WERAM Information

Tag Content
WERAM ID WERAM-Orla-0184
Ensembl Protein ID ENSORLP00000021264.2
Gene Name hdac5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000016994.2 ENSORLT00000021265.2 ENSORLP00000021264.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 2.60e-112 375.5 47 928
HDAC Class-I 1.20e-26 94.3 744 897
Organism Oryzias latipes
Domain Profile
  HDAC Class-II
           class-2.txt 49 lkarkatkeelqlvHseehvelletaeklekeel 82
                          +++ ++++e l+  H+ ++ e+l+++++l   + 
  ENSORLP00000021264.2 47 FAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKR 80
                          3333333333333333333333333332222222 PP
           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles 84 
                           +glvyd+ mlkhq++++n + hpE+++R+q+i+srlqe+gll+++e++++rka+++e+q+vHse h+ l++t+ +l++++l++
  ENSORLP00000021264.2 607 TGLVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQSVHSEFHTLLYGTS-PLNRHKLDH 688
                           79**********************************************************************9.9***99997 PP
           class-2.txt 139 tamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvaw 227
                           +  GFC+fn+va+aakllqqkl v kilivDwD+HhGnGtq++fy+dp+vly+SlHRyd+g+ffp  gsga++evg+g+g+gfnvN+aw
  ENSORLP00000021264.2 742 SDRGFCFFNSVAIAAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYTDPSVLYISLHRYDDGNFFP--GSGAPEEVGSGAGVGFNVNIAW 828
                           568**************************************************************..********************** PP
           class-2.txt 228 nggl...mgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiae 311
                           +gg+   mgd eyl+afr vv+pia++F+Pd+vlvsaGfDa+eg  +plgg++v+akc+++lt+ l++laggrvv++lEGG++l+ai++
  ENSORLP00000021264.2 829 TGGVeppMGDVEYLVAFRSVVMPIAQRFSPDVVLVSAGFDAVEGhqSPLGGYNVSAKCFGQLTQLLMGLAGGRVVMALEGGHDLTAICD 917
                           ********************************************999****************************************** PP
           class-2.txt 312 aveavvkaLlg 322
                           a+ea+v+aLlg
  ENSORLP00000021264.2 918 ASEACVSALLG 928
                           *********96 PP
  HDAC Class-I
           class-1.txt 140 sGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgi 225
                            Gfc+ n + +a   l++k+   ++l +d d+hhG+g ++afyt   v+ +s+h+y++ +ffPg+G  ++vg + g  + vn+  + g+
  ENSORLP00000021264.2 744 RGFCFFNSVAIAAKLLQQKLgvGKILIVDWDIHHGNGTQQAFYTDPSVLYISLHRYDDgNFFPGSGAPEEVGSGAGVGFNVNIAWTGGV 832
                           6***********99998865227*********************************9746***********************999997 PP
           class-1.txt 226 d....DesyekifksviskvieafePeavvlqcGaDslag..Drlgefnlsikghaecvkfvksf 284
                           +    D +y   f+sv+ ++ ++f+P++v++  G D++ g   +lg +n+s k +++  +++   
  ENSORLP00000021264.2 833 EppmgDVEYLVAFRSVVMPIAQRFSPDVVLVSAGFDAVEGhqSPLGGYNVSAKCFGQLTQLLMGL 897
                           555559********************************872257************998877655 PP
Protein Sequence
(Fasta)		PVDLRNEPRV GSLSGGVAVD TTLREQQLQQ ELVLLKQQQE LQKQLLFAEF QKKHEVLTRQ 60
HEVQLQEHLK QQQELLAAKR QQELEQKRKL EQQRHEEQEK QRLEQQLLLL RNKEKGRESA 120
IASTEVKLKL QEFLLSKKEP GPSGLNHSFS PKCWAAQHPS LDQGSPPQGS TPGTPPSYKL 180
PSLLGSYEGK DDFPLRKTVS EPNLKVRSRL KQKVAERRSS PLLRRKDGTV ISTFKKRAIE 240
ISVSSMCSSA PGSGPSSPNS SNTAISNGST GSVPNIQTEL RSLHQMLGAD GTLSLYTSPS 300
LPNISLGLPA NTHIPPTQKL SAQQEAERQA IQSLRGGGAL TGKFLSTSSL PAETLIQLPF 360
SGGGHEVEAP PPTSHSTHSS LLQHVLLLEQ ARQQSAMLVP VYNQSPLVTA ERGVASGLRS 420
VNKLPRHRPL ARTQSAPLPQ SPQALQQLVV QQQHQHFLEK HYKVRTQTHT MLSKGADLPR 480
PPPTHPEETE EELTESSDMQ EDEGEASVSR EGSHDRKHAS EQLFVHVKGE EEHSSGQVRD 540
ESTESELEEE EEDDERLKGS HTRKRSADAT PLQPLGVFQS SLAHKYLGRS KSSPTASINP 600
VKHLFTTGLV YDSLMLKHQC VCGNAHIHPE HAGRVQSIWS RLQETGLLGR CERIRGRKAS 660
LDEIQSVHSE FHTLLYGTSP LNRHKLDHKK LLGPISQKMY AVLPWEASGS PQPCPSLFGL 720
SRATLWAFGS VPGLILSRML SSDRGFCFFN SVAIAAKLLQ QKLGVGKILI VDWDIHHGNG 780
TQQAFYTDPS VLYISLHRYD DGNFFPGSGA PEEVGSGAGV GFNVNIAWTG GVEPPMGDVE 840
YLVAFRSVVM PIAQRFSPDV VLVSAGFDAV EGHQSPLGGY NVSAKCFGQL TQLLMGLAGG 900
RVVMALEGGH DLTAICDASE ACVSALLGDL WPLDNPCPKA CASLERVIEI QSKHWSCLQP 960
LSQTSGRSQP DGGQGTQSEK DEAETVSAMA SLSVDVEQPV SVPESTDSSR STEEPMEEEP 1020
IL 1022
Nucleotide Sequence
(Fasta)		CCAGTAGACC TAAGGAACGA GCCTAGGGTG GGGTCTCTGT CTGGGGGAGT GGCAGTGGAC 60
ACAACCCTAC GAGAGCAGCA GCTTCAGCAG GAGCTGGTGC TCCTCAAACA GCAGCAGGAG 120
CTGCAGAAAC AGTTGCTGTT CGCTGAGTTT CAGAAGAAGC ACGAGGTTCT GACGCGGCAG 180
CACGAGGTCC AGCTGCAGGA GCACCTGAAG CAACAACAGG AGCTGCTGGC GGCCAAGCGC 240
CAACAGGAGC TGGAGCAGAA ACGGAAGCTG GAGCAGCAGA GGCATGAGGA GCAGGAGAAG 300
CAGAGGCTGG AGCAGCAGCT GCTGCTGCTC AGGAACAAGG AGAAAGGCAG AGAGAGTGCC 360
ATCGCCAGCA CGGAGGTGAA GCTGAAGCTG CAGGAGTTCC TACTCAGTAA GAAGGAGCCT 420
GGACCCAGCG GACTGAACCA TTCCTTCTCC CCAAAGTGCT GGGCTGCTCA GCACCCCTCC 480
CTGGACCAGG GCTCTCCTCC TCAGGGTAGC ACTCCTGGCA CTCCCCCCTC CTACAAACTA 540
CCCTCGCTGT TGGGAAGCTA CGAAGGCAAA GATGACTTCC CTCTACGCAA GACAGTCTCA 600
GAACCCAACC TGAAGGTGCG GTCCCGACTG AAGCAGAAGG TGGCTGAGAG GCGCAGCTCC 660
CCCCTTCTGC GTAGAAAGGA CGGCACTGTC ATCAGCACCT TCAAGAAAAG GGCCATCGAG 720
ATTTCAGTCT CCTCCATGTG CAGCAGCGCT CCGGGTTCAG GTCCCAGCAG TCCCAACAGC 780
TCCAACACGG CCATATCAAA CGGCAGCACG GGGTCGGTCC CCAACATCCA GACTGAGCTC 840
CGGTCGCTTC ATCAGATGCT GGGTGCCGAC GGGACGCTGA GCCTGTACAC GTCTCCCTCT 900
CTGCCCAACA TCTCCCTGGG TCTGCCCGCC AACACGCACA TCCCGCCTAC ACAGAAGCTG 960
TCTGCCCAGC AGGAGGCCGA GCGCCAAGCC ATCCAATCTC TGCGAGGGGG CGGAGCTTTG 1020
ACAGGGAAGT TTCTGTCGAC GTCCTCCCTG CCTGCAGAGA CGCTCATTCA ACTTCCTTTT 1080
TCAGGCGGTG GCCATGAGGT TGAGGCTCCT CCTCCCACCT CTCACTCCAC CCACTCTTCG 1140
CTTCTGCAAC ACGTGTTGCT GTTGGAGCAG GCCAGACAAC AAAGCGCAAT GCTCGTGCCC 1200
GTGTACAATC AATCGCCGCT GGTCACTGCT GAGAGGGGCG TGGCCTCTGG TCTCCGTTCC 1260
GTCAATAAGC TGCCTCGCCA CCGGCCGCTG GCTCGCACAC AGAGTGCTCC TTTGCCCCAA 1320
TCCCCCCAGG CCCTGCAGCA GCTGGTGGTC CAGCAGCAGC ACCAGCACTT CCTGGAGAAA 1380
CATTACAAGG TACGCACACA GACACACACA ATGCTGTCAA AAGGGGCAGA CCTCCCCCGG 1440
CCCCCGCCCA CTCACCCAGA GGAGACGGAG GAGGAGCTGA CAGAGAGCAG TGACATGCAG 1500
GAGGACGAAG GGGAGGCGAG CGTGAGCAGG GAGGGGTCCC ATGACCGCAA ACACGCCTCC 1560
GAACAGCTCT TTGTGCACGT GAAGGGGGAG GAGGAGCACT CAAGTGGCCA GGTCAGAGAT 1620
GAGAGCACAG AGAGTGAGCT GGAAGAAGAG GAGGAGGACG ATGAGCGGTT GAAAGGCTCA 1680
CACACACGCA AACGTAGTGC TGACGCCACA CCCCTGCAGC CGCTGGGCGT CTTCCAGTCC 1740
TCGTTGGCCC ACAAATATCT GGGACGGTCC AAGTCGTCTC CCACAGCGTC CATCAATCCT 1800
GTCAAGCACC TCTTCACAAC TGGTCTGGTC TACGACAGTC TGATGTTGAA GCACCAGTGT 1860
GTGTGTGGAA ATGCCCACAT CCATCCGGAG CATGCAGGCC GGGTCCAGAG CATCTGGTCC 1920
AGACTGCAGG AGACGGGCCT ACTGGGCCGC TGTGAGAGGA TACGTGGACG GAAGGCATCT 1980
CTGGATGAGA TCCAGTCTGT TCATTCGGAG TTTCACACGC TGCTGTACGG AACCAGCCCA 2040
CTCAATCGGC ACAAACTGGA CCACAAGAAG CTTCTGGGTC CCATCAGTCA GAAGATGTAC 2100
GCCGTCCTTC CCTGGGAGGC ATCGGGGAGT CCACAGCCAT GTCCGTCCCT TTTTGGTTTG 2160
AGCAGAGCAA CGTTGTGGGC CTTTGGTTCT GTCCCGGGTC TGATTCTGTC CCGCATGCTT 2220
TCGTCTGACA GGGGGTTCTG CTTCTTCAAC TCCGTGGCCA TTGCTGCTAA ACTGCTGCAG 2280
CAGAAGCTGG GCGTGGGGAA GATCCTGATC GTGGACTGGG ACATTCACCA TGGAAACGGC 2340
ACCCAGCAGG CCTTTTACAC GGATCCCAGC GTGCTCTACA TCTCGCTGCA TCGCTATGAC 2400
GATGGAAACT TCTTCCCCGG CAGCGGAGCC CCTGAGGAGG TGGGGTCCGG AGCAGGTGTG 2460
GGCTTTAACG TGAACATAGC GTGGACCGGA GGCGTGGAGC CCCCCATGGG GGATGTGGAG 2520
TACCTCGTTG CTTTCAGGAG TGTGGTGATG CCCATCGCTC AGCGGTTCAG TCCTGATGTG 2580
GTTCTGGTGT CTGCGGGCTT TGATGCAGTG GAGGGCCATC AGTCTCCTCT GGGGGGCTAC 2640
AACGTCTCTG CCAAATGTTT CGGACAGCTC ACCCAGCTGC TGATGGGTCT GGCGGGTGGG 2700
CGGGTGGTCA TGGCTCTGGA GGGGGGCCAC GACCTGACTG CCATCTGTGA CGCGTCGGAG 2760
GCCTGCGTGT CTGCACTGCT GGGAGACCTG TGGCCGCTGG ACAATCCCTG TCCTAAAGCT 2820
TGTGCCTCCT TGGAGCGGGT CATCGAGATC CAGAGTAAAC ACTGGTCCTG TCTTCAGCCT 2880
TTGTCCCAGA CCAGCGGGCG CTCGCAGCCT GACGGAGGTC AGGGGACGCA GTCGGAGAAG 2940
GACGAGGCGG AAACGGTCAG TGCCATGGCG TCGCTGAGCG TGGACGTGGA GCAGCCTGTT 3000
TCTGTTCCTG AGAGCACGGA CAGCAGCAGG TCCACAGAGG AGCCCATGGA GGAGGAGCCT 3060
ATCTTG 3067
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 81 0.0 1240
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 80 0.0 1216
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 77 0.0 1194
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 76 0.0 1129
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 74 0.0 1124
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 74 0.0 1120
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 69 0.0 1020
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 67 0.0 957
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 61 0.0 902
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 61 0.0 902
WERAM-Myl-0072 ENSMLUP00000005848.2 Myotis lucifugus 61 0.0 893
WERAM-Aim-0213 ENSAMEP00000019373.1 Ailuropoda melanoleuca 61 0.0 891
WERAM-Mam-0051 ENSMMUP00000008945.2 Macaca mulatta 62 0.0 886
WERAM-Chs-0039 ENSCSAP00000014557.1 Chlorocebus sabaeus 62 0.0 886
WERAM-Bot-0149 ENSBTAP00000053450.2 Bos taurus 60 0.0 885
WERAM-Hos-0075 ENSP00000468004.1 Homo sapiens 62 0.0 885
WERAM-Ova-0067 ENSOARP00000007394.1 Ovis aries 60 0.0 884
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 62 0.0 884
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 61 0.0 884
WERAM-Caj-0108 ENSCJAP00000018977.1 Callithrix jacchus 60 0.0 883
WERAM-Ict-0187 ENSSTOP00000016795.1 Ictidomys tridecemlineatus 60 0.0 882
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 62 0.0 881
WERAM-Tut-0123 ENSTTRP00000009926.1 Tursiops truncatus 61 0.0 880
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 61 0.0 880
WERAM-Otg-0108 ENSOGAP00000009396.2 Otolemur garnettii 61 0.0 879
WERAM-Ran-0140 ENSRNOP00000052059.4 Rattus norvegicus 61 0.0 875
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 60 0.0 874
WERAM-Mup-0103 ENSMPUP00000009452.1 Mustela putorius furo 62 0.0 866
WERAM-Loa-0216 ENSLAFP00000022496.1 Loxodonta africana 60 0.0 864
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 61 0.0 858
WERAM-Cap-0214 ENSCPOP00000014276.1 Cavia porcellus 60 0.0 846
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 60 0.0 815
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 57 0.0 788
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 57 0.0 778
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 52 0.0 738
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 53 0.0 731
WERAM-Anp-0079 ENSAPLP00000009519.1 Anas platyrhynchos 51 0.0 731
WERAM-Pes-0105 ENSPSIP00000013270.1 Pelodiscus sinensis 51 0.0 725
WERAM-Paa-0157 ENSPANP00000020771.1 Papio anubis 61 0.0 710
WERAM-Pat-0158 ENSPTRP00000032389.5 Pan troglodytes 50 0.0 705
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 59 0.0 702
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 49 0.0 677
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 49 0.0 672
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 48 0.0 664
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 49 0.0 662
WERAM-Sus-0129 ENSSSCP00000018401.2 Sus scrofa 59 5e-178 622
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 61 2e-172 603
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 63 3e-169 593
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 48 3e-169 593
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 63 2e-161 567
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 46 1e-156 551
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 59 5e-156 549
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 61 3e-154 543
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 60 9e-152 535
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 59 1e-150 531
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 58 1e-149 528
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 57 9e-139 492
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 58 5e-133 473
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 54 1e-126 452
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 57 9e-120 429
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 48 6e-119 426
WERAM-Gam-0006 ENSGMOP00000000768.1 Gadus morhua 54 4e-117 420
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 56 2e-104 377
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 58 3e-93 340
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 42 1e-89 328
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 42 3e-81 301
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 53 4e-71 267
Created Date 25-Jun-2016