Tag |
Content |
WERAM ID |
WERAM-Myl-0189 |
Ensembl Protein ID |
ENSMLUP00000015766.2 |
Gene Name |
HDAC11 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-IV |
3.00e-166 |
552 |
31 |
317 |
HDAC |
Class-I |
1.00e-24 |
87.7 |
29 |
309 |
|
Organism |
Myotis lucifugus |
Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89 leklhpfda+kw+kvi flkeekll+d++lveareas+edllvvhtr+yl++lk+s++vatiteip+v+flpnflvqrkvl+plr+q+g ENSMLUP00000015766.2 31 LEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRIQTG 119 79*************************************************************************************** PP class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178 Gti+a+klaverGwainvGGGfhhcss+rGGGfcayaditlaikflfer+++isr++i+dldahqGnGherdf++d+rvyi+dvynr+i ENSMLUP00000015766.2 120 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDQRVYIMDVYNRHI 208 ***************************************************************************************** PP class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267 yp+dr+ak+airrkvele+gted+eyl+k+er+lk++lqe+ pd++vynaGtd+leGdrlG+l+isp+givkrde+vfr++r ++pi+ ENSMLUP00000015766.2 209 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNLKRALQEHPPDVMVYNAGTDILEGDRLGGLSISPQGIVKRDELVFRVARRCQVPIL 297 ***************************************************************************************** PP class-4.txt 268 mvtsGGyqkrsarviadsil 287 mvtsGGyqkr+ar+iadsil ENSMLUP00000015766.2 298 MVTSGGYQKRTARIIADSIL 317 ******************95 PP
HDAC Class-I
class-1.txt 14 yhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkv.epenaeelskelkkfnvgedcPvfdglfey 101 + ++ hp ++ + +++ + +l + +v++++as e+ll +h+ y++ lk + + + +e++ + + v ++ + ENSMLUP00000015766.2 29 MGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASEEDLLVVHTRRYLNELKWSfAVATITEIPPVIFL----PNFLVQRKVLKP 113 5556678888888888888888888888888999999999999999999999999854155566666644433....334455666677 PP class-1.txt 102 cqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdrvmt 187 ++ tG+++ a kL e+ ain GG+hh ++ Gfc Di lai l +r + +d+d h G+g e f +rv ENSMLUP00000015766.2 114 LRIQTGGTIMAG-KLA-VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFErveGISRATIVDLDAHQGNGHERDFMGDQRVYI 200 799******876.554.45789*****************************99987222467999**********************98 PP class-1.txt 188 vsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276 + + y+ + +Pg + + + v l+ g +D++y +++ +++ ++ + P+++v + G+D l gDrlg ++s +g+ + ENSMLUP00000015766.2 201 MDV--YNRHIYPGDRFAK-QAIRR------KVELEWGTEDDEYLDKVERNLKRALQEHPPDVMVYNAGTDILEGDRLGGLSISPQGIVK 280 766..88889**964333.33333......489*****************************************************987 PP class-1.txt 277 ....cvkfvksfnlpllvlGGGGYtlrnva 302 + ++ ++ ++p+l++ GGY++r a ENSMLUP00000015766.2 281 rdelVFRVARRCQVPILMVTSGGYQKRT-A 309 566567888999************9874.4 PP
|
Protein Sequence (Fasta) | RPHTTQLYQH VPETRWPIVY SPRYNITFMG LEKLHPFDAG KWGKVISFLK EEKLLSDGML 60 VEAREASEED LLVVHTRRYL NELKWSFAVA TITEIPPVIF LPNFLVQRKV LKPLRIQTGG 120 TIMAGKLAVE RGWAINVGGG FHHCSSDRGG GFCAYADITL AIKFLFERVE GISRATIVDL 180 DAHQGNGHER DFMGDQRVYI MDVYNRHIYP GDRFAKQAIR RKVELEWGTE DDEYLDKVER 240 NLKRALQEHP PDVMVYNAGT DILEGDRLGG LSISPQGIVK RDELVFRVAR RCQVPILMVT 300 SGGYQKRTAR IIADSILNLY DLGLIGPESA SISAQNSDTP ML 342Protein Fasta Sequence
>ENSMLUP00000015766.2|Class-I|Myotis lucifugus RPHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRIQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDQRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNLKRALQEHPPDVMVYNAGTDILEGDRLGGLSISPQGIVKRDELVFRVARRCQVPILMVTSGGYQKRTARIIADSILNLYDLGLIGPESASISAQNSDTPML
|
Nucleotide Sequence (Fasta) | CCATGCCTAC GGAAGGCCGC ACACAACCCA GCTGTACCAG CACGTGCCGG AGACCCGGTG 60 GCCCATCGTG TACTCTCCCC GCTACAATAT AACCTTCATG GGTCTGGAGA AGCTGCATCC 120 CTTTGACGCC GGAAAATGGG GCAAGGTGAT CAGCTTTCTA AAAGAAGAGA AGCTTCTGTC 180 AGACGGCATG CTGGTAGAGG CACGGGAAGC CTCAGAGGAA GACCTGCTGG TGGTGCACAC 240 GAGACGTTAT CTCAACGAGC TGAAGTGGTC CTTTGCTGTC GCTACCATCA CAGAAATCCC 300 CCCTGTCATC TTTCTCCCCA ACTTCCTTGT GCAGAGGAAG GTGCTGAAGC CCCTTCGGAT 360 CCAGACAGGA GGAACCATAA TGGCGGGGAA GCTGGCAGTG GAGCGAGGCT GGGCCATCAA 420 TGTGGGTGGT GGCTTCCATC ACTGCTCCAG CGACCGGGGA GGGGGCTTCT GCGCCTACGC 480 GGACATCACG CTCGCCATCA AGTTTCTGTT TGAGCGAGTG GAGGGCATCT CCAGGGCCAC 540 CATTGTTGAT CTTGATGCCC ATCAGGGCAA TGGGCACGAA CGGGACTTCA TGGGTGACCA 600 GCGTGTGTAC ATCATGGATG TCTACAACCG CCACATCTAC CCTGGAGACC GCTTTGCCAA 660 GCAGGCCATC AGGCGGAAGG TAGAGCTGGA GTGGGGCACC GAGGATGACG AGTACCTGGA 720 TAAAGTGGAG AGGAACCTCA AGAGAGCCCT TCAGGAGCAT CCTCCCGACG TCATGGTGTA 780 CAACGCAGGC ACCGACATCC TCGAGGGTGA CCGCCTTGGA GGACTGTCCA TTAGCCCACA 840 GGGCATCGTG AAGCGGGATG AGCTGGTGTT CCGGGTGGCC CGCAGATGTC AGGTGCCCAT 900 CCTCATGGTG ACCTCAGGCG GGTACCAGAA GCGCACAGCC CGCATCATTG CTGACTCCAT 960 CCTTAATTTG TATGACCTGG GGCTCATTGG TCCTGAGTCA GCCAGCATCT CAGCACAGAA 1020 CTCAGACACA CCTATGCTAC
1041Nucleotide Fasta Sequence
>ENSMLUP00000015766.2|Class-I|Myotis lucifugus CCATGCCTACGGAAGGCCGCACACAACCCAGCTGTACCAGCACGTGCCGGAGACCCGGTGGCCCATCGTGTACTCTCCCCGCTACAATATAACCTTCATGGGTCTGGAGAAGCTGCATCCCTTTGACGCCGGAAAATGGGGCAAGGTGATCAGCTTTCTAAAAGAAGAGAAGCTTCTGTCAGACGGCATGCTGGTAGAGGCACGGGAAGCCTCAGAGGAAGACCTGCTGGTGGTGCACACGAGACGTTATCTCAACGAGCTGAAGTGGTCCTTTGCTGTCGCTACCATCACAGAAATCCCCCCTGTCATCTTTCTCCCCAACTTCCTTGTGCAGAGGAAGGTGCTGAAGCCCCTTCGGATCCAGACAGGAGGAACCATAATGGCGGGGAAGCTGGCAGTGGAGCGAGGCTGGGCCATCAATGTGGGTGGTGGCTTCCATCACTGCTCCAGCGACCGGGGAGGGGGCTTCTGCGCCTACGCGGACATCACGCTCGCCATCAAGTTTCTGTTTGAGCGAGTGGAGGGCATCTCCAGGGCCACCATTGTTGATCTTGATGCCCATCAGGGCAATGGGCACGAACGGGACTTCATGGGTGACCAGCGTGTGTACATCATGGATGTCTACAACCGCCACATCTACCCTGGAGACCGCTTTGCCAAGCAGGCCATCAGGCGGAAGGTAGAGCTGGAGTGGGGCACCGAGGATGACGAGTACCTGGATAAAGTGGAGAGGAACCTCAAGAGAGCCCTTCAGGAGCATCCTCCCGACGTCATGGTGTACAACGCAGGCACCGACATCCTCGAGGGTGACCGCCTTGGAGGACTGTCCATTAGCCCACAGGGCATCGTGAAGCGGGATGAGCTGGTGTTCCGGGTGGCCCGCAGATGTCAGGTGCCCATCCTCATGGTGACCTCAGGCGGGTACCAGAAGCGCACAGCCCGCATCATTGCTGACTCCATCCTTAATTTGTATGACCTGGGGCTCATTGGTCCTGAGTCAGCCAGCATCTCAGCACAGAACTCAGACACACCTATGCTAC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |