WERAM Information

Tag Content
WERAM ID WERAM-Pot-0164
Ensembl Protein ID POPTR_0018s05470.1
Gene Name POPTR_0018s05470g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0018s05470 POPTR_0018s05470.1 POPTR_0018s05470.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-12 48.9 115 165
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  POPTR_0018s05470.1 115 TLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSN 165
                         78****99999999********************666664479******86 PP
Protein Sequence
(Fasta)		MQEKDWLSLV AVHSDAWLLS VAFYFGSRFG FDKADRKRLF SMINDLPTIF EVVTGTAKKQ 60
VKEKSSVSNH SSNKTKSNSK QRGSESQGKY SKAMQAKDED DEGLDEEDEE DHGETLCGAC 120
GENYASDEFW ICCDICEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARP
Nucleotide Sequence
(Fasta)		TGCAGAGAAG GAGAATCTTT GCCTTTACGG ATTTCCTAGT GAGCAGTGGG AGGTCAATTT 60
ACCTGCTGAA GAGGTGCCTC CAGAGCTTCC AGAACCTGCT TTAGGCATCA ACTTTGCCAG 120
AGATGGGATG CAAGAAAAGG ACTGGTTGTC TCTGGTTGCT GTTCACAGTG ATGCATGGTT 180
ACTTTCTGTG GCCTTCTATT TTGGGTCTAG GTTTGGATTT GACAAAGCTG ATAGAAAACG 240
CCTTTTCAGC ATGATAAATG ATCTTCCAAC AATATTTGAG GTGGTGACCG GAACGGCCAA 300
GAAACAAGTA AAAGAGAAGT CATCAGTTTC GAATCACAGC AGTAATAAAA CTAAATCAAA 360
CTCAAAGCAG CGAGGTTCTG AATCCCAGGG CAAATATTCA AAGGCAATGC AAGCAAAAGA 420
TGAAGACGAC GAGGGCTTGG ATGAAGAAGA TGAAGAAGAT CATGGAGAGA CTCTATGCGG 480
TGCTTGTGGA GAAAACTATG CCTCTGATGA ATTCTGGATT TGCTGTGACA TCTGCGAGAA 540
GTGGTTCCAT GGAAAATGTG TTAAGATCAC CCCAGCTAGG GCTGAGCATA TCAAGCAGTA 600
CAAATGCCCA TCTTGCAGCA ACAAGAGAGC ACGGCCTTGA TGATTACCGG GTAGCTTGCT 660
CTGTGTAATA TGGCATGTGG GACTGCTAAC TGTTTAGTAG GTCAGGTTTG TTCGTAGTCA 720
TGTGTCTTTG ATCTAGGAAA AACTAATCGG ATGCTATGTG TAGGCTGCAA AATGTGCTGT 780
TTATTTGATC ATAAATTAGG ATATTTGTAT ACTTTCAGCT TGGGAACCAT TTTCCCATGA 840
TTGGGACAAG TGCTTGTTTT ATTTCTGTGA CATGATGTTT ATATGCAATC TGTCCAGTTC 900
TCTGAAGACT GTTTACCC 919
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0104 EOY29997 Theobroma cacao 88 2e-69 258
WERAM-Prp-0082 EMJ27202 Prunus persica 85 1e-68 256
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 88 5e-67 250
WERAM-Viv-0016 VIT_04s0008g01670.t01 Vitis vinifera 88 2e-66 248
WERAM-Amt-0088 ERM99796 Amborella trichopoda 77 8e-63 236
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 75 2e-62 234
WERAM-Met-0172 KEH18446 Medicago truncatula 78 2e-61 231
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 73 2e-61 231
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 69 9e-60 226
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 75 1e-59 226
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 71 8e-59 223
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 74 2e-56 215
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 67 1e-54 209
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 59 1e-53 205
WERAM-Orbr-0016 OB01G48580.1 Oryza brachyantha 65 2e-53 205
WERAM-Sei-0012 Si002638m Setaria italica 66 3e-53 204
WERAM-Orp-0023 OPUNC02G18840.1 Oryza punctata 65 5e-53 203
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 66 9e-53 202
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 66 9e-53 202
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 66 9e-53 202
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 66 9e-53 202
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 66 9e-53 202
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 66 9e-53 202
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 66 9e-53 202
WERAM-Zem-0097 GRMZM2G172001_P02 Zea mays 63 1e-52 202
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 66 1e-52 202
WERAM-Sob-0057 Sb03g042180.1 Sorghum bicolor 65 1e-52 202
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 66 2e-52 201
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 64 4e-52 201
WERAM-Tra-0012 Traes_1BL_1B2A57A5B.1 Triticum aestivum 65 7e-52 199
WERAM-Aet-0106 EMT19247 Aegilops tauschii 65 9e-52 199
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 62 2e-50 195
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 66 1e-48 189
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 61 2e-45 179
WERAM-Tru-0076 TRIUR3_28057-P1 Triticum urartu 57 4e-44 174
Created Date 25-Jun-2016