WERAM Information

Tag Content
WERAM ID WERAM-Brr-0106
Ensembl Protein ID Bra020543.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra020543 Bra020543.1 Bra020543.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.50e-12 48.5 198 248
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t C +Cg+++++++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  Bra020543.1-P 198 TACGACGETYARDEFWICCDMCENWFHGKCVKITPARAEHIKQYKCPSCSN 248
                    68********************************666664479******85 PP
Protein Sequence
(Fasta)		MNRDGAYNPR TVEEVFRDYN GRRNGMIKAL TTDVHEFHRL CDPEKENLCL YGLPSEDWEV 60
NLPAEEVPPE LPEPVLGINF ARNGMLEKDW LSLVAVHSDA WLMAVAFFFG ARFGFDKADR 120
KRLFNMVNDL PTVFEVVTDF LARKLSKEKY SVSNNSSNRS KSNSKRGGSE ARPIAKPAPK 180
EEEEEEEEND DDDEEGDTAC GACGETYARD EFWICCDMCE NWFHGKCVKI TPARAEHIKQ 240
YKCPSCSNNK RGRS 254
Nucleotide Sequence
(Fasta)		ATGAACAGAG ATGGCGCGTA CAACCCACGC ACTGTGGAGG AGGTTTTCAG AGATTATAAT 60
GGGCGTAGGA ATGGCATGAT TAAGGCTTTA ACCACCGATG TTCATGAGTT CCACCGCCTT 120
TGTGATCCCG AGAAGGAGAA CTTGTGCCTT TATGGGCTCC CTAGTGAGGA CTGGGAAGTG 180
AATCTACCAG CTGAAGAGGT TCCCCCTGAG CTCCCAGAGC CTGTTTTGGG TATCAACTTC 240
GCCCGAAACG GGATGCTGGA GAAGGACTGG CTGTCCCTCG TCGCTGTCCA CAGTGACGCA 300
TGGCTTATGG CAGTTGCTTT CTTTTTCGGA GCCAGGTTTG GCTTTGACAA AGCTGATAGG 360
AAACGCCTCT TCAATATGGT GAACGACCTG CCAACGGTTT TCGAGGTTGT GACTGACTTT 420
CTTGCTAGGA AACTGTCAAA GGAGAAATAC TCTGTTTCCA ACAACAGCAG CAACAGATCC 480
AAATCAAACT CCAAGCGAGG AGGATCAGAG GCTCGGCCCA TCGCAAAGCC AGCGCCCAAA 540
GAGGAAGAGG AGGAGGAAGA GGAGAATGAT GATGATGATG AGGAAGGTGA TACAGCGTGT 600
GGGGCATGTG GTGAGACCTA TGCACGTGAT GAGTTCTGGA TCTGCTGTGA CATGTGTGAG 660
AATTGGTTCC ATGGGAAGTG CGTGAAGATA ACGCCGGCCA GGGCTGAGCA CATCAAGCAG 720
TATAAGTGCC CATCTTGCAG CAACAACAAG AGGGGTCGGT CCTAA 766
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0039 Bo2g156000.1 Brassica oleracea 88 5e-90 327
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 77 1e-77 286
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 75 2e-77 285
WERAM-Thc-0077 EOY27191 Theobroma cacao 76 7e-77 284
WERAM-Met-0172 KEH18446 Medicago truncatula 73 8e-77 283
WERAM-Art-0130 AT5G26210.1 Arabidopsis thaliana 79 2e-76 282
WERAM-Arl-0139 scaffold_602752.1 Arabidopsis lyrata 79 2e-76 282
WERAM-Amt-0032 ERN11177 Amborella trichopoda 73 2e-75 279
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 72 2e-75 279
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 77 2e-75 279
WERAM-Prp-0082 EMJ27202 Prunus persica 68 5e-74 274
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 67 7e-73 270
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 66 2e-69 259
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 68 3e-69 259
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 62 6e-69 258
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 68 3e-68 255
WERAM-Sei-0118 Si030765m Setaria italica 60 1e-67 253
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 65 3e-67 252
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 63 9e-67 250
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 65 1e-66 250
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 65 5e-66 248
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 65 5e-66 248
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 65 5e-66 248
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 65 5e-66 248
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 65 5e-66 248
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 65 5e-66 248
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 65 5e-66 248
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 65 5e-66 248
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 61 7e-66 247
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 65 8e-66 247
WERAM-Zem-0090 GRMZM2G158918_P01 Zea mays 63 1e-65 246
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 65 3e-65 245
WERAM-Aet-0106 EMT19247 Aegilops tauschii 62 3e-64 241
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 65 1e-58 223
Created Date 25-Jun-2016