WERAM Information

Tag Content
WERAM ID WERAM-Orp-0054
Ensembl Protein ID OPUNC05G25830.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OPUNC05G25830 OPUNC05G25830.1 OPUNC05G25830.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 1.00e-22 103
Organism Oryza punctata
Domain Profile
  HDAC HD2
Query: 1  MEFWGLEVKPGQTVKCEPEDERFLHLSQAALGESKKGSDNAVMYVKTDDQKLVIGTLSAD 60
          MEFWG+ V P    K  PE++  +H+SQA+L  + K  ++ V+ V     KLVIGTLS D
Sbjct: 1  MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 61 KFPQIQFDLVFDKEFELSHTSKTAN 85
          KFPQI FDLVFDKEFELSH+   AN
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKAN 85
Query: 172 TPKKPE-TGKRKAAEIVLKTPSSDKKAKI-----ATPSGD---KKGVHVATPHPAKQASK 222
           TPKKPE   K++  E V KTP S KKAK      +TP      KKG H ATPHPAK+  K
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGK 258
Query: 223 TPVN 226
           +PVN
Sbjct: 259 SPVN 262
Protein Sequence
(Fasta)		MEFWGLEVKP GQTVKCEPED ERFLHLSQAA LGESKKGSDN AVMYVKTDDQ KLVIGTLSAD 60
KFPQIQFDLV FDKEFELSHT SKTANEEEEE KIIPAPKANG KVEGKENERK KQGKTDSSAS 120
KSKAAVNDED DDDSDEDDSE DEDLSPEDDD DDDSSEDDSS EDDEDESDEE ETPKKPETGK 180
RKAAEIVLKT PSSDKKAKIA TPSGDKKGVH VATPHPAKQA SKTPVNDKAK EKSPKSGGGS 240
ISCKSCSKTF NSEMALQSHS KAKHPAK 267
Nucleotide Sequence
(Fasta)		ATGGAGTTCT GGGGTCTTGA AGTCAAGCCT GGACAAACTG TCAAATGTGA GCCTGAAGAT 60
GAACGCTTTT TGCACCTTTC TCAGGCTGCT CTTGGGGAAT CAAAGAAAGG ATCTGACAAT 120
GCAGTGATGT ATGTTAAAAC TGATGATCAA AAGCTAGTCA TTGGAACACT CTCAGCTGAC 180
AAGTTCCCTC AAATCCAATT TGATTTGGTC TTTGACAAAG AGTTCGAGCT GTCACACACT 240
TCAAAGACTG CTAATGAAGA GGAGGAAGAA AAGATCATTC CTGCTCCCAA GGCAAATGGC 300
AAAGTTGAAG GGAAGGAAAA TGAGCGGAAA AAACAAGGCA AGACAGATTC TTCAGCTTCA 360
AAATCAAAGG CTGCAGTGAA TGATGAGGAT GATGATGACA GCGATGAGGA TGATTCTGAG 420
GACGAAGATC TTTCTCCTGA GGATGATGAT GATGATGATT CTTCTGAGGA TGATTCCAGC 480
GAAGATGATG AGGATGAGAG TGACGAGGAA GAGACTCCAA AGAAGCCAGA GACTGGAAAG 540
AGGAAAGCAG CTGAAATTGT GTTGAAGACA CCTTCGTCTG ATAAGAAAGC AAAGATTGCT 600
ACACCATCAG GTGACAAGAA GGGTGTCCAT GTAGCAACTC CACATCCGGC AAAACAGGCT 660
AGCAAGACCC CTGTGAATGA TAAGGCAAAG GAGAAGTCCC CAAAATCCGG TGGTGGGTCA 720
ATTTCTTGCA AGTCATGCAG CAAGACGTTC AACAGTGAAA TGGCTCTGCA ATCTCACTCG 780
AAGGCCAAGC ACCCCGCCAA GTGA 805
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 85 3e-88 322
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 79 6e-85 310
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 80 6e-85 310
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 76 2e-75 279
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 96 2e-43 173
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 91 2e-43 173
WERAM-Sei-0085 Si022778m Setaria italica 84 1e-36 150
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 84 5e-36 148
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 79 4e-34 142
WERAM-Aet-0097 EMT09079 Aegilops tauschii 75 5e-32 135
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 74 2e-31 133
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 78 6e-30 128
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 65 7e-30 127
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 71 2e-29 126
WERAM-Prp-0078 EMJ06874 Prunus persica 62 2e-26 117
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 62 2e-25 112
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 60 1e-24 110
WERAM-Thc-0115 EOY33573 Theobroma cacao 55 1e-23 107
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 60 1e-23 107
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 60 2e-23 107
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 59 2e-23 107
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 55 1e-22 104
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 55 2e-22 103
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 55 2e-22 103
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 57 3e-22 102
WERAM-Met-0051 KEH38943 Medicago truncatula 56 3e-22 102
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 56 4e-21 99.0
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 56 4e-21 99.0
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 52 8e-21 97.8
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 54 2e-20 96.7
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 49 7e-20 95.1
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 42 4e-16 82.4
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 39 1e-10 64.3
WERAM-Orm-0014 OMERI01G38240.2 Oryza meridionalis 42 6e-10 62.0
WERAM-Amt-0052 ERN12770 Amborella trichopoda 61 5e-07 52.0
Created Date 25-Jun-2016