WERAM Information

Tag Content
WERAM ID WERAM-Sot-0055
Ensembl Protein ID PGSC0003DMT400047018
Gene Name PGSC0003DMG400018261
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400018261 PGSC0003DMT400047018 PGSC0003DMT400047018
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.70e-12 48.7 193 243
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                           t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC  
  PGSC0003DMT400047018 193 TLCGACGDNYATDEFWICCDICERWFHGKCVKITPAKAEHIKQYKCPSCSS 243
                           68*****999999*********************555554479******85 PP
Protein Sequence
(Fasta)		MENSVPRTVE EVFSDFKSRR AALIKALTTD VEKFYQQCDP EKENLCLYGL PNETWEVNLP 60
VEEVPPELPE PALGINFARD GMQEKDWLSL VAVHSDSWLL SVAFYFGARF GFGKSERKRL 120
FQMINDLPTV FEVVTGAAKQ TRDPPHNNSN KSKSSGKPRQ PESQLKAVKV SPSKMENDSG 180
EEEEEEEDEQ GATLCGACGD NYATDEFWIC CDICERWFHG KCVKITPAKA EHIKQYKCPS 240
CSSKRAKV 248
Nucleotide Sequence
(Fasta)		TTTCCCTCTC TTCCCGCTGT TTTGGTCTCA TTCTCCTCTT TCTCTCCCTA CAATTTCTGC 60
AACTTTACTT CTTACAATTT TCTCATAAAA ATCTAAGCTT TTTCTTTATG AAATCTTCAT 120
TTTCACTTCA CATAGCAAAC TAATTTTCAA ATTTTGAGCA ACATGAAGTG GAAACTTTAG 180
TTCTTGGGGA AAACCCTAAT TTATTTCAAC CCACTTCTTG TTTTTTTTTT TCAAAGACTC 240
AATTTTTTTC TTCTTGTGGG GTTGTTAGAA ATTGCGTGTA GACAAGGGTA GTATGGAAAA 300
TTCGGTACCC AGGACTGTAG AAGAAGTATT CAGCGATTTC AAAAGTCGTA GAGCTGCTTT 360
AATTAAAGCC CTTACCACAG ATGTTGAGAA GTTTTATCAG CAGTGTGATC CTGAAAAGGA 420
GAACTTGTGT CTCTATGGGC TTCCTAATGA AACATGGGAA GTAAACCTCC CGGTGGAAGA 480
GGTCCCTCCA GAACTTCCGG AACCAGCATT GGGCATAAAT TTTGCACGTG ATGGAATGCA 540
AGAAAAAGAC TGGTTATCAC TTGTTGCTGT TCACAGTGAT TCATGGCTGC TTTCTGTTGC 600
ATTTTACTTT GGTGCAAGGT TTGGGTTCGG CAAGAGTGAA AGGAAGAGGC TTTTCCAAAT 660
GATAAATGAT CTCCCAACAG TGTTTGAAGT TGTTACCGGA GCTGCTAAAC AGACACGTGA 720
TCCCCCTCAC AACAATAGCA ACAAAAGCAA ATCAAGTGGA AAGCCTCGAC AGCCAGAGTC 780
CCAACTCAAG GCAGTAAAGG TGTCTCCATC TAAAATGGAG AACGACAGTG GGGAGGAGGA 840
AGAAGAAGAA GAGGATGAAC AAGGAGCAAC TCTCTGTGGA GCTTGTGGTG ATAATTATGC 900
GACTGATGAA TTCTGGATTT GCTGTGATAT TTGCGAGAGA TGGTTCCATG GAAAATGTGT 960
GAAGATCACT CCAGCTAAAG CTGAGCATAT CAAGCAGTAC AAGTGTCCTA GTTGCAGTAG 1020
CAAGAGAGCT AAAGTCTAGA ATTTGTGGCA AGAACAATTA AGTGGTGATG TTGGAAGGTG 1080
TAGGAGTTTT AGCTCAATTA TCAAATGTCA AAAGTTAAAT GTTTGCTGAT GGAATTGGGA 1140
TGTCCATTTC ATGAACATTT GCTTTCTGTT ATCTTGCTTT CGGATTGTGT TTTAGATTAA 1200
AAGAAATTGT GCCTGTTATC ATCTTGTGTT TGAAGATCCA TTTTCACTTT TTACTTTTGT 1260
ATTTATTATG AGGAATTCCC AA 1283
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 98 6e-118 420
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 80 3e-97 351
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 84 4e-97 351
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 79 1e-95 346
WERAM-Prp-0081 EMJ24886 Prunus persica 81 2e-94 342
WERAM-Met-0117 KEH32736 Medicago truncatula 78 5e-93 337
WERAM-Thc-0075 EOY26404 Theobroma cacao 79 2e-92 335
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 77 2e-91 332
WERAM-Arl-0043 fgenesh2_kg.1__ 1579__ AT1G14510.1 Arabidopsis lyrata 77 3e-91 331
WERAM-Amt-0088 ERM99796 Amborella trichopoda 76 2e-89 325
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 74 4e-89 325
WERAM-Brr-0124 Bra024817.1-P Brassica rapa 76 1e-86 316
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 72 5e-86 314
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 74 6e-85 310
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 73 1e-84 309
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 73 1e-84 309
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 73 1e-84 309
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 73 1e-84 309
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 73 1e-84 309
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 73 1e-84 309
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 73 1e-84 309
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 73 1e-84 309
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 74 4e-84 308
WERAM-Sob-0072 Sb04g023220.1 Sorghum bicolor 71 7e-84 307
WERAM-Zem-0065 GRMZM2G107807_P01 Zea mays 71 8e-84 307
WERAM-Brd-0086 BRADI3G46110.1 Brachypodium distachyon 71 1e-83 306
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 71 1e-82 303
WERAM-Sei-0086 Si023009m Setaria italica 70 9e-82 300
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 67 1e-79 293
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 1e-78 290
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 73 9e-78 286
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 66 4e-77 285
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 67 5e-76 281
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 66 9e-73 270
Created Date 25-Jun-2016