WERAM Information

Tag Content
WERAM ID WERAM-Php-0114
Ensembl Protein ID PP1S53_239V6.1
Gene Name PHYPADRAFT_125061
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S53_239V6 PP1S53_239V6.1 PP1S53_239V6.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.70e-12 47.1 206 256
Organism Physcomitrella patens
Domain Profile
  Me_Reader PHD
         PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                     t+C +Cg +++ +++++ Cd C++w+H+kCvk++  +++  k++ Cp C +
  PP1S53_239V6.1 206 TFCGTCGGSYTADEFWIGCDICEKWYHGKCVKITPARAEHIKQYKCPACSN 256
                     89*****9999999********************666664479******86 PP
Protein Sequence
(Fasta)		MEGASVSTNP RSVDEVFKDF RGRRAGMLKA LTSEVEEFYR QCDPEKENLC LYGYPEETWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQRKD WLSLVAVHSD AWLLAVAFYY GARFDKNERK 120
RLFNSINELP TVFDVVTGKK PVKEKASVVV NHNNNNNNNN NSGRNKTKSA AKVQRTAEPV 180
KAKPAPPPPK EDDDLEDEDE EEHGDTFCGT CGGSYTADEF WIGCDICEKW YHGKCVKITP 240
ARAEHIKQYK CPACSNKRAP SFP 263
Nucleotide Sequence
(Fasta)		ACTTACTTAC ACTCGCACCC CCTCCCCTCC CTTCCCCCCA CGCAAACCCT TGACAGGGGA 60
AGTGCGAAGC GAAGCTGGGC TCTCACTTGC TTGGGCTTTC CCCCTCTCCT CTCCTCCCTT 120
CGGTCTGGTT GTTCGTTGCT GAGTGCTGCT GCTCTGCACG CACCGAGCGC GCTGCGAATT 180
GGATGTGACC TTAGCGTTTG CGTCGTCGTC GTCGTTGTGG CATCCAATTT ACCTCTTGCC 240
CGCCGGAGCG TGTGAGCACA ATATTTTGCT TCGGTCGTGT TGTGCGATCA AGCATGTTTT 300
TACTCCTTGG TCTGGGGGTT GGAGAATGCG GAGCGAGTGG TGTCGGAGTG TAATTTGGGA 360
ATTTGTTGTT AGAGGATATG TTGTGTTGTT TCGAAGAGTC GACGATTGGC GGAGTTGAGT 420
TTTCTTAGGT TTGAAGGCGG ACCTTCAAGG GGTAGACAGC TGAGTTTCGA GGGAGTTGTG 480
AGAGAGTTTC GAGTTTCCCT GTTTTTTTTG TTTTTGTATG TTTTTGTTCG TTTTTGTTTT 540
TGCAGAGCGG GTTGGTTGAG GCGTGGTGGC GAGATGGAAG GGGCGTCCGT GTCAACTAAC 600
CCTCGGTCCG TGGACGAGGT CTTTAAGGAT TTCAGAGGGC GTCGAGCTGG GATGCTCAAG 660
GCTCTTACTT CTGAGGTAGA GGAATTTTAT CGCCAATGCG ATCCAGAAAA GGAGAATTTG 720
TGTTTGTATG GATATCCGGA GGAGACGTGG GAAGTGAACC TTCCAGCCGA AGAGGTACCG 780
CCCGAGCTAC CCGAGCCTGC GCTGGGAATC AACTTCGCAC GAGACGGAAT GCAACGCAAG 840
GACTGGCTTT CATTGGTTGC TGTTCACAGT GACGCATGGC TGCTTGCCGT TGCGTTTTAT 900
TACGGTGCTC GATTTGACAA GAATGAAAGA AAGCGGCTAT TTAATTCTAT CAATGAGCTG 960
CCTACAGTAT TTGATGTAGT GACCGGTAAG AAACCTGTGA AGGAAAAAGC CAGCGTTGTC 1020
GTCAACCACA ACAACAACAA TAACAACAAT AATAACAGTG GCCGAAATAA GACAAAGTCG 1080
GCGGCTAAGG TGCAACGTAC TGCCGAACCT GTTAAGGCAA AGCCGGCACC ACCTCCTCCG 1140
AAGGAAGATG ACGATCTTGA GGATGAGGAC GAGGAGGAGC ACGGAGACAC ATTTTGTGGT 1200
ACCTGTGGTG GAAGTTATAC AGCTGATGAA TTTTGGATAG GGTGTGACAT CTGTGAAAAA 1260
TGGTATCACG GTAAATGTGT GAAGATCACA CCTGCAAGAG CGGAGCACAT CAAGCAATAC 1320
AAGTGCCCAG CGTGCAGCAA CAAAAGGGCG CCTTCATTCC CGTGACAGCT GCTATGGTGG 1380
CGGTCGTCAA TGGCTGCATC CGTGCCTTCA CCCTAGCTGC TTTGTGGTTT CACTGAGCTC 1440
CAGTTTGCCC GAGGTGGTGT AGTCGAGAAA CCTGAGTATT CGAGAAAGAA ATGGTTGCAA 1500
GCAGGAGTTC ATGCTTACAG AGTTTTGTAC AGTTCAGGAA GCTCTTAGGC AGCTTCATAG 1560
TTCCTCTTCA CATATTTATT CGTATTCATG TGTGAAGTGT AGGAATGTTC ACTAATTCTA 1620
GGAATACATG ATTTAAGATG GATGGCAAGC TTTGTTGCAC ATCTGTTC 1669
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 69 9e-87 317
WERAM-Amt-0088 ERM99796 Amborella trichopoda 68 7e-82 300
WERAM-Prp-0082 EMJ27202 Prunus persica 68 1e-81 299
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 64 4e-81 298
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 64 1e-80 296
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 68 2e-80 295
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 69 2e-79 293
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 66 3e-79 291
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 62 3e-78 288
WERAM-Thc-0077 EOY27191 Theobroma cacao 68 3e-78 288
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 66 4e-78 288
WERAM-Brr-0166 Bra034169.1-P Brassica rapa 62 7e-78 287
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 63 3e-77 285
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 65 2e-76 282
WERAM-Met-0172 KEH18446 Medicago truncatula 64 1e-75 280
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 61 8e-74 274
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 61 1e-73 273
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 61 3e-73 272
WERAM-Sei-0039 Si010912m Setaria italica 61 4e-73 271
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 61 5e-73 271
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 62 1e-72 270
WERAM-Orgl-0050 OGLUM05G04310.1 Oryza glumaepatula 56 2e-72 269
WERAM-Orb-0051 OBART05G04390.1 Oryza barthii 56 2e-72 269
WERAM-Sob-0119 Sb09g004740.1 Sorghum bicolor 59 2e-72 269
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 60 2e-72 269
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 61 4e-72 268
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 61 6e-72 267
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 58 9e-72 267
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 62 1e-71 266
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 62 1e-71 266
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 62 1e-71 266
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 62 1e-71 266
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 4e-71 265
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 56 2e-68 256
Created Date 25-Jun-2016