WERAM Information

Tag Content
WERAM ID WERAM-Hov-0097
Ensembl Protein ID MLOC_70585.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MLOC_70585 MLOC_70585.1 MLOC_70585.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 6.00e-24 108
Organism Hordeum vulgare
Domain Profile
  HDAC HD2
Query: 1  MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVRVDGGQKLAIGTLSMD 60
          MEFWG+ V P  + KV+PE+D  +H+SQA+L    K  ++ +     GG KL IGTLS D
Sbjct: 1  MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 61 KFPQIQFDLVFEKEFELSHNSKTTSVFFSGY 91
          KFPQI FDLVF+KEFELSH+    +V F GY
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGY 91
Query: 214 TPKKQE-TGKKRAAGSDIKTPVA-----DKKAKIATPSGQKTGDKKGAVHVATPHPAKKV 267
           TPKK E   KKR   S  KTPV+        A  +TP  QKT +KK   H ATPHPAKK 
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTP--QKTEEKKKGGHTATPHPAKKG 256
Query: 268 GKTPATSDKSPKSGG-SVACKSCTKTFNS 295
           GK+P  +++SPKSGG S    +  K FNS
Sbjct: 257 GKSPVNANQSPKSGGQSSGGNNNKKPFNS 285
Protein Sequence
(Fasta)		MEFWGLEVKP NQSIKVSPED DHFLHLSQAA LGEVKKDDKT TLFVRVDGGQ KLAIGTLSMD 60
KFPQIQFDLV FEKEFELSHN SKTTSVFFSG YNVFQPAQGD EMDFDSEDES ESEDEQEPII 120
PPVAKENGKP EAKEQKKQVL IDTGSSKSKA AAKDIGKSKK DDDSDDDGSD DDDSEDDSAD 180
GALIPMGDDS DDSEEGDEDS DSDEDSSDEE EEETPKKQET GKKRAAGSDI KTPVADKKAK 240
IATPSGQKTG DKKGAVHVAT PHPAKKVGKT PATSDKSPKS GGSVACKSCT KTFNSEVALA 300
SHAKAKHAAK
Nucleotide Sequence
(Fasta)		CGCCGCCGCC GGTTGCCATG GAGTTCTGGG GCCTCGAGGT TAAGCCTAAC CAGTCCATCA 60
AGGTTTCTCC TGAAGATGAC CACTTTCTCC ATCTCTCCCA GGCTGCCCTT GGTGAGGTCA 120
AGAAGGATGA CAAGACAACC TTGTTTGTCA GGGTCGACGG CGGCCAGAAG CTAGCCATCG 180
GGACCCTCTC TATGGACAAG TTCCCTCAGA TCCAGTTCGA CCTCGTCTTC GAAAAGGAAT 240
TTGAGCTGTC ACACAATTCC AAGACAACAA GCGTCTTCTT CTCTGGCTAC AATGTTTTCC 300
AACCTGCCCA GGGAGATGAG ATGGATTTTG ATTCTGAAGA TGAGTCTGAG TCTGAGGATG 360
AGCAGGAGCC CATCATTCCG CCAGTCGCCA AGGAAAACGG CAAACCTGAA GCCAAGGAGC 420
AGAAGAAGCA GGTTTTAATT GACACTGGAT CTTCAAAATC AAAGGCCGCT GCCAAGGACA 480
TTGGAAAATC TAAGAAGGAT GATGACAGTG ATGATGATGG CAGTGATGAC GACGACAGCG 540
AAGATGACTC TGCTGATGGA GCATTGATTC CCATGGGGGA TGATTCTGAT GATAGTGAGG 600
AGGGTGATGA GGACTCTGAC TCCGACGAGG ACAGCTCTGA CGAGGAGGAA GAAGAAACAC 660
CCAAGAAGCA AGAGACTGGG AAGAAGAGGG CGGCTGGAAG TGATATTAAG ACCCCTGTTG 720
CTGACAAGAA GGCCAAAATT GCAACACCAT CAGGCCAGAA AACAGGTGAC AAGAAGGGGG 780
CTGTCCATGT TGCGACCCCG CACCCGGCCA AGAAGGTAGG CAAGACCCCA GCAACCAGCG 840
ACAAGTCGCC CAAGTCTGGA GGGTCGGTGG CCTGCAAGTC GTGCACCAAG ACATTCAACA 900
GCGAGGTTGC TCTAGCTTCG CACGCCAAGG CCAAGCACGC GGCCAAGTGA AGAGGAGAGG 960
AGAGGAGAGG GGGATGTTGG TTGGCTGGCT GGGTTGAGTC AGTTACTATT TTGATTGATG 1020
TGTTCTTGCC CTATGAGACT ATCAGTTACG CTGGTGTTTT AGGCTACCTA TCTATTATCT 1080
ATGTTGTCGT GTTCCCTACC TAGCCTGAGC CTGAGGGAAG GGAGAAAACC GTTGATCTGT 1140
TAGTGATTGA TGAGTCGAAT CGAAGGAAGC TGTTGTGGTT CGGAAATTGA ATTGGTTGGT 1200
GGTATGCTAT GCTATGCTAT GATGAAGCTT TGAATGAATG 1241
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 65 2e-83 306
WERAM-Aet-0097 EMT09079 Aegilops tauschii 73 3e-83 305
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 73 2e-39 160
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 59 1e-37 154
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 65 2e-37 153
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 65 2e-37 153
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 75 1e-36 150
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 64 2e-36 150
WERAM-Sei-0085 Si022778m Setaria italica 64 2e-36 150
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 70 1e-31 134
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 71 7e-30 128
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 71 7e-30 128
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 70 2e-29 127
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 60 1e-27 120
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 58 2e-27 120
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 60 3e-27 119
WERAM-Thc-0115 EOY33573 Theobroma cacao 58 5e-27 119
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 59 1e-26 117
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 60 3e-26 116
WERAM-Pot-0048 POPTR_0004s20020.1 Populus trichocarpa 57 1e-25 114
WERAM-Met-0051 KEH38943 Medicago truncatula 48 5e-24 108
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 60 5e-24 108
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 54 8e-24 108
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 59 1e-23 107
WERAM-Prp-0078 EMJ06874 Prunus persica 56 2e-23 107
WERAM-Arl-0013 Al_scaffold_0006_2135 Arabidopsis lyrata 56 7e-22 101
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 51 6e-21 99.0
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 46 1e-19 94.7
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 46 4e-18 89.4
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 44 5e-18 89.0
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 49 6e-18 89.0
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 49 6e-18 89.0
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 40 3e-12 69.7
WERAM-Amt-0052 ERN12770 Amborella trichopoda 63 4e-10 62.8
WERAM-Orm-0015 OMERI01G38270.1 Oryza meridionalis 36 2e-08 57.4
Created Date 25-Jun-2016