WERAM Information

Tag Content
WERAM ID WERAM-Bro-0039
Ensembl Protein ID Bo2g156000.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo2g156000 Bo2g156000.1 Bo2g156000.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.30e-11 46.1 228 278
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   t C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  Bo2g156000.1 228 TECGACGETYAPDEFWICCDMCENWFHGKCVKITPARAEHIKQYKCPSCSN 278
                   56********************************666664479******85 PP
Protein Sequence
(Fasta)		WVPSFSQHNF QSQVKGFCLL LLLSVKNTSC SVRIMNGDGA YNPRTVEEVF RDYNGRRNGM 60
IKALTTDVHE FHRLCDPEKE NLCLYGLPSE DWEVNLPAEE VPPELPEPVL GINFARNGML 120
EKDWLSLVAV HSDAWLIAVA FFFGARFGFD KADRKRLFNM VNDLPSVFEV VVEFAAKKQS 180
KEKSSVSNNS SNRSKSNSKR GGSEAGPEPK EEEVEEEESD DDEEEGDTEC GACGETYAPD 240
EFWICCDMCE NWFHGKCVKI TPARAEHIKQ YKCPSCSNNK RGRS 284
Nucleotide Sequence
(Fasta)		TGGGTCCCCT CATTCTCGCA ACACAATTTT CAGAGCCAAG TCAAAGGCTT CTGTCTTCTT 60
CTCCTTCTCT CGGTGAAGAA CACAAGCTGT TCTGTAAGAA TTATGAACGG AGATGGCGCG 120
TACAACCCAC GCACTGTGGA GGAGGTTTTC AGAGATTATA ATGGGCGTAG GAATGGCATG 180
ATTAAGGCTT TAACGACCGA TGTTCATGAG TTCCACCGCC TTTGTGATCC CGAGAAAGAG 240
AACTTGTGCC TTTATGGGCT CCCTAGTGAG GACTGGGAAG TGAATCTACC AGCTGAAGAG 300
GTTCCCCCGG AGCTCCCAGA GCCTGTCTTG GGTATCAACT TCGCCCGGAA CGGGATGCTG 360
GAGAAGGACT GGCTCTCCCT CGTTGCTGTC CACAGTGACG CATGGCTTAT CGCAGTTGCT 420
TTCTTTTTCG GAGCCAGGTT TGGCTTTGAC AAAGCTGATA GGAAACGCCT CTTCAATATG 480
GTGAACGACC TCCCATCGGT TTTCGAGGTT GTGGTTGAAT TTGCTGCTAA GAAACAGTCA 540
AAGGAGAAAT CCTCTGTTTC CAACAACAGC AGCAACAGAT CCAAATCAAA CTCCAAGCGA 600
GGAGGATCAG AGGCTGGGCC AGAGCCCAAA GAGGAAGAGG TGGAGGAAGA GGAGAGTGAT 660
GATGATGAGG AGGAAGGTGA TACAGAGTGT GGGGCATGTG GTGAGACCTA TGCACCTGAT 720
GAGTTCTGGA TCTGCTGTGA CATGTGTGAG AATTGGTTCC ATGGGAAGTG CGTGAAGATA 780
ACGCCGGCCA GGGCTGAGCA CATCAAGCAG TATAAGTGCC CGTCTTGCAG CAACAACAAG 840
AGGGGTCGTT CCTAA 856
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 74 3e-67 252
WERAM-Thc-0077 EOY27191 Theobroma cacao 69 4e-67 252
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 69 3e-66 249
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 68 8e-65 244
WERAM-Met-0172 KEH18446 Medicago truncatula 63 6e-63 238
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 64 1e-62 237
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 63 2e-62 236
WERAM-Arl-0088 fgenesh2_kg.5__ 761__ AT3G42790.1 Arabidopsis lyrata 63 5e-62 234
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 63 4e-60 228
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 58 1e-57 220
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 59 3e-57 219
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 63 1e-56 216
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 62 2e-56 216
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 63 3e-56 215
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 60 6e-56 214
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 63 1e-55 214
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 63 1e-55 213
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 63 1e-55 213
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 63 1e-55 213
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 63 1e-55 213
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 63 1e-55 213
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 63 1e-55 213
WERAM-Prp-0081 EMJ24886 Prunus persica 58 3e-55 212
WERAM-Sei-0012 Si002638m Setaria italica 59 5e-55 211
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 58 3e-54 209
WERAM-Brd-0058 BRADI2G57280.2 Brachypodium distachyon 60 1e-53 207
WERAM-Sol-0130 Solyc10g085180.1.1 Solanum lycopersicum 56 1e-46 183
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 58 4e-46 182
WERAM-Amt-0088 ERM99796 Amborella trichopoda 80 6e-45 178
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 81 2e-43 173
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 81 3e-43 172
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 72 1e-40 164
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 75 4e-40 162
WERAM-Aet-0106 EMT19247 Aegilops tauschii 73 5e-39 158
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 56 9e-36 147
Created Date 25-Jun-2016