WERAM Information

Tag Content
WERAM ID WERAM-Brd-0001
Ensembl Protein ID BRADI1G03900.1
Gene Name BRADI1G03900.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI1G03900 BRADI1G03900.1 BRADI1G03900.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.80e-12 47.2 192 241
Organism Brachypodium distachyon
Domain Profile
  Me_Reader PHD
         PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                     t+C +Cg  ++++++++ Cd C +wfH+kCv ++  +++  k++ Cp C 
  BRADI1G03900.1 192 TFCGTCGGLYDESEFWIGCDICGRWFHGKCVRITPAKAEHIKQYKCPDCS 241
                     89****99999999********************555554479******7 PP
Protein Sequence
(Fasta)		METARGPAAA SRPRTVEEIF KDFSNRRLGL VRALTSDVEQ FYGLCDPDKE NLCLYGNPDG 60
SWSVTLPAEE VPSELPEPAL GINFARNGMH RRDWLSLVAV HSDSWVLAVA FFYGARLNAN 120
ERKRLFSMIN DLPNVYESMV DRKQSRAKSG VDGNGKSRHS SKQTKDGRAK NSRVLAQEHA 180
EEDDEEEEHS ETFCGTCGGL YDESEFWIGC DICGRWFHGK CVRITPAKAE HIKQYKCPDC 240
SGSKKIR 247
Nucleotide Sequence
(Fasta)		GCTCTTCGGA CTCGCCGCCG GGGATAGCGG CTTATCTTCC TTCCCCACAT GGAGACGGCG 60
CGGGGCCCCG CCGCGGCGTC CAGGCCGCGC ACCGTGGAGG AAATCTTCAA GGACTTCTCC 120
AACCGCCGCC TCGGCCTCGT CCGCGCCCTC ACCTCCGATG TGGAGCAGTT CTACGGCCTC 180
TGCGACCCAG ATAAGGAGAA TTTGTGCCTG TACGGGAACC CCGACGGGAG CTGGTCGGTC 240
ACCCTGCCGG CGGAGGAGGT GCCTTCGGAG CTGCCCGAGC CGGCCCTCGG CATCAACTTC 300
GCGCGCAACG GCATGCACCG CCGCGACTGG CTCTCCCTCG TCGCCGTGCA CTCCGACTCG 360
TGGGTCCTCG CCGTCGCCTT CTTCTACGGC GCACGGCTCA ACGCTAACGA ACGGAAGCGC 420
TTATTCAGCA TGATCAACGA TCTGCCAAAT GTGTATGAAA GTATGGTTGA CAGAAAGCAG 480
TCCAGGGCCA AGTCTGGTGT TGATGGCAAC GGCAAATCCA GACACTCATC AAAGCAAACA 540
AAGGACGGCC GTGCAAAGAA CTCCAGAGTA CTCGCTCAGG AGCATGCCGA GGAGGACGAC 600
GAGGAAGAAG AGCACAGTGA AACCTTCTGC GGGACCTGTG GCGGTCTGTA CGACGAGAGC 660
GAGTTCTGGA TCGGCTGCGA CATCTGCGGG CGGTGGTTCC ACGGCAAATG CGTGCGGATA 720
ACCCCTGCTA AAGCGGAGCA CATAAAGCAA TACAAGTGCC CTGACTGCAG CGGCTCCAAG 780
AAGATCAGGT AGTTAAGGCT CTATATATGT GGCCTGCCTC TGCTATAAGT GTCGTTAACC 840
CCAATCTGAT CAAAGCAAAC TACACCGGTT TCCTTCTCCG CCCAAGGCCG CATCTGGCAG 900
ATGTGGGCTT TGTTTCCCTA GAAAATGCAT GCTTTTCCAT GTGGTAGTAG CCTTATACGT 960
GCTCTGAAAG ACTGATGATA CATAGCTCAT AGGTACTACT CTTGTAGCTT GTTGTTATAG 1020
ATGGGCTCCT TGGTTGTCAT TTTTCGATGT GTTTATTCCC ATGCGTGGAC AATGCCGCTG 1080
TAGCCTTGTT TCGCCGATGA TGGTCGGATT GTGCCTTGGA AGTGATTTGG TTGTAGTATT 1140
GTTTTTTCTT CTTTCCTGCA GCAACATCTT GTTGGTTGTC CTTGTGTTAC AAATACTAAC 1200
AGAAGAAGCA TCAATGCGTA AC 1223
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 74 2e-100 362
WERAM-Sob-0001 Sb01g003420.1 Sorghum bicolor 71 1e-98 356
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 73 1e-93 339
WERAM-Org-0041 ORGLA03G0356800.1 Oryza glaberrima 73 1e-93 339
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 73 2e-93 339
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 74 5e-93 337
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 74 1e-92 336
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 74 1e-92 336
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 74 1e-92 336
WERAM-Ori-0031 BGIOSGA009559-PA Oryza indica 74 1e-92 336
WERAM-Orgl-0042 OGLUM03G38760.1 Oryza glumaepatula 75 1e-92 336
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 73 2e-92 335
WERAM-Sei-0134 Si037171m Setaria italica 71 1e-89 326
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 70 6e-89 323
WERAM-Orm-0044 OMERI03G35810.1 Oryza meridionalis 63 3e-87 318
WERAM-Sot-0033 PGSC0003DMT400028638 Solanum tuberosum 66 8e-84 307
WERAM-Mua-0013 GSMUA_Achr10P23040_001 Musa acuminata 67 4e-82 301
WERAM-Sol-0130 Solyc10g085180.1.1 Solanum lycopersicum 63 5e-82 301
WERAM-Prp-0083 EMJ07006 Prunus persica 69 3e-81 298
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 69 5e-81 297
WERAM-Aet-0107 EMT22745 Aegilops tauschii 75 6e-81 297
WERAM-Met-0092 KEH28874 Medicago truncatula 70 7e-81 297
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 68 2e-80 296
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 60 3e-80 295
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 77 3e-80 295
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 60 5e-80 294
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 68 1e-79 293
WERAM-Thc-0059 EOY07191 Theobroma cacao 67 1e-79 293
WERAM-Amt-0010 ERN05231 Amborella trichopoda 65 4e-79 291
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 55 1e-76 283
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 60 1e-73 273
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 62 1e-72 270
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 62 2e-72 269
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 61 1e-71 266
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 60 4e-71 265
Created Date 25-Jun-2016