WERAM Information

Tag Content
WERAM ID WERAM-Orm-0014
Ensembl Protein ID OMERI01G38240.2
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OMERI01G38240 OMERI01G38240.2 OMERI01G38240.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 9.00e-10 61
Organism Oryza meridionalis
Domain Profile
  HDAC HD2
Query: 237 YVHVATPYPAKQAKKRTANNDMSE--------HSAG-YACKSCNKTFNTSMGLEAHSKAK 287
           +VHVATP+P+KQA K +      E         SAG + CKSC +TF + MGL++H+KAK
Sbjct: 230 HVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAK 289
Query: 288 HTA 290
           H+A
Sbjct: 290 HSA 292
Query: 5   MGFWGVAVRPGETVMCDPPGEFYYHISQIALEPGELN--ENVQVFVEVDGKRILLGTLSV 62
           M FWGV V+ G+ +  DP  +   HISQ+AL   + N  E +Q++V V   ++L+GTLS 
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60
Query: 63  EHRDESDEEVPLAIPLFPNSDDDKIKEVQNSPSKFATLKSAAAASPTPEAIVEER 117
           E   +   E+ L            +     + S F +     A+ P PE +++++
Sbjct: 61  EKFPQLSTEIVLERNF-------ALSHTWKNGSVFFSGYKVDASDPEPEDLIDDQ 108
Protein Sequence
(Fasta)		METTMGFWGV AVRPGETVMC DPPGEFYYHI SQIALEPGEL NENVQVFVEV DGKRILLGTL 60
SVEHRDESDE EVPLAIPLFP NSDDDKIKEV QNSPSKFATL KSAAAASPTP EAIVEERKNY 120
GKSEADDDDS DEESDASGAD EYDDDEDMID KQDSSDDDDG DSSDEEETPS KNIKGNRHVE 180
TPLNTPQKRA RLATPIMDSK AGTGKRSGYV HVATPYPAKQ AKKTSVNNDM AKQSSGYVHV 240
ATPYPAKQAK KRTANNDMSE HSAGYACKSC NKTFNTSMGL EAHSKAKHTA TK 292
Nucleotide Sequence
(Fasta)		CCAGCCTCGG CCTCCTCGCA AACGAAGGAA AATCAGAAGA GAAGAAGCGA AAGCGACGCC 60
GCCTCCACTC CGCCGCGCGG CTGCTCTCTC CCTCTCTAAA ACCCTAGCAG AGGAGCACGG 120
CGAGGCGAAG AGAGGAGAGG AGGGGGAAGG AGGGAGAGGC CACGGGGAAC GCGATCGCCT 180
TCGTGCCGCC CATGGAGACG ACCATGGGGT TCTGGGGAGT TGCTGTCAGA CCTGGAGAGA 240
CAGTGATGTG TGATCCACCA GGAGAATTCT ATTATCATAT TTCACAGATA GCGTTAGAAC 300
CTGGTGAGCT GAATGAGAAC GTGCAAGTTT TTGTTGAAGT TGATGGTAAA AGGATTCTGC 360
TCGGCACACT TTCAGTTGAA CATCGTGATG AATCTGATGA GGAGGTTCCA CTGGCTATTC 420
CACTATTCCC CAATTCAGAT GATGATAAGA TCAAAGAAGT TCAAAACAGT CCAAGTAAGT 480
TTGCCACACT TAAGTCTGCT GCTGCTGCAT CCCCTACACC AGAGGCTATT GTAGAGGAAA 540
GAAAGAATTA TGGGAAATCA GAAGCTGATG ATGATGACAG CGATGAAGAA AGTGATGCTT 600
CAGGCGCGGA TGAATATGAT GATGATGAGG ATATGATTGA TAAACAGGAT TCTAGTGATG 660
ATGATGATGG TGATAGTTCG GATGAAGAAG AGACTCCTTC AAAGAATATT AAAGGCAATA 720
GGCATGTGGA AACACCCTTG AACACTCCAC AGAAAAGGGC AAGGCTAGCA ACCCCAATTA 780
TGGACAGCAA AGCTGGAACT GGCAAGAGAA GTGGCTATGT CCATGTTGCG ACTCCTTATC 840
CAGCAAAACA GGCAAAGAAG ACATCTGTAA ACAATGACAT GGCTAAGCAA TCCTCTGGCT 900
ATGTCCACGT TGCGACCCCT TATCCAGCAA AACAGGCAAA GAAGAGGACT GCCAATAATG 960
ACATGTCTGA GCATTCTGCT GGTTATGCCT GCAAGTCATG CAACAAGACT TTCAACACCT 1020
CTATGGGTCT GGAAGCTCAT TCCAAGGCGA AACACACTGC AACTAAGTGA TCTGAAATAC 1080
CTTCTGCACA ATCCTGTGTA GGTGTGTTAG TGATAGGTAA CTGAATTCTG AAGCTGGAGA 1140
TCCAGATATT TTGATGAAGC ACAATTTTGG AGCACTTGCC AAGTTTCTGA AACATGTAGA 1200
TATATGGCGC TTTTTTAATG AATGCATATG GATGTTGCAC GTTTCATTGT TCTGGGATCT 1260
GCTCTTCTTT TTTTTTTTTT ACTGAGTGTA TTTGGACGGA CAAAATCTGG TTTAACGATC 1320
CCAATACCGG TATCAAAAAC TGCTCGTATC GGACACAATC TGGGTTAACG ATCCCAATAC 1380
CGGGATCAAA AACTACTCGT ATGGTATCTT TGGATTTCGT GGGAACCAAT GATAAACCAA 1440
CAAAAAC 1448
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 73 3e-62 236
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 32 8e-15 78.2
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 44 1e-14 77.8
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 46 4e-13 72.4
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 45 4e-12 69.3
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 47 5e-12 68.9
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 43 1e-11 67.8
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 45 1e-11 67.4
WERAM-Sob-0059 Sb03g043350.1 Sorghum bicolor 52 1e-11 67.4
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 45 2e-11 67.0
WERAM-Aet-0097 EMT09079 Aegilops tauschii 46 2e-11 67.0
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 45 2e-11 67.0
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 45 2e-11 66.6
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 45 2e-11 66.6
WERAM-Sei-0085 Si022778m Setaria italica 44 4e-11 65.9
WERAM-Prp-0077 EMJ03579 Prunus persica 48 7e-11 65.1
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 43 9e-11 64.7
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 42 2e-10 63.5
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 42 2e-10 63.5
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 44 2e-10 63.5
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 45 9e-10 61.6
WERAM-Art-0114 AT5G03740.1 Arabidopsis thaliana 48 1e-09 60.8
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 43 1e-09 60.8
WERAM-Arl-0026 fgenesh1_pg.C_scaffold_6000249 Arabidopsis lyrata 44 7e-09 58.5
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 43 8e-09 58.2
WERAM-Brr-0050 Bra009513.1-P Brassica rapa 43 9e-09 58.2
WERAM-Thc-0115 EOY33573 Theobroma cacao 43 1e-08 57.8
WERAM-Bro-0186 Bo9g181760.1 Brassica oleracea 40 2e-08 57.0
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 44 4e-08 55.8
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 48 5e-08 55.8
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 48 5e-08 55.8
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 42 2e-07 53.9
WERAM-Met-0051 KEH38943 Medicago truncatula 35 3e-07 53.1
Created Date 25-Jun-2016