| Tag |
Content |
| WERAM ID |
WERAM-Ocp-0102 |
| Ensembl Protein ID |
ENSOPRP00000009462.1 |
| Gene Name |
HDAC11 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-IV |
7.80e-166 |
550.3 |
31 |
317 |
| HDAC |
Class-I |
5.40e-27 |
94.8 |
30 |
310 |
|
| Organism |
Ochotona princeps |
| Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89
leklhpfda+kw+kvi+flke+kll+d++lvea+eas+edllvvhtr+yl++lk+s++vatiteip+++flpnflvqrkvlrplr+q+g
ENSOPRP00000009462.1 31 LEKLHPFDAGKWGKVINFLKEDKLLTDGMLVEAQEASDEDLLVVHTRRYLNELKWSFAVATITEIPPLIFLPNFLVQRKVLRPLRTQTG 119
79*************************************************************************************** PP
class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178
Gti+a+klav+rGwain+GGGfhhcss+rGGGfcayaditlaikflfer++++s+v+iidldahqGnGherdf++dkrvyi+dvynr+i
ENSOPRP00000009462.1 120 GTIMAGKLAVDRGWAINIGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGVSKVTIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 208
***************************************************************************************** PP
class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267
yp+dr+ak+airrkvele+gtedeeyl+k+er+++k+lqe+ pd+vvynaGtd+leGdrlG+l+isp givkrde+vfr+vr +++pi+
ENSOPRP00000009462.1 209 YPGDRFAKQAIRRKVELEWGTEDEEYLDKVERHMEKALQEYMPDVVVYNAGTDILEGDRLGGLSISPGGIVKRDELVFRVVRGHQVPIL 297
***************************************************************************************** PP
class-4.txt 268 mvtsGGyqkrsarviadsil 287
mvtsGGyqkr+ar+iadsil
ENSOPRP00000009462.1 298 MVTSGGYQKRTARIIADSIL 317
******************95 PP
HDAC Class-I
class-1.txt 15 hygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkv.epenaeelskelkkfnvgedcPvfdglfeyc 102
++ hp ++ + +++ + +l + +v++++as e+ll +h+ y++ lk + + + +e++ + v ++
ENSOPRP00000009462.1 30 GLEKLHPFDAGKWGKVINFLKEDKLLTDGMLVEAQEASDEDLLVVHTRRYLNELKWSfAVATITEIPP----LIFLPNFLVQRKVLRPL 114
55667777888888888888888888888889999999999999999999998875414455555553....33334445556666677 PP
class-1.txt 103 qlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdrvmtv 188
++ tG+++ a k L ++ ain GG+hh ++ Gfc Di lai l ++v+ id+d h G+g e f +rv +
ENSOPRP00000009462.1 115 RTQTGGTIMAGK-LAV-DRGWAINIGGGFHHCSSDRGGGFCAYADITLAIKFLFErveGVSKVTIIDLDAHQGNGHERDFMGDKRVYIM 201
899****98765.543.46789****************************998772335689************************987 PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae. 276
+ y+ + +Pg + + + v l+ g +De+y +++ ++k ++ + P++vv + G+D l gDrlg ++s g+ +
ENSOPRP00000009462.1 202 DV--YNRHIYPGDRFAK-QAIRR------KVELEWGTEDEEYLDKVERHMEKALQEYMPDVVVYNAGTDILEGDRLGGLSISPGGIVKr 281
66..88889**964333.33333......489**************************************************9998765 PP
class-1.txt 277 ...cvkfvksfnlpllvlGGGGYtlrnvaR 303
+ ++v+ +++p+l++ GGY++r aR
ENSOPRP00000009462.1 282 delVFRVVRGHQVPILMVTSGGYQKRT-AR 310
6667899****************9874.45 PP
|
Protein Sequence
(Fasta) | MPHSTQLYQH VPETRWPIVY SPRYNITFMG LEKLHPFDAG KWGKVINFLK EDKLLTDGML 60
VEAQEASDED LLVVHTRRYL NELKWSFAVA TITEIPPLIF LPNFLVQRKV LRPLRTQTGG 120
TIMAGKLAVD RGWAINIGGG FHHCSSDRGG GFCAYADITL AIKFLFERVE GVSKVTIIDL 180
DAHQGNGHER DFMGDKRVYI MDVYNRHIYP GDRFAKQAIR RKVELEWGTE DEEYLDKVER 240
HMEKALQEYM PDVVVYNAGT DILEGDRLGG LSISPGGIVK RDELVFRVVR GHQVPILMVT 300
SGGYQKRTAR IIADSILNLH SLGLIGPVSR DVSAQSSDTP LLPPTVP 347Protein Fasta Sequence
>ENSOPRP00000009462.1|Class-I|Ochotona princeps
MPHSTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEDKLLTDGMLVEAQEASDEDLLVVHTRRYLNELKWSFAVATITEIPPLIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVDRGWAINIGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGVSKVTIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDEEYLDKVERHMEKALQEYMPDVVVYNAGTDILEGDRLGGLSISPGGIVKRDELVFRVVRGHQVPILMVTSGGYQKRTARIIADSILNLHSLGLIGPVSRDVSAQSSDTPLLPPTVP |
Nucleotide Sequence
(Fasta) | ATGCCGCATT CCACCCAGCT CTACCAGCAT GTGCCCGAGA CTCGCTGGCC CATCGTATAC 60
TCGCCTCGTT ATAACATCAC CTTTATGGGC CTGGAGAAGC TGCACCCGTT TGATGCTGGG 120
AAATGGGGCA AAGTCATCAA TTTCCTGAAA GAGGACAAGT TGCTGACTGA TGGCATGCTG 180
GTGGAGGCGC AGGAGGCCTC GGATGAGGAC CTGCTGGTGG TGCACACGAG GCGTTATCTC 240
AACGAGCTCA AGTGGTCTTT TGCTGTCGCC ACCATCACCG AAATTCCTCC TCTCATCTTC 300
CTCCCCAACT TCCTGGTGCA GAGAAAGGTG CTAAGGCCTC TCCGGACCCA GACAGGAGGA 360
ACCATAATGG CGGGGAAGCT GGCTGTGGAC CGAGGCTGGG CCATCAATAT TGGGGGCGGC 420
TTCCACCATT GCTCTAGCGA TCGGGGCGGC GGCTTCTGTG CCTACGCAGA CATCACGCTG 480
GCCATTAAGT TCCTGTTTGA GCGAGTGGAG GGCGTCTCCA AGGTCACCAT CATTGACCTT 540
GATGCCCATC AGGGCAATGG ACACGAGCGG GACTTCATGG GGGACAAGCG TGTGTACATC 600
ATGGATGTTT ACAACCGCCA CATCTACCCC GGGGACCGCT TTGCCAAGCA GGCCATCAGG 660
CGCAAGGTGG AGCTGGAGTG GGGCACAGAA GATGAGGAAT ACCTGGATAA AGTGGAGCGG 720
CACATGGAGA AGGCGCTGCA GGAGTATATG CCCGATGTCG TGGTGTACAA CGCCGGCACT 780
GACATCCTTG AGGGCGACCG CCTTGGCGGG CTCTCCATCA GCCCAGGGGG CATCGTGAAG 840
CGAGATGAGC TTGTGTTCCG GGTGGTTCGC GGCCACCAGG TGCCCATCCT TATGGTGACC 900
TCGGGCGGCT ACCAGAAGCG CACAGCCCGC ATCATTGCCG ACTCCATCCT TAACCTGCAC 960
AGCCTTGGGC TCATCGGGCC CGTATCCCGT GACGTCTCAG CTCAGAGCTC AGACACACCA 1020
CTGCTTCCGC CCACAGTGCC CTGA
1045Nucleotide Fasta Sequence
>ENSOPRP00000009462.1|Class-I|Ochotona princeps
ATGCCGCATTCCACCCAGCTCTACCAGCATGTGCCCGAGACTCGCTGGCCCATCGTATACTCGCCTCGTTATAACATCACCTTTATGGGCCTGGAGAAGCTGCACCCGTTTGATGCTGGGAAATGGGGCAAAGTCATCAATTTCCTGAAAGAGGACAAGTTGCTGACTGATGGCATGCTGGTGGAGGCGCAGGAGGCCTCGGATGAGGACCTGCTGGTGGTGCACACGAGGCGTTATCTCAACGAGCTCAAGTGGTCTTTTGCTGTCGCCACCATCACCGAAATTCCTCCTCTCATCTTCCTCCCCAACTTCCTGGTGCAGAGAAAGGTGCTAAGGCCTCTCCGGACCCAGACAGGAGGAACCATAATGGCGGGGAAGCTGGCTGTGGACCGAGGCTGGGCCATCAATATTGGGGGCGGCTTCCACCATTGCTCTAGCGATCGGGGCGGCGGCTTCTGTGCCTACGCAGACATCACGCTGGCCATTAAGTTCCTGTTTGAGCGAGTGGAGGGCGTCTCCAAGGTCACCATCATTGACCTTGATGCCCATCAGGGCAATGGACACGAGCGGGACTTCATGGGGGACAAGCGTGTGTACATCATGGATGTTTACAACCGCCACATCTACCCCGGGGACCGCTTTGCCAAGCAGGCCATCAGGCGCAAGGTGGAGCTGGAGTGGGGCACAGAAGATGAGGAATACCTGGATAAAGTGGAGCGGCACATGGAGAAGGCGCTGCAGGAGTATATGCCCGATGTCGTGGTGTACAACGCCGGCACTGACATCCTTGAGGGCGACCGCCTTGGCGGGCTCTCCATCAGCCCAGGGGGCATCGTGAAGCGAGATGAGCTTGTGTTCCGGGTGGTTCGCGGCCACCAGGTGCCCATCCTTATGGTGACCTCGGGCGGCTACCAGAAGCGCACAGCCCGCATCATTGCCGACTCCATCCTTAACCTGCACAGCCTTGGGCTCATCGGGCCCGTATCCCGTGACGTCTCAGCTCAGAGCTCAGACACACCACTGCTTCCGCCCACAGTGCCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
