WERAM Information

Tag Content
WERAM ID WERAM-Ori-0055
Ensembl Protein ID BGIOSGA017430-PA
Gene Name OsI_21251
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BGIOSGA017430 BGIOSGA017430-TA BGIOSGA017430-PA
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 1.00e-24 110
Organism Oryza indica
Domain Profile
  HDAC HD2
Query: 1  MEFWGLEVKPGQTVKCEPEDERFLHLSQAALGESKKGSDNAVMYVKTDDQKLVIGTLSAD 60
          MEFWG+ V P    K  PE++  +H+SQA+L  + K  ++ V+ V     KLVIGTLS D
Sbjct: 1  MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 61 KFPQIQFDLVFDKEFELSHTSKTASVFFSGYK 92
          KFPQI FDLVFDKEFELSH+   A+V F GYK
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYK 92
Query: 198 TPKKPE-TGKRKVAEIVLKTPSSDKKAKI-----ATPSGQKTGDKK-GVHVATPHPAKQA 250
           TPKKPE   K++  E V KTP S KKAK      +TP  QKT +KK G H ATPHPAK+ 
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTP--QKTEEKKKGGHTATPHPAKKG 256
Query: 251 SKTPVN 256
            K+PVN
Sbjct: 257 GKSPVN 262
Protein Sequence
(Fasta)		MEFWGLEVKP GQTVKCEPED ERFLHLSQAA LGESKKGSDN AVMYVKTDDQ KLVIGTLSAD 60
KFPQIQFDLV FDKEFELSHT SKTASVFFSG YKVSQPAEED EMDFDSEEVE DEEEEEKIIP 120
APRANGKVEG KENEQKKQGK TDSSASKSKA AVNDDDDDDD SDEDDSEDED LSPEDDDDDS 180
SEDDSSEDDE DESDEEETPK KPETGKRKVA EIVLKTPSSD KKAKIATPSG QKTGDKKGVH 240
VATPHPAKQA SKTPVNDKSK EKSPKSGGGS ISCKSCSKTF NSEMALQSHS KAKHPAK 297
Nucleotide Sequence
(Fasta)		ATGGAGTTCT GGGGTCTTGA AGTCAAGCCT GGACAGACTG TCAAATGTGA GCCTGAAGAT 60
GAACGCTTTT TGCACCTTTC TCAGGCTGCT CTTGGGGAAT CAAAGAAAGG ATCTGACAAT 120
GCAGTAATGT ATGTTAAAAC TGATGATCAA AAGCTAGTCA TTGGAACCCT CTCAGCTGAC 180
AAGTTCCCTC AAATCCAGTT TGATTTGGTC TTTGACAAAG AGTTTGAGCT GTCACACACT 240
TCAAAGACTG CTAGTGTGTT CTTTTCTGGC TACAAAGTTT CCCAGCCGGC TGAGGAAGAT 300
GAAATGGATT TTGATTCTGA AGAAGTTGAA GATGAAGAGG AGGAAGAAAA GATCATTCCA 360
GCTCCCAGGG CAAATGGCAA AGTTGAAGGG AAGGAAAATG AGCAGAAAAA ACAAGGCAAG 420
ACAGATTCTT CAGCTTCAAA ATCAAAGGCT GCAGTGAATG ACGATGATGA TGATGATGAC 480
AGTGATGAGG ATGATTCTGA GGACGAAGAT CTTTCTCCTG AGGATGATGA TGATGATTCT 540
TCTGAGGATG ATTCCAGCGA AGATGATGAG GATGAGAGTG ACGAGGAAGA AACTCCCAAG 600
AAGCCAGAGA CTGGAAAGAG GAAAGTAGCT GAAATTGTGT TGAAGACACC TTCGTCTGAT 660
AAGAAAGCAA AGATTGCTAC ACCGTCAGGC CAGAAGACAG GTGACAAGAA GGGTGTCCAT 720
GTAGCAACTC CACATCCGGC AAAGCAGGCT AGCAAGACCC CCGTGAATGA CAAGTCAAAG 780
GAGAAGTCCC CAAAATCCGG TGGTGGGTCA ATTTCTTGCA AGTCATGCAG CAAGACGTTC 840
AACAGTGAAA TGGCTCTGCA ATCTCACTCG AAGGCCAAGC ACCCCGCCAA GTGA 895
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 100 2e-95 346
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 80 2e-83 306
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 83 2e-80 296
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 96 1e-53 207
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 95 1e-48 190
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 92 1e-43 173
WERAM-Sei-0085 Si022778m Setaria italica 85 2e-43 173
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 85 1e-42 171
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 81 8e-41 164
WERAM-Aet-0097 EMT09079 Aegilops tauschii 78 6e-37 151
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 77 2e-36 150
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 73 6e-36 148
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 64 9e-34 141
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 78 1e-32 137
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 62 7e-30 128
WERAM-Prp-0078 EMJ06874 Prunus persica 62 1e-29 127
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 61 1e-28 124
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 58 4e-28 122
WERAM-Thc-0115 EOY33573 Theobroma cacao 56 9e-28 121
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 58 5e-27 119
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 56 6e-27 118
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 55 2e-26 116
WERAM-Met-0051 KEH38943 Medicago truncatula 58 1e-25 114
WERAM-Bro-0186 Bo9g181760.1 Brassica oleracea 55 1e-25 114
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 60 2e-25 113
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 55 2e-24 110
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 49 6e-24 108
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 54 7e-24 108
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 49 3e-23 106
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 57 7e-23 105
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 57 7e-23 105
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 44 2e-19 94.0
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 39 3e-13 73.2
WERAM-Amt-0052 ERN12770 Amborella trichopoda 64 7e-11 65.1
WERAM-Orm-0014 OMERI01G38240.2 Oryza meridionalis 42 1e-09 60.8
Created Date 25-Jun-2016