WERAM Information

Tag Content
WERAM ID WERAM-Arl-0088
Ensembl Protein ID fgenesh2_kg.5__761__AT3G42790.1
Gene Name AL3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.5__761__AT3G42790.1 fgenesh2_kg.5__761__AT3G42790.1 fgenesh2_kg.5__761__AT3G42790.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.40e-13 51.5 195 245
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
                          PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                                      t+C +Cg++d  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  fgenesh2_kg.5__761__AT3G42790.1 195 TLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQYKCPSCSN 245
                                      78****999999999*******************666664479******86 PP
Protein Sequence
(Fasta)		MEGGAALYNP RTVEEVFKDF KGRRAAIVKA LTTDVQEFYQ QCDPEKENLC LYGLPNEEWE 60
VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD AWLLSVSFYF GSRFSFYKEE 120
RKRLFNMIND VPTIFEVVTG MAKAKDKSSA ANQNGNKSKS NSKVRTSEGK SSKTMQPKEE 180
DEGIDEDDED DHGETLCGAC GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC 240
PSCSNKRARA
Nucleotide Sequence
(Fasta)		TAGAAGAAAA ACAAGATCGG GTCTCGTCAC GGTCCACGCC GCAGCTTTTT CTTCGTCTTC 60
TTCCATTATT CTATTTCTCT GAGAGATTCT CTCTGAGTTT CTGAGATCGA GCGAGATCAT 120
GGAAGGTGGA GCTGCTCTTT ACAATCCTCG AACTGTTGAA GAAGTTTTTA AGGATTTCAA 180
AGGTCGTCGT GCTGCCATTG TCAAAGCTCT CACCACCGAT GTTCAAGAGT TTTACCAACA 240
ATGTGACCCT GAAAAGGAGA ATCTTTGTTT GTATGGGTTA CCGAATGAAG AATGGGAAGT 300
GAATTTACCA GCTGAAGAAG TGCCTCCTGA GCTACCAGAG CCAGCTCTTG GTATTAACTT 360
TGCTAGAGAT GGTCTCTCTG AAAAAGAATG GCTTTCTCTT GTTGCTATTC ACAGTGATGC 420
TTGGTTACTT TCTGTCTCGT TTTACTTTGG CTCAAGGTTT TCTTTCTACA AGGAGGAAAG 480
GAAGCGCTTG TTCAACATGA TCAATGATGT TCCTACTATA TTTGAAGTAG TGACTGGAAT 540
GGCCAAAGCC AAGGACAAGT CATCTGCTGC CAATCAAAAC GGAAACAAGT CCAAGTCGAA 600
CTCAAAAGTT AGAACTTCAG AAGGCAAAAG CTCAAAGACC ATGCAGCCAA AAGAGGAGGA 660
CGAAGGAATA GATGAAGATG ATGAGGATGA CCACGGCGAA ACCCTTTGTG GAGCCTGTGG 720
AGACAGTGAT GGTGCTGATG AATTCTGGAT CTGCTGTGAC CTTTGTGAGA AGTGGTTCCA 780
TGGCAAGTGT GTGAAGATCA CTCCAGCTAG AGCTGAGCAT ATCAAACAAT ACAAGTGCCC 840
TTCATGCAGC AACAAAAGAG CACGAGCTTA AATGTTCTAT TGTAGTGAAT AGCCTGTAGT 900
GACAACTCTC ACTACCCTCT GTCTTTATTT GGCTAGTCTT AGCGCTTTAT TGGCCATAAC 960
AGCTTGGGCC TATTTCTCTG TATAATTGGT TTGATTTTGC AACTGAGAAA AAAAAAA 1018
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 98 6e-111 397
WERAM-Thc-0077 EOY27191 Theobroma cacao 80 6e-90 327
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 73 1e-88 323
WERAM-Brr-0172 Bra034950.1-P Brassica rapa 82 1e-88 323
WERAM-Bro-0060 Bo3g127230.1 Brassica oleracea 82 1e-87 319
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 72 3e-87 318
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 79 7e-87 317
WERAM-Mua-0059 GSMUA_Achr3P16750_001 Musa acuminata 71 3e-86 315
WERAM-Amt-0088 ERM99796 Amborella trichopoda 70 2e-85 312
WERAM-Prp-0082 EMJ27202 Prunus persica 71 3e-83 305
WERAM-Met-0013 KEH39913 Medicago truncatula 69 6e-82 300
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 74 8e-82 300
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 70 8e-81 297
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 66 6e-80 294
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 69 2e-79 292
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 64 2e-79 292
WERAM-Sei-0086 Si023009m Setaria italica 64 4e-79 291
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 64 3e-78 288
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 64 3e-78 288
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 66 4e-78 288
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 66 4e-78 288
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 66 4e-78 288
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 66 4e-78 288
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 66 4e-78 288
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 66 4e-78 288
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 66 4e-78 288
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 67 1e-77 286
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 66 1e-77 286
WERAM-Aet-0106 EMT19247 Aegilops tauschii 63 1e-76 283
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 64 1e-76 283
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 62 1e-76 283
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 64 3e-75 278
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 66 6e-73 271
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 67 4e-70 261
Created Date 25-Jun-2016