Tag |
Content |
WERAM ID |
WERAM-Orni-0039 |
Ensembl Protein ID |
ONIVA04G09660.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
2.50e-162 |
541 |
6 |
317 |
|
Organism |
Oryza nivara |
Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf 95 ++ay+yd dvg++++g +hpmkp+rl++th+Lvl+y+l+kk+ei++p+ka +el++fhs +y+efl++++p++++ +++el+++n+gedcPvf ONIVA04G09660.1 6 RIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTELAQFHSADYVEFLHRITPDTQHLYENELRRYNLGEDCPVF 99 689******************************************************************************************* PP class-1.txt 96 dglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvs 189 d+lfe+cq+++G++l+aa++Ln+k++diainwaGGlhhakk+easGfcy+nD+vl+ilellk+h rvlyidid+hhGDgveeafy+tdrvmtvs ONIVA04G09660.1 100 DNLFEFCQIYAGGTLDAARRLNHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193 ********************************************************************************************** PP class-1.txt 190 fhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvks 283 fhkyg+ ffPgtGd++d+g+ +gkyya+n+PlkdgidD+ ++++fk+vi kv+e++ P a+vlqcGaDsla+Drlg+fnlsi+ghaecvkfvk+ ONIVA04G09660.1 194 FHKYGDFFFPGTGDIKDIGEREGKYYAINIPLKDGIDDSGFTRLFKTVIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKK 287 ********************************************************************************************** PP class-1.txt 284 fnlpllvlGGGGYtlrnvaRcwtyetavvl 313 fn+pllv GGGGYt++nvaRcw++et+v+l ONIVA04G09660.1 288 FNIPLLVTGGGGYTKENVARCWAVETGVLL 317 ****************************97 PP
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Protein Sequence (Fasta) | MLEKDRIAYF YDGDVGNVYF GPNHPMKPHR LCMTHHLVLS YDLHKKMEIY RPHKAYPTEL 60 AQFHSADYVE FLHRITPDTQ HLYENELRRY NLGEDCPVFD NLFEFCQIYA GGTLDAARRL 120 NHKTCDIAIN WAGGLHHAKK CEASGFCYIN DLVLGILELL KYHARVLYID IDVHHGDGVE 180 EAFYFTDRVM TVSFHKYGDF FFPGTGDIKD IGEREGKYYA INIPLKDGID DSGFTRLFKT 240 VIAKVVETYL PGAIVLQCGA DSLARDRLGC FNLSIEGHAE CVKFVKKFNI PLLVTGGGGY 300 TKENVARCWA VETGVLLDTE LPNEIPDNEY IKYFAPDYTL KVSNVNMDNL NSKSYLSSIK 360 VQVMESLRAI QHAPGVQMQE VPPDFYIPDI DEDELDPDER VDQHTQDKQI HRDDEYYEGD 420 NDNDHEDGAR Protein Fasta Sequence
>ONIVA04G09660.1|Class-I|Oryza nivara MLEKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTELAQFHSADYVEFLHRITPDTQHLYENELRRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRLNHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDFFFPGTGDIKDIGEREGKYYAINIPLKDGIDDSGFTRLFKTVIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVETGVLLDTELPNEIPDNEYIKYFAPDYTLKVSNVNMDNLNSKSYLSSIKVQVMESLRAIQHAPGVQMQEVPPDFYIPDIDEDELDPDERVDQHTQDKQIHRDDEYYEGDNDNDHEDGAR
|
Nucleotide Sequence (Fasta) | CTGGGGATCC ATGAGCAACG CCGTAGGACT CGAAGGTAGG GCGCGCGTCG TAGATGGAGC 60 CCATGTACGA TGACCCCCTC TTGGGATTCC TCTTCTCCTT CATGATCCCG CCCCATCTCC 120 TCCCCTGGCA ATGCATCCCC TCGTGGCCGG GGCCACGGTA CCACCCCTCG TTCTCCTCGT 180 TCTGGATGTA CTCCCCCCAG GTGGACGAGA ACGGGGTGCC GTCGGGCGGC GGCGGCAGCG 240 CCCCGACGAA GGCGGCGAAG GCGAGGTCGT GGTTGCCGCA GAGGAAGGCG TGGCGCTGCG 300 CGGGGTGGCG GGACGGGAGC GCGAGGAGGA AGTCGATGAC CTCGCGGGTG CTGGGCCCGC 360 GGTCGCAGTA GTCGCCGAGG AAGACGACGA GCGCGGTGGC GAAGGCGTCG GGCGGGAGCG 420 CGGACTGGAG GTTCGCCCAC AGGCTCTCCA GCTTGGAGAT GTAGCCGTGG ACGTCTCCCA 480 CGCAGATCAC CACGCGGGGA GGCGGCGGCG GAGGCGGAGG AGACATCTCG CCGCCGGCGT 540 CGTTTCCTGT TTCCCACAGG TTGCTGATAA CACACCACAG AAAGAGAGGA AAAGTAGAAT 600 TCCAATTTCC AAGTAGCCCA GGGAAACAAA CGCACCGTCC GATGATGGTG ACAACACGAT 660 CCTGACCGTC CATCCTGATG CCAACTCCCC TCTTCGGCTC CTTCAATCCT CTCCAGTGCG 720 GCCGGTGCCT TTCTACAGCG GCGTTCCACT CGGGTTGGTC TCTCCCCCGA GGCACGGCCG 780 CCGCCGCCGC CGCGCTCGGT CTAATCGGAA TCTATTTCTC GACGCGACTC CGCTTCCCCG 840 GCTCCCCTCT CACCCTTCCG CGGCGCCGCC GCCGCCGCTT GTAGCGGTTG GGGGGCGAGC 900 GGCCGCTCGA GAGCGAAGCG ATGCTGGAGA AAGACAGGAT AGCCTACTTC TACGATGGCG 960 ATGTGGGCAA TGTCTACTTT GGGCCAAATC ACCCGATGAA ACCACATCGA CTTTGTATGA 1020 CACATCATCT TGTGCTTTCA TATGATCTTC ACAAGAAGAT GGAGATATAT AGGCCCCACA 1080 AAGCATATCC AACAGAGCTC GCACAGTTCC ATTCTGCTGA TTATGTGGAA TTCTTGCATC 1140 GGATAACTCC TGACACCCAA CACCTGTATG AAAATGAATT ACGTAGATAC AATCTTGGAG 1200 AAGACTGCCC AGTCTTTGAT AATCTGTTTG AGTTTTGCCA AATATATGCT GGAGGAACTC 1260 TAGATGCGGC TCGCAGATTG AATCATAAAA CATGTGATAT TGCTATCAAT TGGGCTGGTG 1320 GATTGCATCA TGCAAAGAAG TGCGAGGCAT CAGGGTTCTG CTACATTAAT GATCTGGTTT 1380 TGGGAATTCT GGAGCTTCTC AAGTACCATG CCAGGGTTCT CTATATTGAT ATCGATGTTC 1440 ATCACGGGGA TGGAGTTGAA GAAGCCTTTT ATTTCACTGA CAGGGTAATG ACTGTAAGTT 1500 TCCACAAGTA TGGTGATTTT TTCTTCCCTG GCACAGGTGA TATTAAGGAT ATAGGAGAAA 1560 GAGAAGGAAA ATATTATGCC ATTAACATTC CACTTAAAGA TGGGATAGAT GACTCCGGCT 1620 TTACTCGCCT TTTTAAAACA GTTATTGCCA AAGTTGTTGA GACATATCTG CCAGGTGCTA 1680 TTGTTCTTCA ATGCGGGGCT GATTCCTTGG CACGGGACCG TCTGGGGTGC TTCAATCTGT 1740 CCATTGAAGG CCATGCTGAA TGTGTGAAGT TTGTCAAGAA ATTCAATATC CCTCTACTGG 1800 TGACTGGGGG TGGTGGATAC ACAAAAGAGA ATGTAGCACG CTGTTGGGCT GTTGAAACTG 1860 GTGTTCTTCT AGATACGGAG CTCCCAAATG AAATTCCAGA CAATGAATAC ATCAAATACT 1920 TTGCTCCAGA TTATACATTG AAAGTATCGA ATGTGAACAT GGACAACTTG AATAGCAAGT 1980 CATATCTAAG TTCAATCAAA GTGCAAGTCA TGGAGAGTTT GCGGGCCATA CAACATGCGC 2040 CTGGTGTTCA GATGCAAGAG GTTCCACCAG ATTTTTATAT CCCAGATATT GATGAAGATG 2100 AGCTGGATCC TGATGAACGT GTAGATCAGC ATACCCAAGA CAAGCAGATT CATCGCGATG 2160 ACGAGTACTA TGAAGGTGAC AACGACAATG ATCATGAGGA CGGGGCCCGT TGAAAAAGGT 2220 TCTTTGTATG ATGAAACTGG ATAGAGAAAG TCTGGTGCTG TTGCACGGTT TAACAGCGTT 2280 AGGTGGGAAA TACTGTCAAT TGACTTGTTA GGATCTAACA CCTTTGCCTG CATATAGTGC 2340 GTGTACGTTC CTACTTTTTA ATCAGTTACA TATGCTACTT GCATGCAGAG ATTGCAAATT 2400 CTTGGTCGGT GGTAATGATT CATAGTTTTT GGCTGCACAC ATTTTTCATA TCTTTTTTTG 2460 TTTAAACCCG GCGTATGTGG TTATCAGGTT GGACCTACTC TCAACGTCCT TAAAAAGAAA 2520 TAAACTTCTA TAATTTGGAT ATACTTTGTG TTAGCTTTTT CTTTAAGATA GAGGGAGTCA 2580 GCTGGTGCAC ACGTTTTCCT AAGAGTGTTT CGCACTGCTC TGTCAACTTG AGCCAGATCG 2640 TTCTCGCTAT CAAGTTGGGC CTGATCGGTA GGTTTTGGGC CAACCTGAGC TGAACGCAGA 2700 GGCGTTTCCG GACAGTAACG GCTGGCCCAC CTGTCACGTT CACTCACGCT ACGTGCGCTT 2760 CGAGCGTTCG ACGGTCACGG GGAGTCGGAG TCGCTGCCAA CCAAAGCGGG CGTCGTTGCG 2820 TTGCGTGGCG TGGCGTGGCG TGGAGGCAGG GGGAAGCATC GCGCGCGCGG CGTGG
2876Nucleotide Fasta Sequence
>ONIVA04G09660.1|Class-I|Oryza nivara CTGGGGATCCATGAGCAACGCCGTAGGACTCGAAGGTAGGGCGCGCGTCGTAGATGGAGCCCATGTACGATGACCCCCTCTTGGGATTCCTCTTCTCCTTCATGATCCCGCCCCATCTCCTCCCCTGGCAATGCATCCCCTCGTGGCCGGGGCCACGGTACCACCCCTCGTTCTCCTCGTTCTGGATGTACTCCCCCCAGGTGGACGAGAACGGGGTGCCGTCGGGCGGCGGCGGCAGCGCCCCGACGAAGGCGGCGAAGGCGAGGTCGTGGTTGCCGCAGAGGAAGGCGTGGCGCTGCGCGGGGTGGCGGGACGGGAGCGCGAGGAGGAAGTCGATGACCTCGCGGGTGCTGGGCCCGCGGTCGCAGTAGTCGCCGAGGAAGACGACGAGCGCGGTGGCGAAGGCGTCGGGCGGGAGCGCGGACTGGAGGTTCGCCCACAGGCTCTCCAGCTTGGAGATGTAGCCGTGGACGTCTCCCACGCAGATCACCACGCGGGGAGGCGGCGGCGGAGGCGGAGGAGACATCTCGCCGCCGGCGTCGTTTCCTGTTTCCCACAGGTTGCTGATAACACACCACAGAAAGAGAGGAAAAGTAGAATTCCAATTTCCAAGTAGCCCAGGGAAACAAACGCACCGTCCGATGATGGTGACAACACGATCCTGACCGTCCATCCTGATGCCAACTCCCCTCTTCGGCTCCTTCAATCCTCTCCAGTGCGGCCGGTGCCTTTCTACAGCGGCGTTCCACTCGGGTTGGTCTCTCCCCCGAGGCACGGCCGCCGCCGCCGCCGCGCTCGGTCTAATCGGAATCTATTTCTCGACGCGACTCCGCTTCCCCGGCTCCCCTCTCACCCTTCCGCGGCGCCGCCGCCGCCGCTTGTAGCGGTTGGGGGGCGAGCGGCCGCTCGAGAGCGAAGCGATGCTGGAGAAAGACAGGATAGCCTACTTCTACGATGGCGATGTGGGCAATGTCTACTTTGGGCCAAATCACCCGATGAAACCACATCGACTTTGTATGACACATCATCTTGTGCTTTCATATGATCTTCACAAGAAGATGGAGATATATAGGCCCCACAAAGCATATCCAACAGAGCTCGCACAGTTCCATTCTGCTGATTATGTGGAATTCTTGCATCGGATAACTCCTGACACCCAACACCTGTATGAAAATGAATTACGTAGATACAATCTTGGAGAAGACTGCCCAGTCTTTGATAATCTGTTTGAGTTTTGCCAAATATATGCTGGAGGAACTCTAGATGCGGCTCGCAGATTGAATCATAAAACATGTGATATTGCTATCAATTGGGCTGGTGGATTGCATCATGCAAAGAAGTGCGAGGCATCAGGGTTCTGCTACATTAATGATCTGGTTTTGGGAATTCTGGAGCTTCTCAAGTACCATGCCAGGGTTCTCTATATTGATATCGATGTTCATCACGGGGATGGAGTTGAAGAAGCCTTTTATTTCACTGACAGGGTAATGACTGTAAGTTTCCACAAGTATGGTGATTTTTTCTTCCCTGGCACAGGTGATATTAAGGATATAGGAGAAAGAGAAGGAAAATATTATGCCATTAACATTCCACTTAAAGATGGGATAGATGACTCCGGCTTTACTCGCCTTTTTAAAACAGTTATTGCCAAAGTTGTTGAGACATATCTGCCAGGTGCTATTGTTCTTCAATGCGGGGCTGATTCCTTGGCACGGGACCGTCTGGGGTGCTTCAATCTGTCCATTGAAGGCCATGCTGAATGTGTGAAGTTTGTCAAGAAATTCAATATCCCTCTACTGGTGACTGGGGGTGGTGGATACACAAAAGAGAATGTAGCACGCTGTTGGGCTGTTGAAACTGGTGTTCTTCTAGATACGGAGCTCCCAAATGAAATTCCAGACAATGAATACATCAAATACTTTGCTCCAGATTATACATTGAAAGTATCGAATGTGAACATGGACAACTTGAATAGCAAGTCATATCTAAGTTCAATCAAAGTGCAAGTCATGGAGAGTTTGCGGGCCATACAACATGCGCCTGGTGTTCAGATGCAAGAGGTTCCACCAGATTTTTATATCCCAGATATTGATGAAGATGAGCTGGATCCTGATGAACGTGTAGATCAGCATACCCAAGACAAGCAGATTCATCGCGATGACGAGTACTATGAAGGTGACAACGACAATGATCATGAGGACGGGGCCCGTTGAAAAAGGTTCTTTGTATGATGAAACTGGATAGAGAAAGTCTGGTGCTGTTGCACGGTTTAACAGCGTTAGGTGGGAAATACTGTCAATTGACTTGTTAGGATCTAACACCTTTGCCTGCATATAGTGCGTGTACGTTCCTACTTTTTAATCAGTTACATATGCTACTTGCATGCAGAGATTGCAAATTCTTGGTCGGTGGTAATGATTCATAGTTTTTGGCTGCACACATTTTTCATATCTTTTTTTGTTTAAACCCGGCGTATGTGGTTATCAGGTTGGACCTACTCTCAACGTCCTTAAAAAGAAATAAACTTCTATAATTTGGATATACTTTGTGTTAGCTTTTTCTTTAAGATAGAGGGAGTCAGCTGGTGCACACGTTTTCCTAAGAGTGTTTCGCACTGCTCTGTCAACTTGAGCCAGATCGTTCTCGCTATCAAGTTGGGCCTGATCGGTAGGTTTTGGGCCAACCTGAGCTGAACGCAGAGGCGTTTCCGGACAGTAACGGCTGGCCCACCTGTCACGTTCACTCACGCTACGTGCGCTTCGAGCGTTCGACGGTCACGGGGAGTCGGAGTCGCTGCCAACCAAAGCGGGCGTCGTTGCGTTGCGTGGCGTGGCGTGGCGTGGAGGCAGGGGGAAGCATCGCGCGCGCGGCGTGG
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |