WERAM Information

Tag Content
WERAM ID WERAM-Php-0037
Ensembl Protein ID PP1S183_93V6.3
Gene Name HDT1502 PHYPADRAFT_168633
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S183_93V6 PP1S183_93V6.3 PP1S183_93V6.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 8.00e-22 101
HDAC HD2 3.00e-16 83
Organism Physcomitrella patens
Domain Profile
  HDAC HD2
Query: 1  MDFWGVEVPAGKPISCSPGEGMYLHVSQVALGESKVKGGKGNDRVVLKVQVDDSEVVLGT 60
          M+FWG+EV +GKP++ +P EG+ +HVSQ +LGE K K G   + V L V+V +  +VLGT
Sbjct: 1  MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKG---EFVPLHVKVGNQNLVLGT 57
Query: 61 LSEGKCDQMQLDLVFDREFKVSHNXXXXXVYICGYRT 97
          LS     Q+  DLVFD+EF++SH      VY  GY+T
Sbjct: 58 LSTENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKT 94
  HDAC HD2
Query: 1  MDFWGVEVPAGKPISCSPGEGMYLHVSQVALGESKVKGGKGNDRVVLKVQVDDSEVVLGT 60
          M+FWGVEV  GKP+   PG    +H+SQVALGESK       + + L V V   ++++GT
Sbjct: 1  MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESK---NNVTEPIQLYVTVGSDKLLIGT 57
Query: 61 LSEGKCDQMQLDLVFDREFKVSHNXXXXXVYICGYR 96
          LS  K  Q+  ++V +R F +SH      V+  GY+
Sbjct: 58 LSHEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYK 93
Query: 311 KKAGPHQCTGCDRTFTTESAMSQHIAAKH 339
           K AG   C  C RTFT+E  +  H  AKH
Sbjct: 262 KSAGAFGCKSCTRTFTSEMGLQSHTKAKH 290
Protein Sequence
(Fasta)		MDFWGVEVPA GKPISCSPGE GMYLHVSQVA LGESKVKGGK GNDRVVLKVQ VDDSEVVLGT 60
LSEGKCDQMQ LDLVFDREFK VSHNSSSSSV YICGYRTEGP EEHGSEDEDE DEDEEDGALA 120
VATIPVESNG SKIIKEVTDK AATDVAKVVE KAMQDKSLKK QVVPDGDSDE EDDEEDSDDD 180
MDEDEDDEGD EDEDDSDDSD ESEEEELAIE TAKAGKKRAA AEVATKDVEK KSKMDVTPKS 240
AGKQAAAEYW QSLIVAGSQA PGSRGKKGDK GGQVTPVTKE APKTPTDKGV KLAKALKGTP 300
TAPPPTPVSE KKAGPHQCTG CDRTFTTESA MSQHIAAKHK S 341
Nucleotide Sequence
(Fasta)		AGGGCGGACA AATGCTGGAG TTCTCGCCGA TGCTTTTGTT TGCTGACGAG TGCTCTATTC 60
GCTGGAGGTA TCCCTCAATT GCCTGGTTCA GTGTGTGCCG AGGCATCTGT TTACGACTGT 120
CTGATCTTTC GTAATGGATT TTTGGGGTGT CGAAGTGCCG GCTGGCAAGC CTATTTCATG 180
TTCTCCTGGC GAAGGGATGT ACCTTCATGT TTCCCAGGTT GCTCTTGGAG AGAGCAAGGT 240
CAAAGGGGGC AAGGGGAATG ACAGGGTTGT TCTGAAGGTT CAAGTTGATG ACAGCGAGGT 300
TGTGCTGGGG ACTCTTTCGG AAGGCAAATG TGATCAAATG CAACTGGATC TTGTTTTTGA 360
CAGAGAGTTC AAAGTTTCTC ATAACAGCAG CTCTTCAAGT GTCTACATTT GTGGATACCG 420
GACGGAAGGC CCCGAAGAAC ATGGTTCTGA AGACGAGGAC GAGGACGAGG ACGAGGAAGA 480
CGGTGCTCTC GCGGTTGCAA CGATACCAGT CGAATCGAAT GGGTCAAAGA TAATCAAGGA 540
GGTGACTGAT AAGGCTGCTA CTGACGTTGC AAAGGTCGTT GAGAAAGCCA TGCAGGATAA 600
ATCTCTCAAA AAGCAAGTTG TCCCGGATGG CGACTCTGAT GAGGAAGATG ACGAAGAAGA 660
TTCGGACGAT GACATGGATG AGGATGAGGA CGATGAGGGT GACGAGGATG AGGATGATTC 720
AGATGATTCG GATGAATCTG AGGAAGAAGA GTTGGCGATT GAAACCGCAA AGGCTGGGAA 780
GAAGAGAGCT GCGGCAGAGG TGGCTACGAA GGATGTCGAG AAGAAATCCA AGATGGACGT 840
CACTCCCAAG TCAGCAGGAA AGCAAGCCGC TGCAGAATAC TGGCAGAGCC TGATCGTTGC 900
AGGCAGCCAA GCACCTGGAT CTAGGGGAAA GAAAGGAGAT AAGGGCGGGC AGGTGACACC 960
CGTGACTAAA GAGGCTCCTA AAACTCCGAC AGACAAGGGA GTAAAGCTGG CTAAGGCACT 1020
GAAGGGCACT CCTACTGCTC CTCCGCCAAC ACCAGTATCC GAAAAGAAGG CTGGACCTCA 1080
CCAGTGCACG GGTTGTGACA GGACGTTCAC AACGGAATCT GCTATGAGCC AACACATTGC 1140
AGCAAAGCAC AAAAGTTGAG CATATGGGTA CTGGAATTTT GCTATTGTTC GAGTGATGAT 1200
GCTCGAGTTT GTGACCACAC TGTTCAGTAG ATAGTGTTGG TTCAATATTC TCGAAACGCA 1260
AGTTTATTAG AATCTTAGTA GTTTAGCATT TTACTTGATA TGAATAGAGA GTGGCTGTTT 1320
GGGGAATTAC ACTAGTCAAT GTATACTTTC GATGTCAATG TAGACTGCGG TGGTTGCTGC 1380
TAGGGTAACC TGCTCAGAAG TTTTGATATG ATATGGCAGA TGCCGTAGAG TTAGGGTTAG 1440
TACCATGTAG CGATTCGTCA GTAGTATGTA GTGCGTAGGG GACGATCGCT CCTCAGCACT 1500
GTTGTGTCCC TAAAGCTCCT CTTTTCGAAC ACTCGTGTTG TTGGTTACAG CTCAAGTATC 1560
TCTGGGTTCC AAGTTGGTTG TCGCCAGCTT TGTGAAGGCA TTTGGTAATC CAACTGGTTG 1620
ATTCTGGATA TTTCAAC 1638
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 48 1e-24 110
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 52 3e-24 110
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 50 1e-23 107
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 50 1e-23 107
WERAM-Prp-0078 EMJ06874 Prunus persica 53 2e-23 107
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 52 2e-23 107
WERAM-Thc-0115 EOY33573 Theobroma cacao 52 5e-23 105
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 49 5e-23 105
WERAM-Sei-0085 Si022778m Setaria italica 50 5e-23 105
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 49 6e-23 105
WERAM-Pot-0048 POPTR_0004s20020.1 Populus trichocarpa 50 6e-23 105
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 49 2e-22 103
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 49 3e-22 103
WERAM-Art-0083 AT3G44750.1 Arabidopsis thaliana 49 1e-21 101
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 52 5e-21 99.4
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 52 6e-21 99.0
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 48 7e-21 99.0
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 51 1e-20 97.8
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 49 8e-20 95.1
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 45 2e-19 94.0
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 44 1e-18 91.7
WERAM-Aet-0097 EMT09079 Aegilops tauschii 44 1e-18 91.3
WERAM-Met-0051 KEH38943 Medicago truncatula 46 1e-18 91.3
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 45 5e-18 89.4
WERAM-Bro-0186 Bo9g181760.1 Brassica oleracea 44 8e-18 88.6
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 42 4e-17 86.3
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 42 7e-16 82.0
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 39 9e-15 78.6
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 40 1e-14 78.2
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 41 6e-14 75.5
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 41 7e-14 75.5
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 43 8e-14 75.1
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 36 6e-10 62.4
WERAM-Amt-0052 ERN12770 Amborella trichopoda 48 1e-07 54.7
WERAM-Orm-0014 OMERI01G38240.2 Oryza meridionalis 42 2e-07 54.3
Created Date 25-Jun-2016