCAGGTC CTCGTGCTTC ATCCCCCACC 960
TCTGGTCCTG CTTCTGCTTC TGCCCGTGCT CCCAGTCCTG CTTCTTTTCC ACAGACAATG 1020
CCTTTAGAGA CAAAAACTTT GGATAGGACA GATTCTTTGA CGGAGCTTGT ACATTCGAAG 1080
ATGAAAGCTG CAAAAACTGT TGCCAATCAA GGCAGGACAT CAGTGTTGAA TAAGCCTAAG 1140
AAGAATGAAA CTGTCAGAGG CGTGATGACA TACGAGGAGA AGCAGAAATT GAGTATACAC 1200
CTGCAGAGTT TGCCTTCAGA GAAACTAGAA TCAGTTGTCC AGATTATTAG GAAGAGGAAT 1260
CCTGGGCTTT TCCAACAAGA AGATGAGATT GAAGTGGATA TTGATAGTTT TGATAATGAA 1320
ACACTTTGGG AACTTCATGG TTATGTAACC AATTACCAGA AGAGTATGGG CAAGAATGAG 1380
AGAGAAGCTG AAGTTGCTCT TCAAGGGAGA GAAGAAGCTG GCCATAAAAT GCTTGGGACT 1440
AATATGACAT CTGCTACTGC AGAGGCACCA AAAGAACTTG GATCGGTACA AATGACTGTT 1500
TCTGCATCTT CTCCTGTTAA AGATCATAGG CAGGGCCATA GTATGAGCAG ATCAAGTAGT 1560
TCAAGCAGTT CTGGCAGTGA TTCCAGATCC TCTTCAAGTG GCTCTGATAG TGATTCAGGA 1620
TCTGGGTCAG ATGCAGCTCA ATGACATAGG AGTTAGTAGA TTCAAGGTAG GGGCGTCATC 1680
CTTGGTTAGA ATCTAACCAT CTCTTGTTTC TCTATCATCC ATGGTAATAC AAAAATTGCC 1740
ATTCAACGTT TACAATATTG GACATTTACC TGTCAAAGTG ATCATTATTG AAGCTTTAAC 1800
CACTCTTTA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0085 EOY13187 Theobroma cacao 52 5e-91 332
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 52 2e-86 317
WERAM-Prp-0055 EMJ15030 Prunus persica 48 3e-86 316
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 51 8e-83 305
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 48 2e-80 296
WERAM-Sot-0042 PGSC0003DMT400039787 Solanum tuberosum 51 1e-79 294
WERAM-Met-0054 KEH39252 Medicago truncatula 52 2e-78 290
WERAM-Amt-0025 ERN13953 Amborella trichopoda 46 2e-72 270
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 49 1e-71 267
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 47 2e-70 263
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 47 3e-70 263
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 48 3e-70 263
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 47 1e-69 261
WERAM-Mua-0014 GSMUA_Achr10P27900_001 Musa acuminata 44 2e-69 260
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 47 2e-69 260
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 46 3e-69 259
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 47 3e-69 259
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 47 5e-69 259
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 47 6e-69 258
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 46 6e-69 258
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 46 2e-68 257
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 46 3e-68 256
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 46 1e-66 251
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 46 2e-66 249
WERAM-Sei-0009 Si001167m Setaria italica 46 4e-66 249
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 46 8e-66 248
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 45 1e-65 247
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 46 5e-65 245
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 46 1e-64 244
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 46 1e-63 241
WERAM-Aet-0058 EMT09500 Aegilops tauschii 45 1e-61 234
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 63 3e-37 153
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 61 3e-36 149
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 58 2e-33 140
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 59 2e-32 137
WERAM-Dan-0098 ENSDNOP00000010335.3 Dasypus novemcinctus 34 3e-28 123
WERAM-Paa-0051 ENSPANP00000003567.1 Papio anubis 31 9e-28 122
WERAM-Orn-0042 ENSONIP00000004818.1 Oreochromis niloticus 43 9e-25 112
WERAM-Pof-0102 ENSPFOP00000009161.2 Poecilia formosa 42 1e-24 112
WERAM-Pem-0074 ENSPMAP00000008062.1 Petromyzon marinus 51 2e-24 110
WERAM-Xim-0169 ENSXMAP00000013871.1 Xiphophorus maculatus 42 3e-24 110
WERAM-Drm-0012 FBpp0071074 Drosophila melanogaster 52 4e-24 109
Created Date 25-Jun-2016