WERAM Information

Tag Content
WERAM ID WERAM-Zem-0062
Ensembl Protein ID GRMZM2G100146_P01
Gene Name hdt102 ZEAMMB73_070282
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G100146 GRMZM2G100146_T01 GRMZM2G100146_P01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 2.00e-22 102
Organism Zea mays
Domain Profile
  HDAC HD2
Query: 1  MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK--SDSALMYVKVDDKKLAIGTLSI 58
          MEFWG+EVK G  +  +PG   ++H+SQ ALGESK   ++   +YV V   KL IGTLS 
Sbjct: 1  MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60
Query: 59 DKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVE 93
          +K+PQ+  ++V  + F LSHT K  SVFFSGYKV+
Sbjct: 61 EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKVD 95
Query: 215 RGAE-NALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAKGKTPANNDKST------ 267
           R AE N+ K P S+KKAK  TP  QKT  KK   HVATPHP+K     +   ST      
Sbjct: 200 RSAEPNSSKNPASNKKAKFVTP--QKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQ 257
Query: 268 EKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGA 302
           +++PKS G+  CKSC++TF SEM LQ+H+KAKH A
Sbjct: 258 QQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHSA 292
Protein Sequence
(Fasta)		MEFWGLEVKP GSTVKCEPGH GFILHVSQAA LGESKKSDSA LMYVKVDDKK LAIGTLSIDK 60
YPQIQFDLVF NKEFELSHTS KTTSVFFSGY KVEQPIEGDE MDLDSEDEEE ELNIPVIKEN 120
GKADGKEEQK NQEKAVAATA SKSSLGLEKK SKDDSDDSDE DESDDSDEDD SDDSDEGEGL 180
SPDEGDDDSS DEDDTSDDDE EETPTPKKPE AGKKRGAENA LKTPLSDKKA KVATPPAQKT 240
GGKKGATHVA TPHPAKGKTP ANNDKSTEKS PKSGGSVPCK SCSKTFNSEM ALQAHSKAKH 300
GAK 303
Nucleotide Sequence
(Fasta)		CCGACTCGAC CCTTCTCCTC TCCGTCGCAT TTCCCGTCCG GTCTTTCCGT TACCCGGCGG 60
CTTTAAACCC TAGTTCCCAT TCCATCTTCG TTTCCGCTCC GCCGCCGTCG ATGGAGTTCT 120
GGGGTCTCGA GGTCAAACCT GGATCCACTG TCAAGTGTGA GCCTGGACAT GGCTTTATCC 180
TGCACGTTTC CCAGGCTGCC CTTGGGGAAT CAAAGAAAAG TGACAGTGCC TTAATGTATG 240
TCAAAGTTGA TGACAAGAAG CTTGCCATTG GAACGCTCTC TATCGACAAA TACCCACAGA 300
TACAATTCGA TTTGGTTTTC AATAAAGAGT TTGAGCTGTC ACACACATCG AAAACTACCA 360
GTGTATTTTT CTCTGGTTAC AAGGTTGAGC AGCCAATTGA GGGAGATGAA ATGGATCTTG 420
ATTCTGAGGA TGAAGAGGAG GAGCTAAACA TTCCAGTAAT CAAGGAAAAT GGCAAAGCTG 480
ATGGGAAGGA GGAGCAGAAA AATCAAGAGA AGGCAGTAGC TGCTACAGCT TCAAAATCAA 540
GTCTTGGCCT TGAAAAGAAA AGCAAGGATG ACTCTGATGA TTCTGATGAG GATGAGTCTG 600
ATGATTCTGA TGAGGATGAT TCTGATGATT CTGATGAAGG CGAGGGATTA TCTCCTGACG 660
AAGGCGATGA TGATTCAAGT GATGAGGATG ATACCAGTGA TGATGACGAG GAAGAAACCC 720
CAACTCCTAA AAAGCCAGAG GCAGGCAAGA AGAGAGGTGC TGAAAATGCT CTGAAAACGC 780
CTCTTTCTGA TAAGAAAGCA AAGGTTGCCA CACCGCCAGC CCAGAAAACA GGTGGCAAGA 840
AGGGTGCCAC CCATGTGGCA ACTCCACACC CAGCAAAAGG CAAGACCCCT GCAAACAATG 900
ACAAATCAAC GGAGAAGTCT CCAAAATCTG GTGGGTCAGT CCCTTGCAAA TCATGCAGCA 960
AGACATTCAA TAGTGAGATG GCTCTGCAGG CTCACTCCAA GGCGAAGCAT GGGGCCAAAT 1020
GAGTTGCAGG TCCAACTGAG TCCATGAAGG AGAAGCATGG TGGCCAAGTG AGTCGAAGGT 1080
CCATTCGAGT CCATGAAGGT GAAGCATGGG AGATCCAAGC GAGTCTGGAA AGATTGTCGA 1140
TGTTAGTAGG CTGTCCTTAT TTTGTTTAGA GACTTGTGGC TATGTGATTG ATGTAGCGAA 1200
ACAAGGCTGT GATGTGTTAA CTCTGCCTTA TAATATTTTG GTTGAACGTG CTCGATTGTT 1260
GTGCTTTGAA TTGGTGCTTT TTTTTTGCTA TATGGTGAGG TCTCGTATGG ATTCTTATGC 1320
GGTAGTGGCA CTGTAGTTTG TCGCACTGGT TTTGTTTGAA CCTGTG 1367
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 83 4e-60 228
WERAM-Sei-0085 Si022778m Setaria italica 79 3e-51 199
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 72 5e-43 172
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 72 5e-43 172
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 68 1e-41 167
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 77 1e-36 150
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 60 2e-35 147
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 60 2e-35 147
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 58 2e-35 147
WERAM-Aet-0097 EMT09079 Aegilops tauschii 60 6e-35 145
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 72 1e-34 144
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 70 8e-34 141
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 75 3e-33 139
WERAM-Mua-0063 GSMUA_Achr3P22840_001 Musa acuminata 54 1e-28 124
WERAM-Sol-0107 Solyc09g009030.2.1 Solanum lycopersicum 57 4e-27 119
WERAM-Pot-0048 POPTR_0004s20020.1 Populus trichocarpa 57 6e-27 118
WERAM-Sot-0008 PGSC0003DMT400006927 Solanum tuberosum 55 2e-26 117
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 55 2e-26 116
WERAM-Thc-0115 EOY33573 Theobroma cacao 54 7e-26 115
WERAM-Prp-0078 EMJ06874 Prunus persica 58 2e-25 114
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 60 3e-25 112
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 58 2e-24 110
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 50 6e-24 108
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 51 7e-24 108
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 52 8e-24 108
WERAM-Met-0051 KEH38943 Medicago truncatula 54 3e-23 106
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 49 3e-23 106
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 55 3e-23 106
WERAM-Art-0083 AT3G44750.1 Arabidopsis thaliana 54 1e-22 104
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 53 3e-20 96.3
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 53 3e-20 96.3
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 41 8e-17 85.1
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 37 6e-12 68.9
WERAM-Orm-0014 OMERI01G38240.2 Oryza meridionalis 40 1e-10 64.7
WERAM-Amt-0052 ERN12770 Amborella trichopoda 62 2e-09 60.8
Created Date 25-Jun-2016