WERAM Information

Tag Content
WERAM ID WERAM-Orr-0067
Ensembl Protein ID ORUFI06G20650.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ORUFI06G20650 ORUFI06G20650.1 ORUFI06G20650.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 3.40e-08 34.6 38 117
Organism Oryza rufipogon
Domain Profile
  HDAC Class-I
      class-1.txt  45 ivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainw 127
                      ++ ++ a+  +l   +s++y+  l  v pe     + +l +fnv+edcP+f+g++ ycq+ +G   +a     ++ ++++in 
  ORUFI06G20650.1  38 LMDTNAARDCDLRLLRSDDYVASLPAVLPEL---WICSLCRFNVDEDCPIFHGFYIYCQTCAGDCARAIIDRYHGAQNVVINK 117
                      56677888889999999*******9999976...566899***************************9999999999999995 PP
Protein Sequence
(Fasta)		MVLQDGSTNT KHVKTDLIGC IGDGCSHADV FLPSCVVLMD TNAARDCDLR LLRSDDYVAS 60
LPAVLPELWI CSLCRFNVDE DCPIFHGFYI YCQTCAGDCA RAIIDRYHGA QNVVINKALD 120
GNMADK 126
Nucleotide Sequence
(Fasta)		ATGGTGTTGC AAGATGGATC TACAAACACG AAGCATGTCA AAACCGATCT AATCGGATGC 60
ATAGGAGACG GCTGCAGCCA CGCCGATGTC TTCCTGCCGT CCTGCGTCGT GCTGATGGAC 120
ACCAACGCCG CCCGCGACTG CGACCTCCGC CTCCTCCGCT CCGACGACTA CGTCGCCTCC 180
CTCCCCGCCG TCCTCCCGGA GTTGTGGATC TGTTCCCTCT GCCGCTTCAA CGTCGACGAG 240
GATTGCCCGA TTTTCCATGG CTTCTACATC TACTGCCAGA CCTGCGCAGG GGACTGTGCC 300
CGCGCCATCA TCGATCGCTA CCATGGCGCA CAAAACGTCG TCATCAACAA GGCTTTGGAT 360
GGCAACATGG CCGACAAATG A 382
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orp-0041 OPUNC04G06470.1 Oryza punctata 52 3e-14 73.9
WERAM-Orb-0021 OBART02G08720.1 Oryza barthii 52 6e-11 62.8
WERAM-Ori-0023 BGIOSGA007785-PA Oryza indica 52 7e-11 62.8
WERAM-Orgl-0022 OGLUM02G08770.1 Oryza glumaepatula 52 7e-11 62.8
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 52 7e-11 62.8
WERAM-Ors-0019 OS02T0215200-01 Oryza sativa 52 8e-11 62.8
WERAM-Orm-0023 OMERI02G09860.1 Oryza meridionalis 51 2e-10 61.2
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 49 4e-10 60.5
WERAM-Orbr-0024 OB02G17760.1 Oryza brachyantha 46 3e-09 57.4
WERAM-Glm-0119 GLYMA11G00220.3 Glycine max 46 2e-08 54.7
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 43 3e-08 53.9
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 41 4e-08 53.5
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 43 4e-08 53.5
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 43 5e-08 53.5
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 43 5e-08 53.5
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 42 5e-08 53.1
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 42 5e-08 53.1
WERAM-Sei-0026 Si006243m Setaria italica 46 5e-08 53.1
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 43 6e-08 53.1
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 46 6e-08 53.1
WERAM-Met-0119 KEH27301 Medicago truncatula 44 7e-08 52.8
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 45 1e-07 52.4
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 45 1e-07 51.6
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 45 2e-07 51.6
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 45 2e-07 51.6
WERAM-Thc-0026 EOX98961 Theobroma cacao 42 2e-07 51.2
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 40 2e-07 51.2
WERAM-Prp-0056 EMJ02177 Prunus persica 42 2e-07 51.2
WERAM-Amt-0016 ERM94967 Amborella trichopoda 42 3e-07 50.8
WERAM-Aet-0051 EMT16627 Aegilops tauschii 44 3e-07 50.8
WERAM-Tru-0047 TRIUR3_21298-P1 Triticum urartu 43 6e-07 49.7
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 38 7e-07 49.7
Created Date 25-Jun-2016