WERAM Information

Tag Content
WERAM ID WERAM-Sob-0124
Ensembl Protein ID Sb09g020610.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb09g020610 Sb09g020610.1 Sb09g020610.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.20e-12 45.8 202 252
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C  Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C +
  Sb09g020610.1 202 TLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDCSN 252
                    78****988888999*******************666664479******86 PP
Protein Sequence
(Fasta)		MDPGAGAHYS ARTAEEVFRD FRGRRAGMIK ALTNDVEKFY QLCDPEKENL CLYGYPNETW 60
EVTLPAEEVP PEIPEPALGI NFARDGMNEK DWLALVAVHS DSWLLAVAFY FAARFGFDKE 120
ARRRLFNMIN NLPTIFEVVT GVAKKQNKEK GPNSTSKSNK PSSKMTSRPE SHSKATKVAA 180
PPKDDDDESG EEYEEEEERD NTLCGSCGTN DGKDEFWICC DSCERWYHGK CVKITPARAE 240
HIKHYKCPDC SNKRARA 257
Nucleotide Sequence
(Fasta)		TAAAACCGCA CCCCTCCTCC TGTCTCCTCC AACCCTCTTG CCTGCGCCCC CTCCTCCCTT 60
CGTCTCCGCC GCCGCCGCCG CCTCCTCCTC GCCGGAACCC TAAATGGACC CCGGCGCCGG 120
CGCGCACTAC TCCGCCCGTA CCGCGGAGGA GGTCTTCCGC GACTTCCGCG GCCGCCGCGC 180
GGGCATGATC AAGGCCCTCA CCAACGATGT GGAGAAGTTC TACCAGCTGT GCGACCCCGA 240
AAAGGAAAAC TTGTGCCTTT ATGGCTACCC CAACGAAACA TGGGAAGTAA CTTTGCCAGC 300
AGAGGAAGTT CCTCCGGAGA TCCCTGAACC AGCTTTGGGT ATAAACTTTG CTAGGGATGG 360
CATGAATGAG AAGGATTGGT TGGCGCTAGT TGCTGTTCAT AGCGATTCCT GGTTACTAGC 420
TGTTGCATTC TACTTTGCGG CCCGGTTTGG GTTTGACAAA GAGGCCAGGC GGCGACTCTT 480
CAACATGATA AATAACTTGC CCACGATATT TGAAGTAGTG ACTGGGGTTG CCAAGAAACA 540
AAACAAGGAG AAGGGCCCCA ATAGTACCAG CAAAAGCAAC AAACCAAGTT CGAAAATGAC 600
ATCAAGACCC GAGTCTCATT CGAAGGCGAC AAAAGTGGCA GCGCCCCCCA AGGATGACGA 660
TGATGAGAGC GGTGAAGAAT ATGAAGAAGA GGAAGAGCGT GATAACACCT TATGTGGATC 720
CTGTGGGACA AATGATGGCA AGGATGAATT CTGGATCTGT TGTGATAGTT GTGAGCGGTG 780
GTACCATGGG AAGTGTGTTA AGATCACACC TGCGCGTGCC GAGCACATCA AGCACTACAA 840
ATGCCCAGAT TGCAGCAACA AGAGGGCAAG AGCCTAGCGT CAAGCCCTTT TGTGACCCTG 900
GAGTGAAGTA AGCGCCAAAT CATTGATGTC TGCAGATATA TGCCTAGGCC TAGCTGTCTA 960
GCTTGTAGAC TTGCTTTTCA TTTCAAATGA ACGCTGTTGA TTGACTCGGT TGCCCGCAGC 1020
AGCTCATGTT GCTTGGGCTT AATTGTGTTT AATGTTTTAT AAGCGGTGGT TGTTGTAGGA 1080
CCAGGCAGTC TTGCAGACGT GTGATAGACG TTTTTGGACT TAACTGACCG TTTCTACATT 1140
GCT 1144
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0086 Si023009m Setaria italica 98 4e-117 417
WERAM-Zem-0090 GRMZM2G158918_P01 Zea mays 95 1e-116 416
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 89 5e-111 397
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 90 5e-106 380
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 90 5e-106 380
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 90 5e-106 380
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 90 5e-106 380
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 90 5e-106 380
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 90 5e-106 380
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 90 5e-106 380
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 83 7e-106 380
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 90 1e-105 379
WERAM-Aet-0106 EMT19247 Aegilops tauschii 86 3e-105 378
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 89 4e-105 377
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 82 2e-104 375
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 77 2e-97 352
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 82 3e-96 348
WERAM-Orbr-0061 OB05G24700.1 Oryza brachyantha 89 5e-94 341
WERAM-Amt-0088 ERM99796 Amborella trichopoda 73 6e-91 330
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 84 2e-90 328
WERAM-Thc-0077 EOY27191 Theobroma cacao 73 3e-89 325
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 71 4e-88 321
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 72 5e-88 321
WERAM-Prp-0082 EMJ27202 Prunus persica 71 1e-85 313
WERAM-Glm-0102 GLYMA09G07970.1 Glycine max 69 1e-85 313
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 68 6e-85 310
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 68 4e-84 308
WERAM-Met-0172 KEH18446 Medicago truncatula 69 7e-84 307
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 69 8e-83 303
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 67 2e-82 302
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 66 2e-81 299
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 66 6e-81 297
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 64 2e-74 276
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 63 3e-71 265
Created Date 25-Jun-2016