Tag |
Content |
WERAM ID |
WERAM-Sah-0048 |
Ensembl Protein ID |
ENSSHAP00000005466.1 |
Gene Name |
HDAC11 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-IV |
4.80e-157 |
521.9 |
30 |
317 |
HDAC |
Class-I |
2.80e-25 |
89.7 |
27 |
308 |
|
Organism |
Sarcophilus harrisii |
Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89 leklhpfda+kw+kv++flkee++l+d ++vearea++edl+vvht++yl++lk+s++vatiteip+v++lpnflvqr+vlrplr+q+g ENSSHAP00000005466.1 30 LEKLHPFDAGKWGKVVHFLKEENFLTDVMIVEAREATEEDLRVVHTQRYLNKLKWSFVVATITEIPPVICLPNFLVQRHVLRPLRTQTG 118 79*************************************************************************************** PP class-4.txt 90 GtilaaklaverGwain.vGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynre 177 Gti+a+kla+erGwain vGGGfhhcss+rGGGfcayadi+l ikflfer++++s+++iidldahqGnGherdf+dd+rvyi+d+ynr+ ENSSHAP00000005466.1 119 GTIMAGKLAIERGWAINiVGGGFHHCSSDRGGGFCAYADISLSIKFLFERVEGVSKATIIDLDAHQGNGHERDFMDDSRVYIMDIYNRN 207 *****************559********************************************************************* PP class-4.txt 178 iypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipi 266 iyp+d +ak+ai+rk+ele+gt d eyl+k+ ++++++l+e++pd+v+ynaGtdvleGd+lG+l++s+ givkrde+vf+ +r+++ipi ENSSHAP00000005466.1 208 IYPGDSFAKRAIKRKIELEWGTGDREYLQKVTQHVEEALKEHKPDVVIYNAGTDVLEGDPLGGLSVSARGIVKRDELVFQAARKHNIPI 296 ***************************************************************************************** PP class-4.txt 267 vmvtsGGyqkrsarviadsil 287 +mvtsGGyqk+sar+iadsil ENSSHAP00000005466.1 297 LMVTSGGYQKESARIIADSIL 317 *******************95 PP
HDAC Class-I
class-1.txt 13 eyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkve.penaeelskelkkfnvgedcPvfdglfe 100 + ++ hp ++ + +++ + + ++ iv++++a+ e+l +h++ y++ lk + + + +e++ + n v ++ ENSSHAP00000005466.1 27 FMGLEKLHPFDAGKWGKVVHFLKEENFLTDVMIVEAREATEEDLRVVHTQRYLNKLKWSFvVATITEIPPVICLPNF----LVQRHVLR 111 55567789999999999999999999****************************99865415555666654443333....44455666 PP class-1.txt 101 ycqlitGasleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdrv 185 ++ tG+++ a k +++ ain GG+hh ++ Gfc Di l+i l ++ + id+d h G+g e f +rv ENSSHAP00000005466.1 112 PLRTQTGGTIMAGKLAIER--GWAINIvGGGFHHCSSDRGGGFCAYADISLSIKFLFErveGVSKATIIDLDAHQGNGHERDFMDDSRV 198 66899*****987766555..4566651678**********************999872224567899********************* PP class-1.txt 186 mtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgh 274 + + y+ + +Pg + +a k + l+ g D++y + +++ +++ ++ ++P++v+ + G+D l gD+lg ++s +g+ ENSSHAP00000005466.1 199 YIMDI--YNRNIYPGDS-FAK-RAIKR-----KIELEWGTGDREYLQKVTQHVEEALKEHKPDVVIYNAGTDVLEGDPLGGLSVSARGI 278 98776..78888**854.333.33333.....489**********9999999************************************9 PP class-1.txt 275 ae....cvkfvksfnlpllvlGGGGYtlrn 300 + + + +++n+p+l++ GGY+++ ENSSHAP00000005466.1 279 VKrdelVFQAARKHNIPILMVTSGGYQKES 308 875555678889**************8764 PP
|
Protein Sequence (Fasta) | PHDTKLYQEV SKTCWPIIYS PRYNITFMGL EKLHPFDAGK WGKVVHFLKE ENFLTDVMIV 60 EAREATEEDL RVVHTQRYLN KLKWSFVVAT ITEIPPVICL PNFLVQRHVL RPLRTQTGGT 120 IMAGKLAIER GWAINIVGGG FHHCSSDRGG GFCAYADISL SIKFLFERVE GVSKATIIDL 180 DAHQGNGHER DFMDDSRVYI MDIYNRNIYP GDSFAKRAIK RKIELEWGTG DREYLQKVTQ 240 HVEEALKEHK PDVVIYNAGT DVLEGDPLGG LSVSARGIVK RDELVFQAAR KHNIPILMVT 300 SGGYQKESAR IIADSILNLF NLGLI 325Protein Fasta Sequence
>ENSSHAP00000005466.1|Class-I|Sarcophilus harrisii PHDTKLYQEVSKTCWPIIYSPRYNITFMGLEKLHPFDAGKWGKVVHFLKEENFLTDVMIVEAREATEEDLRVVHTQRYLNKLKWSFVVATITEIPPVICLPNFLVQRHVLRPLRTQTGGTIMAGKLAIERGWAINIVGGGFHHCSSDRGGGFCAYADISLSIKFLFERVEGVSKATIIDLDAHQGNGHERDFMDDSRVYIMDIYNRNIYPGDSFAKRAIKRKIELEWGTGDREYLQKVTQHVEEALKEHKPDVVIYNAGTDVLEGDPLGGLSVSARGIVKRDELVFQAARKHNIPILMVTSGGYQKESARIIADSILNLFNLGLI
|
Nucleotide Sequence (Fasta) | CCCCACCGGC CTCTGCTTGG CCCAGTGCAA AGTCCGGGCG GTGACTGCAG GTGGCGGGTC 60 TGCCGCAGGC CCGGCGGGGG GATGCCTCAC GACACCAAGC TATACCAAGA GGTGTCAAAG 120 ACCTGCTGGC CCATTATCTA CTCACCAAGA TATAACATCA CATTCATGGG TTTGGAGAAG 180 CTTCATCCTT TTGATGCTGG GAAATGGGGG AAAGTCGTCC ATTTTTTGAA AGAAGAAAAT 240 TTCCTTACTG ATGTCATGAT CGTGGAAGCT AGAGAAGCTA CTGAGGAAGA CCTGCGGGTG 300 GTACACACAC AAAGATACTT GAATAAGCTG AAGTGGTCCT TTGTAGTGGC AACCATCACG 360 GAGATTCCAC CCGTCATCTG TCTTCCTAAT TTCCTGGTGC AGAGACATGT TCTTAGGCCA 420 CTAAGGACCC AGACAGGAGG AACCATTATG GCTGGGAAAC TGGCTATTGA ACGAGGCTGG 480 GCCATCAATA TAGTAGGTGG TGGGTTCCAT CACTGCTCCA GTGACAGGGG AGGGGGATTT 540 TGTGCCTATG CTGATATTTC ACTCTCTATC AAGTTTCTAT TTGAACGAGT GGAAGGAGTC 600 TCAAAAGCCA CCATTATTGA CCTGGATGCA CACCAGGGGA ATGGCCATGA GAGGGATTTC 660 ATGGACGACA GTCGGGTGTA CATCATGGAT ATCTATAATC GCAACATTTA TCCAGGAGAT 720 AGTTTTGCTA AACGTGCCAT CAAACGGAAG ATTGAGCTGG AGTGGGGAAC AGGAGACAGA 780 GAGTACCTGC AGAAAGTGAC TCAACACGTG GAAGAGGCGC TAAAAGAGCA CAAGCCTGAT 840 GTGGTGATCT ACAATGCGGG CACAGACGTC CTGGAGGGTG ACCCTCTGGG AGGACTCTCG 900 GTTTCTGCCA GGGGCATCGT GAAGAGGGAT GAACTGGTGT TCCAGGCTGC CCGAAAGCAT 960 AATATCCCTA TCCTCATGGT GACCTCAGGA GGCTACCAGA AAGAGTCAGC ACGGATCATA 1020 GCTGACTCCA TCCTCAACCT GTTCAACTTG GGCCTCATTG ACCATACTGA TGCAGACTGA 1080
1081Nucleotide Fasta Sequence
>ENSSHAP00000005466.1|Class-I|Sarcophilus harrisii CCCCACCGGCCTCTGCTTGGCCCAGTGCAAAGTCCGGGCGGTGACTGCAGGTGGCGGGTCTGCCGCAGGCCCGGCGGGGGGATGCCTCACGACACCAAGCTATACCAAGAGGTGTCAAAGACCTGCTGGCCCATTATCTACTCACCAAGATATAACATCACATTCATGGGTTTGGAGAAGCTTCATCCTTTTGATGCTGGGAAATGGGGGAAAGTCGTCCATTTTTTGAAAGAAGAAAATTTCCTTACTGATGTCATGATCGTGGAAGCTAGAGAAGCTACTGAGGAAGACCTGCGGGTGGTACACACACAAAGATACTTGAATAAGCTGAAGTGGTCCTTTGTAGTGGCAACCATCACGGAGATTCCACCCGTCATCTGTCTTCCTAATTTCCTGGTGCAGAGACATGTTCTTAGGCCACTAAGGACCCAGACAGGAGGAACCATTATGGCTGGGAAACTGGCTATTGAACGAGGCTGGGCCATCAATATAGTAGGTGGTGGGTTCCATCACTGCTCCAGTGACAGGGGAGGGGGATTTTGTGCCTATGCTGATATTTCACTCTCTATCAAGTTTCTATTTGAACGAGTGGAAGGAGTCTCAAAAGCCACCATTATTGACCTGGATGCACACCAGGGGAATGGCCATGAGAGGGATTTCATGGACGACAGTCGGGTGTACATCATGGATATCTATAATCGCAACATTTATCCAGGAGATAGTTTTGCTAAACGTGCCATCAAACGGAAGATTGAGCTGGAGTGGGGAACAGGAGACAGAGAGTACCTGCAGAAAGTGACTCAACACGTGGAAGAGGCGCTAAAAGAGCACAAGCCTGATGTGGTGATCTACAATGCGGGCACAGACGTCCTGGAGGGTGACCCTCTGGGAGGACTCTCGGTTTCTGCCAGGGGCATCGTGAAGAGGGATGAACTGGTGTTCCAGGCTGCCCGAAAGCATAATATCCCTATCCTCATGGTGACCTCAGGAGGCTACCAGAAAGAGTCAGCACGGATCATAGCTGACTCCATCCTCAACCTGTTCAACTTGGGCCTCATTGACCATACTGATGCAGACTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |