WERAM Information

Tag Content
WERAM ID WERAM-Pot-0125
Ensembl Protein ID POPTR_0011s09870.1
Gene Name POPTR_0011s09870g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0011s09870 POPTR_0011s09870.1 POPTR_0011s09870.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.80e-26 91.3 2 72
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt  2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71
                        +h++ ++F+ pvd + l+++dY++iik+PmdL t+k+rl ++ Y+sp+ef++Dvrl fnNa++yne++++v
  POPTR_0011s09870.1  2 KHQYGWVFNVPVDVKmLKLHDYFKIIKHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTFNNAMKYNEKGQDV 72
                        799****************************************************************9987 PP
Protein Sequence
(Fasta)		MKHQYGWVFN VPVDVKMLKL HDYFKIIKHP MDLGTVKSRL SKNWYKSPKE FAEDVRLTFN 60
NAMKYNEKGQ DVHTMADTLL KIFEENWANF KAETNFDKRG EMGYDASLQT PASKRASGPH 120
ASSPACGSAS ACAPSPAPFQ QTMPLETRTL GGTDSLTELG HPNMKAADQG RASVSKKPKK 180
DTDKSKMTYE EKQKLSISLQ SLPSEKLESV VQIIRKRNPG LFQQEDEIEV DIDSFDNETL 240
WELHSNVTNY RKSISKNDRE AKVALQDREE GGHDMLGTKL TSATAEAPKE LGSVQMTVPA 300
SSPIKEHKQG HCMSRSRCSS SFGSGSRSSS SGSDIDSSSG SGSDAGR 347
Nucleotide Sequence
(Fasta)		GTAATAGTGG TGGTCATAGA ATTGAAACTC TTGATAGGGT TAATTCTGAA GTTAGTTATG 60
TGGGACACAC CAATTCGCGG CCGTTGGATG GTAATGAGAA GAAGAAAACC CCGGTGAATT 120
CGAACAAGAA GTTGAAACAG TGTGGCGGTG GTGGGGGACA AGGGGTGGCG GTGGAGTTCA 180
GTAAATATTT GGTTAAAGAG TGTGGGGAGT TGTTAGGGAA GTTAATGAAA CATCAATATG 240
GATGGGTGTT TAATGTGCCA GTGGATGTGA AAATGTTGAA GTTGCATGAT TATTTTAAGA 300
TTATTAAGCA TCCAATGGAT TTAGGGACAG TGAAGAGTAG GCTGAGTAAG AATTGGTATA 360
AGTCGCCAAA GGAGTTTGCT GAGGATGTTA GGTTGACTTT TAATAATGCT ATGAAGTATA 420
ATGAGAAAGG GCAGGATGTG CATACAATGG CAGATACATT GTTGAAGATT TTCGAGGAGA 480
ATTGGGCTAA TTTTAAGGCT GAAACTAATT TTGATAAGAG GGGGGAGATG GGGTACGATG 540
CTAGCTTGCA AACACCTGCG TCAAAGAGAG CTTCAGGTCC TCATGCTTCA TCCCCTGCTT 600
GTGGTTCTGC TTCTGCCTGT GCTCCCAGTC CTGCTCCTTT TCAACAGACA ATGCCTTTAG 660
AGACGAGAAC TTTGGGTGGA ACAGATTCTT TGACAGAGCT TGGGCATCCA AATATGAAAG 720
CTGCTGATCA GGGTAGGGCA TCAGTGTCGA AGAAGCCTAA GAAGGACACT GACAAAAGCA 780
AAATGACTTA CGAGGAGAAG CAGAAACTGA GTATAAGCCT GCAGAGTTTA CCTTCAGAGA 840
AACTAGAATC AGTTGTCCAG ATTATTAGGA AGAGGAATCC TGGGCTTTTT CAACAAGAAG 900
ATGAGATTGA AGTGGATATT GATAGTTTTG ATAATGAAAC ACTTTGGGAA CTTCATAGTA 960
ATGTAACCAA TTACCGGAAG AGTATAAGCA AGAATGACAG AGAAGCTAAA GTTGCTCTTC 1020
AAGATAGAGA AGAAGGTGGC CACGATATGC TCGGGACTAA ATTGACATCT GCTACTGCAG 1080
AGGCACCAAA GGAACTTGGA TCAGTACAAA TGACTGTTCC CGCCTCTTCA CCTATTAAAG 1140
AGCATAAGCA AGGCCATTGT ATGAGCAGAT CACGTTGTTC AAGCAGTTTT GGCAGTGGCT 1200
CCAGATCTTC TTCAAGTGGC TCTGATATTG ATAGTTCATC AGGATCTGGG TCAGATGCAG 1260
GTCGTTGACA TAGGAGTTAG TAGATTCAAT TCAGGCAGGG GCATCATCTT TGGTTAGAAT 1320
CCTAATCGTC TCTTCTTTAT CTATCATTCA TGGTAATTGT AAATTTTCCA TTCAACCTTG 1380
ACGATATTGG ACATTTGCCT GTCAAAATAA TCATTATGGA AGCATTAGCT GCTCGTTAAT 1440
T 1442
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0085 EOY13187 Theobroma cacao 55 2e-80 296
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 54 1e-77 287
WERAM-Prp-0055 EMJ15030 Prunus persica 51 4e-77 285
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 50 1e-72 270
WERAM-Met-0054 KEH39252 Medicago truncatula 52 1e-69 260
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 50 1e-67 253
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 53 2e-67 253
WERAM-Mua-0014 GSMUA_Achr10P27900_001 Musa acuminata 47 2e-64 243
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 48 2e-61 233
WERAM-Brr-0160 Bra032431.1-P Brassica rapa 43 4e-59 225
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 46 6e-59 225
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 46 1e-58 224
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 47 2e-58 223
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 47 2e-58 223
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 47 4e-58 222
WERAM-Aet-0058 EMT09500 Aegilops tauschii 47 6e-58 221
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 47 7e-58 221
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 47 7e-58 221
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 46 8e-58 221
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 47 8e-58 221
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 47 1e-57 221
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 47 2e-57 220
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 47 2e-57 219
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 47 4e-57 219
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 46 8e-57 218
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 46 9e-57 218
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 48 3e-56 216
WERAM-Sei-0009 Si001167m Setaria italica 47 5e-56 215
WERAM-Arl-0033 fgenesh1_pm.C_scaffold_2001298 Arabidopsis lyrata 41 5e-55 212
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 44 1e-52 204
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 44 2e-52 203
WERAM-Amt-0058 ERN18099 Amborella trichopoda 45 2e-50 196
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 65 2e-35 147
WERAM-Php-0010 PP1S12_269V6.1 Physcomitrella patens 34 1e-28 124
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 56 6e-27 119
WERAM-Chr-0016 EDP01011 Chlamydomonas reinhardtii 31 5e-22 102
Created Date 25-Jun-2016