WERAM Information

Tag Content
WERAM ID WERAM-Bro-0030
Ensembl Protein ID Bo2g043340.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo2g043340 Bo2g043340.1 Bo2g043340.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.40e-12 49.1 40 89
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt  2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51
                  t+C +Cg++++ ++++++Cd C++wfH++Cvk++  +++  k++ CpsC 
  Bo2g043340.1 40 TLCGACGENYAADEFWICCDMCEKWFHGTCVKITPARAEHIKHYKCPSCS 89
                  78*****999999*********************666664479******6 PP
Protein Sequence
(Fasta)		MQKGLDGKSS KTMEAMDEEE EGPEEEEEEK EEDEEEHGET LCGACGENYA ADEFWICCDM 60
CEKWFHGTCV KITPARAEHI KHYKCPSCSI KRARP 95
Nucleotide Sequence
(Fasta)		ATGCAGAAAG GTTTAGATGG CAAAAGTTCA AAGACAATGG AAGCCATGGA CGAGGAGGAA 60
GAAGGACCAG AGGAAGAAGA AGAGGAAAAG GAAGAGGATG AAGAGGAACA CGGTGAAACA 120
CTGTGTGGAG CTTGTGGAGA AAACTATGCT GCTGATGAAT TCTGGATATG CTGTGACATG 180
TGCGAGAAAT GGTTCCATGG GACATGTGTA AAGATCACTC CAGCTAGAGC TGAGCATATC 240
AAGCATTACA AGTGCCCTTC TTGCAGCATC AAAAGAGCTC GACCCTAA 289
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0011 Bra002307.1-P Brassica rapa 86 3e-33 136
WERAM-Thc-0104 EOY29997 Theobroma cacao 95 1e-30 127
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 81 2e-29 124
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 78 2e-28 120
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 91 1e-27 118
WERAM-Glm-0102 GLYMA09G07970.1 Glycine max 91 2e-27 117
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 91 2e-27 117
WERAM-Prp-0082 EMJ27202 Prunus persica 89 4e-27 116
WERAM-Mua-0096 GSMUA_Achr6P28820_001 Musa acuminata 88 7e-27 115
WERAM-Orl-0078 KN539672.1_FGP003 Oryza longistaminata 78 2e-26 114
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 91 2e-26 114
WERAM-Met-0013 KEH39913 Medicago truncatula 88 3e-26 113
WERAM-Amt-0088 ERM99796 Amborella trichopoda 89 4e-26 113
WERAM-Sol-0079 Solyc06g062850.2.1 Solanum lycopersicum 89 8e-26 112
WERAM-Brd-0116 BRADI4G40230.1 Brachypodium distachyon 81 8e-24 105
WERAM-Orgl-0077 OGLUM07G21650.1 Oryza glumaepatula 71 3e-23 103
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 81 3e-23 103
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 81 4e-23 103
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 81 4e-23 103
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 81 4e-23 103
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 81 4e-23 103
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 81 4e-23 103
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 81 4e-23 103
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 81 4e-23 103
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 81 4e-23 103
WERAM-Zem-0065 GRMZM2G107807_P01 Zea mays 80 5e-23 102
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 80 5e-23 102
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 82 5e-23 102
WERAM-Sei-0086 Si023009m Setaria italica 80 6e-23 102
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 80 6e-23 102
WERAM-Aet-0106 EMT19247 Aegilops tauschii 80 7e-23 102
WERAM-Orp-0077 OPUNC07G20290.1 Oryza punctata 71 8e-23 102
WERAM-Tra-0027 Traes_1DL_4F47319EC.1 Triticum aestivum 80 8e-23 102
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 80 1e-21 97.8
Created Date 25-Jun-2016