WERAM Information

Tag Content
WERAM ID WERAM-Zem-0026
Ensembl Protein ID GRMZM2G038066_P01
Gene Name LOC100382843
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G038066 GRMZM2G038066_T01 GRMZM2G038066_P01
GRMZM2G038066 GRMZM2G038066_T02 GRMZM2G038066_P02
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.60e-13 49.7 197 246
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                        t+C +C++++  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC+
  GRMZM2G038066_P01 197 TLCGACKESYGPDEFWICCDLCEKWFHGKCVKITAAKAEHIKQYKCPSCT 246
                        78****888888999*******************666664479******7 PP
Protein Sequence
(Fasta)		MDSGYNPRTV EEVFRDFKGR RAGIIRALTT DAEDFFKQCD PEKENLCLYG FPNESWEVNL 60
PAEEVPPDLP EPALGINFAR DGMQEKEWLS MVAAHSDAWL LSVAFYFGAR FGFNKNDRKR 120
LYSLIDDLPM AFEIVSGKSE TKAPAPPSSS NHSNIKPKSN NKKKPPEPKV KQPKPRAPAE 180
EGEEEDGSAS EGEHGETLCG ACKESYGPDE FWICCDLCEK WFHGKCVKIT AAKAEHIKQY 240
KCPSCTGGGG VSNSGTKRAR PS 262
Nucleotide Sequence
(Fasta)		GCCTGCCTTC TCTCTCCTCA CTTAAACCCT CCTCCGCTCG ACGACACCAC ACGAAAATAT 60
ACGTCAGAAT AAACCGCAGC AAATCTTCTC CGGCACCGGC AGCGCCCAAA TCCGGCAATC 120
CGCTGCTCCG AATGGACTCA GGTTACAATC CCCGGACGGT GGAGGAGGTG TTCCGGGACT 180
TCAAGGGCCG TCGTGCCGGG ATAATCCGCG CGCTCACCAC TGATGCGGAG GATTTCTTCA 240
AGCAATGCGA CCCGGAAAAA GAAAACTTGT GCCTGTATGG GTTTCCTAAT GAGAGCTGGG 300
AAGTAAATTT GCCTGCTGAA GAGGTGCCAC CTGACCTCCC AGAACCAGCA TTAGGCATAA 360
ACTTTGCAAG AGATGGAATG CAGGAAAAAG AGTGGTTGTC CATGGTTGCT GCACACAGTG 420
ATGCATGGTT ACTTTCTGTT GCATTTTACT TCGGTGCTCG ATTCGGTTTC AATAAAAATG 480
ACAGGAAGCG CCTCTACAGT TTGATTGATG ATCTTCCCAT GGCTTTTGAA ATTGTTAGTG 540
GGAAGAGTGA AACCAAGGCA CCAGCACCAC CAAGCAGTAG TAACCACAGC AATATCAAAC 600
CGAAGTCTAA CAACAAAAAG AAACCACCGG AGCCTAAGGT GAAGCAGCCA AAGCCGCGTG 660
CCCCTGCAGA GGAAGGCGAG GAGGAAGATG GCAGTGCAAG CGAGGGCGAG CACGGGGAGA 720
CGCTGTGCGG CGCGTGCAAG GAAAGCTACG GCCCCGACGA GTTTTGGATC TGCTGCGACC 780
TCTGCGAGAA GTGGTTCCAC GGCAAGTGCG TCAAGATCAC GGCGGCCAAG GCCGAGCACA 840
TCAAGCAGTA CAAGTGCCCG TCCTGCACCG GCGGCGGTGG CGTCAGCAAC AGCGGCACCA 900
AGCGAGCCCG CCCATCATAG CTGCGACTTT TAGTGATGTA AACTGCTTAG AAAAACTGTT 960
GCGGACATAG CGCCCATCAT AGCTGCGACT TTTTAAATGG TGGTGTAAAC TTTTGTAGTG 1020
CGACTAGGCC GTTTGTCACC CTATCATACT TGGCTTCAAG TAGGTTTTCT GTTTTTCAGT 1080
TTTCATTATC ATACTCGCTT GAAGTAGTGT GAATGAATGG CGTAAAATAT C 1132
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 68 2e-84 309
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 61 9e-83 303
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 67 7e-82 300
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 67 9e-82 300
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 67 1e-80 296
WERAM-Amt-0032 ERN11177 Amborella trichopoda 67 2e-80 296
WERAM-Met-0172 KEH18446 Medicago truncatula 65 4e-80 295
WERAM-Viv-0061 VIT_09s0002g01600.t01 Vitis vinifera 66 6e-80 294
WERAM-Prp-0082 EMJ27202 Prunus persica 67 6e-80 294
WERAM-Thc-0077 EOY27191 Theobroma cacao 66 1e-79 293
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 57 9e-79 290
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 64 1e-78 290
WERAM-Bro-0146 Bo8g066080.1 Brassica oleracea 57 1e-77 286
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 64 1e-77 286
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 59 5e-77 285
WERAM-Orp-0045 OPUNC04G11800.1 Oryza punctata 58 7e-76 280
WERAM-Orm-0047 OMERI04G12540.2 Oryza meridionalis 57 1e-75 280
WERAM-Orbr-0055 OB04G21120.1 Oryza brachyantha 56 1e-75 280
WERAM-Ors-0042 OS04T0444900-01 Oryza sativa 57 1e-75 280
WERAM-Orgl-0044 OGLUM04G13710.1 Oryza glumaepatula 57 1e-75 280
WERAM-Orb-0044 OBART04G13930.1 Oryza barthii 57 1e-75 280
WERAM-Orni-0040 ONIVA04G12140.1 Oryza nivara 57 1e-75 280
WERAM-Orr-0044 ORUFI04G15210.1 Oryza rufipogon 57 1e-75 280
WERAM-Ori-0053 BGIOSGA016480-PA Oryza indica 57 8e-75 277
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 64 1e-74 276
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 61 1e-73 273
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 59 2e-73 272
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 60 2e-72 269
WERAM-Sei-0039 Si010912m Setaria italica 56 1e-71 266
WERAM-Hov-0089 MLOC_68143.1 Hordeum vulgare 59 7e-71 264
WERAM-Aet-0093 EMT29143 Aegilops tauschii 59 9e-71 263
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 59 9e-71 263
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 57 2e-65 246
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 58 4e-64 241
Created Date 25-Jun-2016