WERAM Information

Tag Content
WERAM ID WERAM-Sei-0084
Ensembl Protein ID Si022496m
Gene Name SETIT_022496mg
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Si022496m.g Si022496m Si022496m
Si022496m.g Si022678m Si022678m
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.10e-12 46.8 300 346
Organism Setaria italica
Domain Profile
  Me_Reader PHD
    PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                +C +Cg+++++  ++++Cd C++wfH+kCvk++  +++  k++ CpsC+
  Si022496m 300 LCGACGQSYDD--FWICCDLCEKWFHGKCVKITPAKAEHIKQYKCPSCT 346
                7****887777..8*******************555554479******8 PP
Protein Sequence
(Fasta)		MCVFVESSMY AFMGRGADCL PACLGADASK FQSTLSSSSQ SPAPLLSSPK TLPFPSPAGS 60
RGPMDGGGGF MGPPPVPRSP EDVFRDYRAR RAGLIRALTT GKPTSPLPSP HLPPLRLRLG 120
LEFSLVSRWP SADVEKFYVM CDPEKENLCL YGLPNETWEV NLPAEEVPPE LPEPALGINF 180
ARDGMNEKDW LSLVAVHSDS WLLSVAYYFG ARFGFDKESR KRLFTMINNL PTVYEVVTGT 240
AKKEPKEKTP KNSNKSSKSG SKPSRQAEPN SRVPKMPPPK DEEESEGEEG EPQEDHETAL 300
CGACGQSYDD FWICCDLCEK WFHGKCVKIT PAKAEHIKQY KCPSCTGSKR AKA 353
Nucleotide Sequence
(Fasta)		ATGTGCGTTT TTGTTGAAAG TTCGATGTAT GCTTTCATGG GCCGCGGCGC CGACTGTCTT 60
CCTGCCTGCC TCGGCGCCGA CGCTTCCAAA TTCCAATCGA CTCTCTCGTC GTCCTCGCAA 120
TCCCCAGCTC CCCTCCTCTC CTCTCCCAAA ACCCTACCCT TCCCTTCCCC AGCAGGCTCC 180
CGGGGGCCAA TGGACGGAGG AGGCGGATTC ATGGGCCCGC CGCCGGTGCC CCGCTCGCCG 240
GAGGACGTCT TCCGGGACTA CCGCGCGCGC CGGGCCGGCC TGATCAGGGC GCTCACCACC 300
GGTAAACCCA CCTCGCCTTT GCCTTCGCCT CACCTACCCC CCCTCCGACT CCGTCTGGGG 360
CTCGAGTTCT CACTGGTTTC CCGCTGGCCC TCTGCAGATG TGGAGAAGTT CTACGTGATG 420
TGCGACCCAG AGAAGGAGAA CCTATGTTTA TATGGACTTC CCAATGAGAC ATGGGAAGTC 480
AACTTGCCTG CAGAGGAAGT TCCTCCTGAA CTCCCAGAGC CAGCTCTGGG AATTAATTTT 540
GCACGTGATG GGATGAATGA AAAGGATTGG CTGTCACTTG TTGCCGTGCA TAGTGATTCT 600
TGGTTATTGT CAGTTGCATA TTATTTTGGA GCAAGGTTTG GTTTCGACAA GGAATCCAGG 660
AAACGGCTCT TCACCATGAT CAATAACCTT CCCACCGTAT ATGAGGTTGT TACAGGAACT 720
GCCAAGAAAG AACCCAAAGA AAAAACTCCT AAAAACAGCA ATAAGAGTAG CAAATCTGGC 780
TCGAAGCCCT CACGCCAGGC AGAGCCCAAC TCAAGGGTCC CGAAGATGCC ACCCCCAAAG 840
GACGAGGAGG AGAGTGAAGG GGAGGAAGGC GAACCACAGG AAGACCATGA GACCGCGCTG 900
TGTGGTGCAT GCGGCCAAAG TTACGACGAC TTCTGGATCT GCTGCGACCT ATGTGAGAAA 960
TGGTTCCATG GCAAGTGCGT CAAGATCACC CCAGCCAAAG CGGAGCACAT CAAGCAGTAC 1020
AAGTGCCCCT CCTGCACAGG CAGCAAGAGG GCCAAGGCTT GATTCTAGGA GACCCGAAAG 1080
GCCGGCAATG CTCTAAGGAG CCTTGACGAG TTGTAAGCTT AAATTGTCAG GTTAGGGCAG 1140
TAACAGATTT GAATACCTTG TTTGGATATT GTCGGCGTTG ATGCTTGAGG ATCCCTCTAA 1200
ATTTAGTGTC AGTAGTTGCG ATTACTGACT GACTGCTGTA GTGTGTGTGG CCTCAAGCAT 1260
CTATGCTCTG TAGTCTACTG AATTGTGTGC TTTAGATTCC AACTGTGCCA TGTATGATCA 1320
TTTAGTCGTT TTAACTTTAG CTTCCTGTCA TTTCCTGGCT GGGTTCTTCA TCAGGTGCAC 1380
ACAACCACAC AGGAATCTTT GAGAAAAAAG GTGAGGTCTA AATGGTGTTT TGCCATGTAT 1440
GATTTTAGTG GTTTGATAAT GCTGGTGAAC GCAATGGTTG GTTGCTGTTT GTTGGGCCTG 1500
ATGCTTTGTA CTTGTTTTAT TGTAAGGAAT GCATGGTTGG ATGCACCGAC AAGGTAAAGT 1560
ACTGCACTTA CTTTTGATCG TGAAGAATAT ACGCTTGCTC CATATGTAAG AAGTCCAAGT 1620
TCATGTGTCC CGCATGAGCT CGCCGAGGGC GTGGTCCTCC GACACTCCTC CAACAGCAGG 1680
ATCAGAAGAA ACCCCCTGTT GCTTCTTCTC CTGCTGCTGC TGCGGCCCAT CCTTTTGGCA 1740
TGTGTTTCTG TGAAACGGAA GTCTTCTTCA ATGGCGCCAG GTGAGCAAGT CCTCCATGGA 1800
AGCCTGATAC AAGAACTGAG CTAGATCGTG GTAAAGAGCT AAGCTATAGC TGAAAGCCTG 1860
AAACCATTGG AGAAGCTTGC TTCAATGTAG TCTTTCACAT TGATTCGAAG CAAGTAAATA 1920
CACGACGCAC GGTGGCATTA ATCATGCCCG TGCCATCCGC GTGAACACGG AGATCCTGCT 1980
TGTCAGTCTG TTG 1994
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0115 Sb08g006530.1 Sorghum bicolor 83 4e-88 322
WERAM-Zem-0085 GRMZM2G153087_P01 Zea mays 79 1e-85 313
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 74 2e-78 290
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 74 2e-78 290
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 74 2e-78 290
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 74 2e-78 290
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 74 2e-78 290
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 74 2e-78 290
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 74 2e-78 290
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 74 2e-78 290
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 73 1e-77 287
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 74 4e-77 285
WERAM-Brd-0116 BRADI4G40230.1 Brachypodium distachyon 71 5e-76 281
WERAM-Mua-0103 GSMUA_Achr7P02940_001 Musa acuminata 64 8e-75 278
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 72 2e-74 276
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 82 9e-71 264
WERAM-Thc-0075 EOY26404 Theobroma cacao 62 2e-69 260
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 61 3e-69 259
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 61 5e-69 258
WERAM-Met-0172 KEH18446 Medicago truncatula 58 7e-69 258
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 61 9e-69 257
WERAM-Sol-0018 Solyc01g102760.2.1 Solanum lycopersicum 61 1e-68 257
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 61 2e-68 256
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 58 5e-68 255
WERAM-Prp-0081 EMJ24886 Prunus persica 62 1e-67 253
WERAM-Amt-0088 ERM99796 Amborella trichopoda 61 2e-67 253
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 57 2e-67 253
WERAM-Glm-0204 GLYMA16G00680.1 Glycine max 60 8e-67 251
WERAM-Bro-0146 Bo8g066080.1 Brassica oleracea 58 2e-66 249
WERAM-Aet-0093 EMT29143 Aegilops tauschii 62 3e-66 249
WERAM-Hov-0089 MLOC_68143.1 Hordeum vulgare 62 7e-66 248
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 62 8e-66 248
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 54 6e-58 221
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 53 1e-56 217
Created Date 25-Jun-2016