WERAM Information

Tag Content
WERAM ID WERAM-Orla-0035
Ensembl Protein ID ENSORLP00000004750.1
Gene Name hdac12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000003817.1 ENSORLT00000004751.1 ENSORLP00000004750.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.50e-08 34.8 5 123
Organism Oryzias latipes
Domain Profile
  HDAC Class-I
           class-1.txt 172 GDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDsla 260
                           GDg    f++   v+t s+h  ++  fP        +++++    +++ l+dg++De+y + ++  +  ++++f+P+ v+ + G D   
  ENSORLP00000004750.1   5 GDGTAFIFKEEPAVFTFSVHCGKN--FPL-------RKQES---DLDISLEDGLEDEEYLSTVEAYLPWLLQTFRPDLVLYDAGVDPHW 81 
                           888888888888889999888777..773.......22232...47899**************************************** PP
           class-1.txt 261 gDrlgefnlsikghae....cvkfvksfnlpllvlGGGGYtl 298
                           +D lg  +l+ +g+ +    ++k   +  +p+  + GGGY+ 
  ENSORLP00000004750.1  82 EDELGRLHLTDQGLYRrdlfVMKTTVNQGVPIATVIGGGYSR 123
                           *************98753333444445589**********74 PP
Protein Sequence
(Fasta)		TYTRGDGTAF IFKEEPAVFT FSVHCGKNFP LRKQESDLDI SLEDGLEDEE YLSTVEAYLP 60
WLLQTFRPDL VLYDAGVDPH WEDELGRLHL TDQGLYRRDL FVMKTTVNQG VPIATVIGGG 120
YSRDMDRLAL RHSIVHRAAT QVWRECGM 148
Nucleotide Sequence
(Fasta)		GATTTAGACG TACACCAGGG GGGATGGTAC CGCTTTCATA TTCAAAGAGG AGCCAGCTGT 60
GTTTACATTC TCTGTGCATT GTGGGAAAAA CTTCCCCCTC CGCAAACAAG AAAGCGACCT 120
AGATATCAGC TTGGAGGATG GGCTTGAAGA CGAGGAGTAC CTCTCCACTG TAGAAGCTTA 180
CCTGCCATGG CTGCTGCAGA CGTTTCGTCC AGACCTGGTT CTGTACGACG CAGGCGTCGA 240
TCCCCACTGG GAAGATGAAC TTGGCAGACT TCATCTTACC GACCAAGGGC TCTACCGGAG 300
AGACCTGTTT GTGATGAAGA CCACGGTGAA TCAAGGTGTT CCTATTGCCA CTGTTATTGG 360
TGGAGGATAC TCGAGAGACA TGGACAGACT GGCCCTCAGA CACTCCATCG TCCACAGAGC 420
AGCCACTCAG GTTTGGAGGG AGTGTGGAAT GTAACAATGT CTCCACTGAT GGAGCTCTGT 480
CTCTGGACTG TTTCCAGGCT TCTGTGCACC AACACATAGA AATAAAATAA AACAGCCAGG 540
TTATTGGGAA GATGAGAACA ATAAAGATCC ACT 574
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xim-0076 ENSXMAP00000007002.1 Xiphophorus maculatus 84 2e-72 268
WERAM-Pof-0016 ENSPFOP00000001444.2 Poecilia formosa 84 2e-70 261
WERAM-Gaa-0118 ENSGACP00000015262.1 Gasterosteus aculeatus 82 1e-69 258
WERAM-Dar-0212 ENSDARP00000129931.1 Danio rerio 76 1e-65 245
WERAM-Leo-0077 ENSLOCP00000010093.1 Lepisosteus oculatus 70 4e-61 230
WERAM-Lac-0085 ENSLACP00000010878.1 Latimeria chalumnae 69 2e-58 221
WERAM-Gam-0043 ENSGMOP00000004756.1 Gadus morhua 76 3e-58 220
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 83 8e-56 212
WERAM-Chr-0005 EDP03778 Chlamydomonas reinhardtii 60 2e-36 148
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 50 3e-35 144
WERAM-Php-0087 PP1S34_438V6.1 Physcomitrella patens 38 2e-24 108
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 42 3e-23 104
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 33 2e-14 75.5
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 31 5e-14 73.9
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 34 6e-14 73.6
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 35 1e-13 72.8
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 33 1e-13 72.8
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 34 1e-13 72.8
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 34 2e-13 72.0
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 35 2e-13 71.6
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 35 2e-13 71.6
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 32 3e-13 71.6
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 35 3e-13 71.2
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 35 3e-13 71.2
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 35 3e-13 71.2
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 35 3e-13 71.2
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 35 3e-13 71.2
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 32 4e-13 71.2
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 35 4e-13 70.9
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 34 8e-13 70.1
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 34 8e-13 69.7
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 34 9e-13 69.7
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 34 1e-12 69.3
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 31 1e-12 69.3
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 34 1e-12 68.9
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 34 2e-12 68.9
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 34 2e-12 68.9
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 34 2e-12 68.9
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 34 2e-12 68.6
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 34 2e-12 68.6
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 34 2e-12 68.6
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 31 2e-12 68.6
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 31 2e-12 68.6
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 34 2e-12 68.6
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 30 3e-12 68.2
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 30 5e-12 67.4
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 34 5e-12 67.0
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 33 6e-12 67.0
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 30 6e-12 67.0
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 30 7e-12 66.6
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 33 1e-11 65.9
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 36 1e-11 65.9
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 33 1e-11 65.9
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 33 1e-11 65.9
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 31 2e-11 65.5
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 33 2e-11 65.1
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 31 2e-11 65.1
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 29 3e-11 64.7
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 32 3e-11 64.7
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 39 4e-11 64.3
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 29 6e-11 63.9
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 30 7e-11 63.5
WERAM-Sei-0028 Si006784m Setaria italica 28 7e-11 63.2
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 29 1e-10 62.8
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 29 1e-10 62.4
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 29 1e-10 62.4
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 29 1e-10 62.4
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 29 1e-10 62.4
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 29 1e-10 62.4
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 26 1e-10 62.4
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 38 2e-10 62.0
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 26 3e-10 61.2
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 27 4e-10 61.2
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 26 1e-09 58.9
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 29 2e-09 58.9
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 27 2e-09 58.5
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 29 3e-09 58.2
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 27 3e-09 58.2
WERAM-Tra-0289 Traes_7AL_CE76BC38A.2 Triticum aestivum 27 3e-09 57.8
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 27 3e-09 57.8
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 27 4e-09 57.8
WERAM-Met-0014 AES59273 Medicago truncatula 27 4e-09 57.8
WERAM-Kll-0026 CAG98203 Kluyveromyces lactis 31 6e-09 57.0
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 31 7e-09 57.0
WERAM-Amt-0062 ERN16364 Amborella trichopoda 34 7e-09 57.0
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 30 7e-09 57.0
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 27 2e-08 55.1
WERAM-Sac-0016 YGL194C Saccharomyces cerevisiae 30 2e-08 55.1
WERAM-Lab-0007 EDR12637 Laccaria bicolor 31 2e-08 55.1
WERAM-Cag-0001 CAG57805 Candida glabrata 28 3e-08 54.7
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 29 4e-08 54.3
WERAM-Asg-0026 AAS53543 Ashbya gossypii 28 6e-08 53.9
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 30 8e-08 53.5
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 23 8e-08 53.1
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 29 8e-08 53.1
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 29 1e-07 52.8
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 29 2e-07 52.0
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 30 2e-07 51.6
WERAM-Aet-0055 EMT26973 Aegilops tauschii 26 4e-07 50.8
WERAM-Thc-0103 EOY29884 Theobroma cacao 26 5e-07 50.8
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 30 5e-07 50.8
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 29 6e-07 50.4
WERAM-Yal-0006 CAG81802 Yarrowia lipolytica 30 1e-06 49.7
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 28 2e-06 48.9
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 24 2e-06 48.5
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 29 2e-06 48.1
WERAM-Coi-0023 EAS33452 Coccidioides immitis 27 3e-06 48.1
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 31 3e-06 48.1
WERAM-Miv-0036 MVLG_05319T0 Microbotryum violaceum 29 5e-06 47.4
WERAM-Caa-0035 KGT64372 Candida albicans 29 9e-06 46.6
Created Date 25-Jun-2016