WERAM Information

Tag Content
WERAM ID WERAM-Leo-0077
Ensembl Protein ID ENSLOCP00000010093.1
Gene Name hdac12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000008308.1 ENSLOCT00000010105.1 ENSLOCP00000010093.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 6.50e-24 85.2 85 338
Organism Lepisosteus oculatus
Domain Profile
  HDAC Class-I
           class-1.txt  30 theLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnk 118
                           + +++l+ ++  + +++ p+  s+e l+++h+eey+e + + +++++e+   + + f         +g+ + c   tG++l aa+    
  ENSLOCP00000010093.1  85 VLNFLLKDQIITDKQVCIPEPVSQEALCRVHTEEYVENFITGKTSQKEQ---KRTGFV------WSKGIVHRCLYETGGTLLAAEI--A 162
                           5566666777778899999999*************98664443333332...223443......346788889999****998874..4 PP
           class-1.txt 119 keadiainwaGGlhhakkseasGfcyvnDivlailellk.kh..krvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdl 204
                            ++ +a   aGG hha+ s  +G+c +nD+ +a  + +  +h  +++l +d+d+h GDg    f+    v+t s+h  ++  fP   + 
  ENSLOCP00000010093.1 163 LQRGLASSTAGGTHHAFPSFGAGYCLLNDLAVAAKQWMDsSHpkRKILIVDLDVHQGDGTAYIFRDEPGVFTFSVHCGKN--FPVQKQQ 249
                           56789999**********************9999887764562257******************************9888..9965433 PP
           class-1.txt 205 sdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae....cvkfvksfnlpll 289
                           s           +++ +++g+ D+ y + +++ +  v+e f+P++v+ + G D   +D lg+  l+ +g+ +    +++ v +  +p+ 
  ENSLOCP00000010093.1 250 S----------DLDISIDEGMMDKDYLNTVETHLPWVLESFRPDVVLYDAGVDPHREDELGKLGLTDEGLYQrdmyVIDAVVRRGIPIA 328
                           3..........3789999***************************************************876555689999999***** PP
           class-1.txt 290 vlGGGGYtlrn 300
                            + GGGY+   
  ENSLOCP00000010093.1 329 TVIGGGYSR-D 338
                           *******74.4 PP
Protein Sequence
(Fasta)		MIPVCISATQ NAYYKQLFRS KHVTVFGDLL LRRRIVQHNF KWKRATHSKY EIEEGARGLP 60
VVHHSKYVCD LPPNHRFPMR KFPKVLNFLL KDQIITDKQV CIPEPVSQEA LCRVHTEEYV 120
ENFITGKTSQ KEQKRTGFVW SKGIVHRCLY ETGGTLLAAE IALQRGLASS TAGGTHHAFP 180
SFGAGYCLLN DLAVAAKQWM DSSHPKRKIL IVDLDVHQGD GTAYIFRDEP GVFTFSVHCG 240
KNFPVQKQQS DLDISIDEGM MDKDYLNTVE THLPWVLESF RPDVVLYDAG VDPHREDELG 300
KLGLTDEGLY QRDMYVIDAV VRRGIPIATV IGGGYSRDID RLALRHTIVH RAAVKVWETR 360
GL 362
Nucleotide Sequence
(Fasta)		TTATAAACCA CACACTAAGA AATATTGGGG TATTTCACTT TAAAATATCA AATATCCACT 60
ACACAATGCT GATTGAAAAG ACGCAGTATA CTACGTTAAA ATAATTACTA CAATACACGT 120
GGTAAAATAA CCTACACGCT GCCAGCGTTT CACCAGAAAC ATACAGTACG AAGGAAACGT 180
CAGCGTCTGA ATTTTAGTTC CTACTGTACC TCCCAACCTT TAAGGGAAAC ATGGCGTCTA 240
GATGTTACAA AGTATAGCAT TTCCTTAAAA TTGGATTTAG TGATTTCTAG TATTACAAGG 300
CAACTAATTT GGAAAGTCGG AAAAGTCACT GCTACCGGTG CATTTAAAAT ACGTGTTGTT 360
ATAACTGATA CAGTATTTCT GATCGGGATG GTTTCGTAAT AAGGCATAGT AACATAAACA 420
CAAACAAAAA TGATACCTGT ATGTATATCG GCTACACAAA ACGCATATTA TAAACAGCTT 480
TTTCGTTCTA AGCATGTGAC AGTCTTTGGG GATCTCCTTT TGCGCAGAAG AATTGTCCAG 540
CATAACTTCA AGTGGAAGAG AGCCACACAT AGCAAATACG AAATTGAAGA AGGAGCAAGA 600
GGTCTTCCTG TTGTCCATCA CAGTAAATAT GTTTGTGATC TTCCACCCAA TCACAGATTT 660
CCAATGAGAA AATTTCCCAA GGTCCTGAAC TTTCTTCTTA AAGATCAAAT AATAACAGAT 720
AAACAGGTGT GCATCCCCGA ACCGGTGTCT CAAGAGGCTC TCTGCCGTGT GCACACAGAG 780
GAGTATGTGG AAAACTTCAT AACTGGGAAG ACCAGCCAGA AGGAACAGAA AAGGACTGGA 840
TTTGTCTGGA GTAAAGGCAT AGTACATCGC TGCTTATATG AAACAGGTGG CACACTACTC 900
GCGGCCGAGA TTGCACTCCA AAGAGGACTG GCCAGCAGCA CGGCGGGGGG CACTCACCAT 960
GCCTTCCCCA GCTTTGGTGC AGGATACTGT CTCCTCAATG ACCTGGCGGT AGCGGCCAAG 1020
CAGTGGATGG ACAGCTCTCA CCCCAAGAGG AAGATCCTCA TCGTTGACCT GGATGTGCAC 1080
CAGGGAGATG GCACTGCTTA TATCTTCAGA GATGAGCCAG GTGTTTTCAC TTTTTCTGTG 1140
CATTGTGGGA AGAACTTTCC GGTTCAGAAA CAACAGAGTG ACCTGGATAT TAGCATTGAC 1200
GAAGGAATGA TGGATAAAGA TTACCTCAAT ACAGTCGAGA CACATCTCCC CTGGGTGCTG 1260
GAGAGTTTTC GTCCCGATGT GGTGCTCTAC GATGCTGGTG TTGACCCCCA CAGAGAGGAT 1320
GAATTGGGGA AACTTGGCTT AACAGATGAG GGACTGTATC AGAGGGACAT GTATGTTATT 1380
GATGCTGTTG TAAGGAGGGG CATTCCCATT GCCACAGTTA TTGGTGGAGG TTATTCCAGA 1440
GACATTGATA GACTGGCTCT CAGACATACT ATAGTCCACA GAGCTGCTGT AAAGGTGTGG 1500
GAAACCAGGG GGTTGTGACT ACAATGTGTG ATCATTCCAG TTGTTCCACA GAAAAAGATG 1560
TATAATGTCT GCCTACTTGA AGACCTTTTA TATTTTTCTT ATTCTGGATG AAAACATTTT 1620
TGTATTTGCA TTGAAGTTTT GTAAAAGATG AGGAAACACT GACAAACATA CTAATGTACA 1680
TGGACAATTA AGTTAGAAAA CATCAGTATG TTCTATGAGA CAAATTGCTG ATACTCAAAA 1740
GTTGCATTAT TAATGCATGC AATAAGTGCA TTTTATTTTA CAAGACAAAT ATACGATTAT 1800
TTTAAATTAA ATTCAGTTAA TTTTATGGAA ACCATGTCAT TATTATGCCT TTTTACTGTT 1860
AAGAAGTGTT TCTGTGCTGT CAAGAGACAT GTTGTGAATT CTCTTCTATA ATTTTCACAT 1920
AGGGGTCATA TTATTAAGGG TAATTATGCA TGTTGCTTTT TTCTTCAACT TGAATGTTTA 1980
CATACTGTTA TAAACGGGGG GTTATGAACA TTGAGAAAGA ACATCAGGAA ATGACCGAGC 2040
GGATTAATCA AAAAGTAAAT TAAATAATCA TAACTCCCAA CTTGTACTGT AAATGATTTC 2100
TGCCAAGAAT ATACCTAAGA ATACCACATT AATTATTTGT TCTCTGGCAC AGTTTTTGTG 2160
AAAAGAGCAA TAATTCAGGG ACACCCGATT AAGCAAATAT TAACAATGAC ATACAGAAGT 2220
TTACAGACAA GGTGTCTCAG AGGCCTAACA TCCTAACCAC ACAGAAAATC CCAGTCTCTT 2280
ACCCAGTATG CAATTCTTAA AGCCTACAAA GATCAGAATA AGAGATAAGC TGCTTTCTAA 2340
ACTAAATAGA ATACAACCTG TGGTTAAATC TCTCTATCAG CAAACCTGAA TGACACAGAA 2400
TAAATGGGAA TCTCCCTATA TCCCTATTCT AAAATGCACT CACTAAGCAG GAGGGCCTGT 2460
TTCTTAACTC AGGAACTCCA AGTTCCCTAA AAAAACTACA GAATAGCAAG CTTTCTTAAG 2520
ACCTCTTGCC TGGCACAGGC TTTATGTTTT GTATCCTATC ACGTGGTCTC TGTTCTTTTT 2580
CTCTGTTCTG TCTTGATCTG ATCTTATACG GTGTCTTTCT GGACTGTTGA TTGACACTTA 2640
ATCATTTACC CAGAACTTAA TTAACTAAGC CTAATTACTA AGGTAAACCA AGGTAGACTT 2700
TATGATTGCT TTTTTGACCA CTGAGTCTGG ACTCCCTACA TCTTAGAAAA CATTGCCTTT 2760
GCTTTGAAGC TGAAAATGTT GACACTATCT AGACATCATC CATTTTTTCT TTTGAGATAT 2820
ATCCATAGTT ATCTACAGAT GTAACATTCT GGTCTGCTTT GGAGTGTCTG TAGTAGGTTA 2880
AAGTGAATAT CCTTTTTTAT GTTTCTATGA AAAACTTGTT TTTATATATA AAATGCTTAT 2940
TTTAAAGTTG TGTTAATATC AGAACTACTG CAGCAGTAGT TTTGTAATGA AGATTAAGTC 3000
TACCTCACAG TCAAAATAGG TGCACAATAC TGGATGACCC TTGCAACTTG ATTAATATCA 3060
TTTTAAAATA AATGTTACAT TTCCATCACT GTTGCTTACA CATTTAATTT GTATTTTTTT 3120
ATATTTTCAT TCCTTAATTG TATGTATATA GATTTGACCA TGTTAAGCAT AGGTTGTGAA 3180
CCTAATTGAA CTACTGAAAT TGCTAAGTCT ATTTAACAAT AGTTACGAAA CGCTTTCTGT 3240
AAAGCAAATA GCCCGAACAT AATCAACGCT AATACCATAC ATGTTATGCC TTAGTAACAA 3300
CCTTCATACA CCATGTTCAA TAAAGGAGAT TGCTAAACCT ATTATTATTA TT 3353
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xim-0076 ENSXMAP00000007002.1 Xiphophorus maculatus 70 3e-139 492
WERAM-Pof-0016 ENSPFOP00000001444.2 Poecilia formosa 69 3e-139 491
WERAM-Gaa-0118 ENSGACP00000015262.1 Gasterosteus aculeatus 73 9e-138 487
WERAM-Lac-0085 ENSLACP00000010878.1 Latimeria chalumnae 72 2e-136 482
WERAM-Gam-0043 ENSGMOP00000004756.1 Gadus morhua 68 2e-124 442
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 69 8e-112 400
WERAM-Dar-0212 ENSDARP00000129931.1 Danio rerio 74 6e-92 335
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 46 2e-73 273
WERAM-Chr-0005 EDP03778 Chlamydomonas reinhardtii 49 2e-70 263
WERAM-Orla-0035 ENSORLP00000004750.1 Oryzias latipes 70 2e-60 230
WERAM-Php-0087 PP1S34_438V6.1 Physcomitrella patens 38 3e-56 216
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 39 5e-56 215
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 31 4e-35 145
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 30 2e-34 144
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 31 2e-34 144
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 31 3e-34 143
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 30 4e-34 142
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 29 8e-34 141
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 29 8e-34 141
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 30 9e-34 141
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 30 4e-33 139
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 29 4e-33 139
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 30 4e-33 139
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 30 4e-33 139
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 29 7e-33 138
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 29 9e-33 138
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 29 1e-32 137
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 30 2e-32 137
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 29 2e-32 137
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 30 2e-32 137
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 28 2e-32 137
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 29 3e-32 136
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 30 3e-32 136
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 28 3e-32 136
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 29 5e-32 135
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 29 5e-32 135
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 30 5e-32 135
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 29 6e-32 135
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 29 6e-32 135
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 28 7e-32 135
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 29 7e-32 135
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 29 1e-31 134
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 30 1e-31 134
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 30 1e-31 134
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 29 2e-31 134
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 29 2e-31 133
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 29 3e-31 133
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 29 5e-31 132
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 29 7e-31 132
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 28 1e-29 127
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 30 2e-29 127
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 27 4e-29 126
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 33 5e-29 125
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 28 5e-29 125
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 28 7e-29 125
WERAM-Sei-0028 Si006784m Setaria italica 27 9e-29 125
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 27 1e-28 124
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 28 1e-28 124
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 27 5e-28 122
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 27 7e-28 122
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 27 7e-28 122
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 27 7e-28 122
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 27 7e-28 122
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 27 7e-28 122
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 27 8e-28 122
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 28 2e-27 120
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 26 2e-27 120
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 28 2e-27 120
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 26 3e-27 120
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 28 3e-27 119
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 29 5e-27 119
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 33 1e-26 118
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 28 2e-26 117
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 26 5e-26 115
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 26 6e-26 115
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 26 8e-26 115
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 28 1e-25 114
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 30 1e-25 114
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 26 1e-25 114
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 26 2e-25 114
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 28 4e-25 112
WERAM-Met-0014 AES59273 Medicago truncatula 24 4e-25 112
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 24 1e-24 111
WERAM-Thc-0103 EOY29884 Theobroma cacao 24 2e-24 110
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 27 1e-23 108
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 31 1e-23 108
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 26 1e-23 107
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 33 6e-23 105
WERAM-Aet-0055 EMT26973 Aegilops tauschii 28 1e-22 104
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 29 2e-21 100
WERAM-Prp-0064 EMJ26901 Prunus persica 27 2e-21 100
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 25 7e-21 99.0
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 28 2e-20 97.4
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 27 4e-20 96.3
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 30 5e-20 96.3
WERAM-Cag-0003 CAG57932 Candida glabrata 29 8e-20 95.5
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 28 1e-19 94.4
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 27 2e-19 94.4
WERAM-Asg-0034 AAS54885 Ashbya gossypii 28 2e-19 93.6
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 27 4e-19 92.8
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 28 7e-19 92.0
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 28 8e-19 92.0
WERAM-Kop-0004 CAY67954 Komagataella pastoris 29 8e-19 92.0
WERAM-Lab-0007 EDR12637 Laccaria bicolor 27 1e-18 91.3
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 27 2e-18 90.9
WERAM-Aso-0022 CADAORAP00005645 Aspergillus oryzae 28 2e-18 90.9
WERAM-Phn-0003 SNOT_00459 Phaeosphaeria nodorum 28 2e-18 90.9
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 26 3e-18 90.5
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 27 8e-18 88.6
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 26 1e-17 88.2
WERAM-Caa-0018 KGT69072 Candida albicans 29 1e-17 88.2
WERAM-Coi-0024 EAS33504 Coccidioides immitis 28 2e-17 87.8
WERAM-Amt-0082 ERN02510 Amborella trichopoda 28 9e-17 85.1
Created Date 25-Jun-2016