WERAM Information

Tag Content
WERAM ID WERAM-Viv-0016
Ensembl Protein ID VIT_04s0008g01670.t01
Gene Name VIT_04s0008g01670
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_04s0008g01670 VIT_04s0008g01670.t01 VIT_04s0008g01670.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-12 48.3 209 259
Organism Vitis vinifera
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                            t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  VIT_04s0008g01670.t01 209 TLCGACGENYASDEFWICCDVCEKWFHGKCVKITPARAEHIKQYKCPSCSN 259
                            78****99999999********************666664479******86 PP
Protein Sequence
(Fasta)		MDGGPPYNPR TVEEVFRDFK GRRAGMIKAL TTDVEEFYQQ CDPDKENLCL YGFPSEQWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDA WLLAVAFYFG ARFGFDKADR 120
KRLFNMINDL PTIFEVVTGT AKKQVKEKSS VSNHSSNKSK SNSKVGKDFY FPNPIRGSES 180
QGKYSKPLQA KDEDEEGLEE EEEEEHGETL CGACGENYAS DEFWICCDVC EKWFHGKCVK 240
ITPARAEHIK QYKCPSCSNK RARA 264
Nucleotide Sequence
(Fasta)		AGAGGTCAAA TATTTCCCCA ACTTTCCCTC CTCGCTTTCT CTCTCTACCA CCACACTCCA 60
TCACACTCTC TCTACAGTCT GCTCCGCAAG TCTCTACGCT TTGTGCTGAT AGCAGAGGAG 120
GCATGGACGG AGGTCCACCA TACAACCCTC GTACAGTCGA GGAGGTCTTT AGGGACTTCA 180
AGGGTCGAAG AGCTGGCATG ATAAAAGCCC TCACCACTGA TGTTGAAGAA TTTTATCAGC 240
AGTGCGATCC GGACAAGGAA AACCTATGCC TTTATGGATT TCCCAGTGAG CAGTGGGAAG 300
TCAATTTACC TGCCGAAGAG GTGCCTCCAG AGCTTCCTGA GCCTGCACTA GGTATTAATT 360
TTGCCAGAGA TGGGATGCAA GAAAAGGATT GGTTATCTTT GGTCGCTGTC CACAGTGATG 420
CATGGTTACT TGCTGTGGCC TTTTATTTTG GTGCTAGATT TGGATTTGAT AAAGCTGACA 480
GGAAACGCCT TTTTAACATG ATAAATGATC TTCCAACAAT ATTTGAGGTT GTAACGGGAA 540
CAGCCAAGAA ACAAGTTAAG GAAAAGTCAT CAGTCTCAAA TCACAGCAGC AACAAATCAA 600
AATCAAACTC TAAGGTAGGG AAGGACTTCT ATTTCCCTAA CCCCATTCGT GGCTCAGAAT 660
CTCAGGGTAA ATATTCAAAG CCATTGCAAG CAAAGGATGA AGATGAGGAA GGTTTAGAGG 720
AGGAAGAAGA AGAGGAACAT GGGGAGACAC TGTGTGGGGC ATGTGGAGAG AATTATGCAT 780
CTGATGAGTT CTGGATCTGC TGTGATGTCT GTGAGAAATG GTTCCATGGA AAGTGTGTCA 840
AGATCACTCC TGCAAGGGCT GAGCATATTA AGCAGTACAA ATGTCCATCA TGCAGCAACA 900
AGAGAGCACG AGCGTGATAG TTACTGGGTA GGTGGGCTCT TCCTCTGTAT TCTTGGATGG 960
TGGATTTTGC TAACTGTCTA GTAGGTTAGG TTTGTTCCTT GTCTCCTGCA ATGACAATGT 1020
GTCCTTTTAT TCTAGCAATT GTCATGGATA TTATGTGTAG GTAGCAAACA TGCAGTTCAC 1080
TTGATTCTAG ATCATACACT CAGGTGGGGA GTCATTTCCC CCTGCCATGG TGGAGAGACT 1140
TGTTTTATGT TTGCTTGATT TCACCTGTAT TTATAGGCTC TA 1183
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 89 3e-105 378
WERAM-Prp-0082 EMJ27202 Prunus persica 85 2e-99 359
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 86 2e-97 352
WERAM-Thc-0105 EOY30333 Theobroma cacao 87 1e-96 349
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 81 1e-94 343
WERAM-Amt-0088 ERM99796 Amborella trichopoda 82 3e-93 338
WERAM-Met-0172 KEH18446 Medicago truncatula 81 9e-92 333
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 76 8e-90 327
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 72 3e-88 322
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 75 8e-88 320
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 72 1e-86 317
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 74 1e-85 313
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 74 2e-85 312
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 70 5e-84 308
WERAM-Sei-0086 Si023009m Setaria italica 71 9e-83 303
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 70 9e-82 300
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 70 9e-82 300
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 70 9e-82 300
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 70 9e-82 300
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 70 9e-82 300
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 70 9e-82 300
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 70 9e-82 300
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 70 9e-82 300
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 67 2e-81 299
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 69 3e-81 298
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 68 1e-80 296
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 70 1e-80 296
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 68 1e-80 296
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 70 2e-80 295
WERAM-Aet-0106 EMT19247 Aegilops tauschii 70 5e-80 294
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 68 5e-79 291
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 68 3e-77 285
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 64 3e-74 275
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 72 3e-72 268
Created Date 25-Jun-2016