WERAM Information

Tag Content
WERAM ID WERAM-Sol-0130
Ensembl Protein ID Solyc10g085180.1.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc10g085180.1 Solyc10g085180.1.1 Solyc10g085180.1.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.50e-11 43 185 234
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslp.eg.kswyCpsCk 51 
                         t+C  C+ +++ +++++ Cd C++wfH+kCvk++  +++ eg k++ Cp C 
  Solyc10g085180.1.1 185 TLCGCCDGHYNADEFWIGCDICEKWFHGKCVKIT--PAKaEGiKQYKCPACN 234
                         78**99766777778*******************..444245689******6 PP
Protein Sequence
(Fasta)		MASISSTPRT VEEIFKDYSA RRAGILRALT YDVEEFSHMC DPEKENLCLY GHPNETWEVN 60
LPADEVPPEL PEPALGINFA RDGMNRIDWL SLVAVHSDCW LLSVAYFFGA RLNKNERKRL 120
HSLINDLPTV FEVIAERRPI KDKPSAENGS KSRGSIQRTS DVQSKSTAKL ADESCDEDEE 180
EHGETLCGCC DGHYNADEFW IGCDICEKWF HGKCVKITPA KAEGIKQYKC PACNLKRHRP 240
Nucleotide Sequence
(Fasta)		ATGGCTTCAA TTTCTTCTAC TCCAAGGACT GTAGAAGAGA TCTTCAAAGA TTATAGTGCT 60
CGTCGTGCTG GGATACTTCG TGCTTTAACT TATGATGTGG AAGAGTTTTC TCATATGTGT 120
GATCCAGAAA AGGAAAATTT GTGTCTGTAT GGACATCCGA ACGAAACATG GGAAGTCAAT 180
CTTCCAGCTG ACGAAGTTCC ACCTGAACTC CCAGAGCCAG CTCTTGGGAT AAATTTTGCA 240
AGGGATGGGA TGAATCGTAT AGATTGGCTT TCATTGGTTG CTGTGCATAG TGATTGTTGG 300
TTGCTTTCTG TGGCTTACTT TTTTGGAGCT CGTCTTAACA AAAATGAAAG GAAGCGTCTG 360
CACAGCTTGA TCAACGATTT GCCCACTGTG TTTGAAGTCA TAGCAGAAAG AAGGCCCATA 420
AAAGACAAGC CTAGTGCAGA GAATGGGAGC AAATCCCGTG GTAGTATACA GAGGACAAGT 480
GATGTTCAGT CTAAAAGCAC TGCAAAGCTG GCAGATGAAA GTTGCGACGA GGATGAAGAA 540
GAACATGGTG AAACACTTTG CGGATGCTGT GATGGGCATT ACAATGCTGA TGAATTTTGG 600
ATTGGTTGTG ATATCTGCGA GAAATGGTTC CATGGTAAGT GCGTGAAGAT AACACCTGCT 660
AAAGCTGAAG GTATAAAGCA GTATAAATGC CCTGCATGTA ACTTGAAGCG GCACCGACCA 720
TAG 724
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0033 PGSC0003DMT400028638 Solanum tuberosum 94 3e-126 447
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 79 2e-98 355
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 77 8e-98 353
WERAM-Prp-0083 EMJ07006 Prunus persica 78 2e-96 348
WERAM-Thc-0059 EOY07191 Theobroma cacao 77 3e-96 348
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 76 2e-95 345
WERAM-Met-0092 KEH28874 Medicago truncatula 75 3e-93 338
WERAM-Mua-0013 GSMUA_Achr10P23040_001 Musa acuminata 73 7e-91 330
WERAM-Amt-0010 ERN05231 Amborella trichopoda 72 2e-90 329
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 72 2e-88 322
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 72 2e-88 322
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 65 2e-87 319
WERAM-Sob-0001 Sb01g003420.1 Sorghum bicolor 65 6e-87 317
WERAM-Sei-0039 Si010912m Setaria italica 65 9e-87 317
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 66 2e-86 315
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 70 3e-86 315
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 69 3e-86 315
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 65 8e-86 313
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 65 9e-86 313
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 65 1e-85 313
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 61 2e-85 312
WERAM-Orbr-0082 OB07G15980.1 Oryza brachyantha 69 5e-83 304
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 72 5e-83 304
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 72 5e-83 304
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 72 5e-83 304
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 72 1e-82 303
WERAM-Orb-0051 OBART05G04390.1 Oryza barthii 59 3e-82 301
WERAM-Brd-0001 BRADI1G03900.1 Brachypodium distachyon 63 4e-82 301
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 63 6e-82 300
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 63 1e-81 299
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 71 5e-81 297
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 66 8e-79 290
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 67 1e-77 286
WERAM-Aet-0099 EMT23706 Aegilops tauschii 57 3e-76 281
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 67 3e-64 242
Created Date 25-Jun-2016