WERAM Information

Tag Content
WERAM ID WERAM-Sob-0115
Ensembl Protein ID Sb08g006530.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb08g006530 Sb08g006530.1 Sb08g006530.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.20e-11 44.6 206 252
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    +C +Cg  +++  ++++Cd C++wfH+kCvk++  +++  k++ CpsC+
  Sb08g006530.1 206 LCGACGLGYDD--FWICCDLCETWFHGKCVKITPAKAEHIKQYKCPSCT 252
                    7****766666..7*******************555554479******8 PP
Protein Sequence
(Fasta)		MDGGAAFPGT PPVPRSPEDV FRDYRARQAG LIRALTTDVE KFYVMCDPEK ENLCLYGLPN 60
ETWEVNLPAE EVPPELPEPA LGINFARDGM NEKDWLSLVA VHSDSWLMSV AFYFGARFGF 120
DKEARKRLFT MINNLPSIYE VVTGTAKKEP KEKTHKSNNK TNKSGSKPSR QAEPNNSRVP 180
KMPPPKDEEE SEGEEGEPQE DHETALCGAC GLGYDDFWIC CDLCETWFHG KCVKITPAKA 240
EHIKQYKCPS CTGSKRAKA 259
Nucleotide Sequence
(Fasta)		CTTTTTTCTT TCTCCGAGAC GAGACGAGAC CGAGAGAAGT CTTCTCTATC TCAGCGCCGA 60
CGCTTCCCAA TTTCCTTCCA ATCGACTCCG CTCGCCGTCC CCAGCTCTCC CCTGCGCCTC 120
CCTCCCAAAA CCCTACGCCC CGCGCCCTGA CCAAGCTCCG GCGGGGACGA ATGGACGGAG 180
GAGCCGCCTT CCCGGGCACG CCGCCGGTGC CGCGCTCGCC GGAGGACGTC TTCCGGGACT 240
ACCGCGCGCG CCAGGCCGGC CTGATCAGGG CGCTCACCAC CGATGTGGAG AAGTTCTACG 300
TCATGTGCGA CCCAGAGAAG GAGAACCTAT GTTTATATGG ACTTCCCAAT GAGACTTGGG 360
AAGTGAACTT GCCTGCTGAG GAGGTCCCTC CTGAACTCCC AGAGCCAGCT CTGGGAATTA 420
ATTTTGCTCG TGATGGAATG AATGAAAAAG ATTGGCTATC ACTTGTTGCA GTGCATAGTG 480
ATTCTTGGCT AATGTCTGTT GCATTTTATT TTGGAGCAAG GTTTGGATTT GACAAGGAAG 540
CCAGGAAACG TCTCTTCACC ATGATCAATA ACCTTCCCAG CATATATGAG GTTGTCACAG 600
GAACTGCTAA GAAAGAGCCC AAAGAAAAAA CTCATAAAAG CAACAATAAG ACTAACAAAT 660
CTGGCTCAAA GCCCTCGCGC CAGGCGGAAC CCAACAACTC AAGGGTCCCA AAGATGCCAC 720
CTCCAAAGGA CGAGGAGGAG AGTGAAGGGG AGGAAGGGGA ACCACAGGAA GACCATGAGA 780
CTGCGCTGTG CGGCGCATGT GGCCTAGGTT ATGACGACTT CTGGATCTGC TGTGACTTAT 840
GTGAGACATG GTTCCACGGC AAGTGTGTCA AGATCACCCC GGCTAAAGCG GAGCACATCA 900
AGCAGTATAA GTGCCCTTCC TGCACAGGAA GCAAGAGGGC CAAGGCTTGA TTATATCTAT 960
GGTAGATCTG GATTGCCGAC GATGCTCCAA GAACTAAGGA GCCTTTGACG AGAGTTGTAA 1020
GCTGAATCTT TCGGGTAGGG CAGCTAATAG ATTTGAGTAC TTTGTTTGGA TACTTTGGTG 1080
CTTGAGATGC CTCTAAATCT AGTGTCAGTA ATTACGAGTA CTGACCAACT GTAAACTGTT 1140
GTAGTTTGTG TGGCCCTCAA GCATCTATGT TCTGTAGTCT ACTGAGTTGT GTGGTTTAGA 1200
TTCCAACTTG CCATTTGTGA TGAAGCAGTC GTTTTAAAGT TAGATCCCAA TCATTTCCTG 1260
ACTACATTCG TCGTCATGTA ATCGTTTTTA CGCAGAATCT AGCAGTAAAG GTCCGGTTCC 1320
1321
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0085 GRMZM2G153087_P01 Zea mays 93 1e-103 373
WERAM-Sei-0084 Si022496m Setaria italica 83 4e-89 325
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 79 1e-87 319
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 79 1e-87 319
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 79 1e-87 319
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 79 1e-87 319
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 79 1e-87 319
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 79 1e-87 319
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 79 1e-87 319
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 79 1e-87 319
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 79 1e-86 317
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 80 5e-86 314
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 78 4e-85 311
WERAM-Brd-0098 BRADI4G21040.1 Brachypodium distachyon 76 7e-83 303
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 71 2e-81 299
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 81 2e-77 286
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 67 8e-77 283
WERAM-Prp-0081 EMJ24886 Prunus persica 69 2e-76 282
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 68 3e-76 281
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 68 5e-76 281
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 67 7e-76 280
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 67 8e-76 280
WERAM-Thc-0075 EOY26404 Theobroma cacao 69 1e-75 280
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 69 2e-75 279
WERAM-Met-0172 KEH18446 Medicago truncatula 68 2e-75 279
WERAM-Amt-0088 ERM99796 Amborella trichopoda 66 2e-75 279
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 63 4e-75 278
WERAM-Glm-0084 GLYMA07G40165.1 Glycine max 65 9e-75 277
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 2e-74 275
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 65 5e-74 274
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 65 3e-73 271
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 68 1e-72 270
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 60 4e-64 241
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 56 3e-62 235
Created Date 25-Jun-2016