WERAM Information

Tag Content
WERAM ID WERAM-Gam-0043
Ensembl Protein ID ENSGMOP00000004756.1
Gene Name hdac12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000004486.1 ENSGMOT00000004897.1 ENSGMOP00000004756.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.00e-23 84.5 48 294
Organism Gadus morhua
Domain Profile
  HDAC Class-I
           class-1.txt  44 eivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlh 132
                           ++ +p+  s e l  +h+ ey++ + + ++e++ +           +  P  +gl   c+  tG++l aa+     e+ +a   aGG h
  ENSGMOP00000004756.1  48 QVWTPELVSEEVLNCVHTTEYVKNFVSGKVEEKAQR---------RTGFPWSKGLVRRCRYETGGTLLAAEV--ALERGMACSTAGGTH 125
                           555555555555555666666655544444433332.........24569999*************999875..44677999******* PP
           class-1.txt 133 hakkseasGfcyvnDivlailellkkh...........krvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgae 210
                           ha+ ++ sGfc +nD+ ++   l+ +            ++vl +d+d+h GDg    f+    v+t s+h  ++  fP     + ++ +
  ENSGMOP00000004756.1 126 HAFPDRGSGFCLINDLAVTARYLRNSSscpssssiaggRKVLIVDLDVHQGDGTAFIFKDEPGVFTFSIHGEKN--FPL----HKQRSD 208
                           ********************99998642333333334369******************************7666..994....444443 PP
           class-1.txt 211 kgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae....cvkfvksfnlpllvlGGGG 295
                                 ++v l dg +D++y + +++ +  +++ f+P+ v+ + G D  ++D lg   l+  g+ +    ++k v    +p+  + GGG
  ENSGMOP00000004756.1 209 ------LDVSLPDGTEDRQYLSTVEEHLPGLLDSFRPDLVLYDAGVDPHTEDDLGRLRLTDAGLYQrdlyVLKTVVARGIPIATVIGGG 291
                           ......679999***************************************************9765555677777779********** PP
           class-1.txt 296 Ytl 298
                           Y+ 
  ENSGMOP00000004756.1 292 YSS 294
                           *75 PP
Protein Sequence
(Fasta)		VSADSRGLPV VHHSRYVCDL PPGHRFPMGK FPRVLHCLLK DQIVSEQQVW TPELVSEEVL 60
NCVHTTEYVK NFVSGKVEEK AQRRTGFPWS KGLVRRCRYE TGGTLLAAEV ALERGMACST 120
AGGTHHAFPD RGSGFCLIND LAVTARYLRN SSSCPSSSSI AGGRKVLIVD LDVHQGDGTA 180
FIFKDEPGVF TFSIHGEKNF PLHKQRSDLD VSLPDGTEDR QYLSTVEEHL PGLLDSFRPD 240
LVLYDAGVDP HTEDDLGRLR LTDAGLYQRD LYVLKTVVAR GIPIATVIGG GYSSDVDKLA 300
VRHSIVHRAA TQ 312
Nucleotide Sequence
(Fasta)		GTGAGTGCTG ATTCCAGGGG ACTTCCAGTG GTTCACCACA GCAGGTATGT GTGTGACCTC 60
CCACCTGGCC ACAGGTTCCC GATGGGAAAG TTTCCCCGGG TCCTGCACTG CCTCCTCAAA 120
GACCAAATCG TCTCAGAACA GCAGGTTTGG ACACCTGAGC TAGTATCTGA GGAAGTACTG 180
AACTGTGTAC ATACTACGGA ATACGTGAAG AACTTTGTAA GCGGTAAGGT AGAAGAGAAA 240
GCCCAGAGAC GAACCGGGTT TCCCTGGAGC AAAGGACTAG TGAGACGCTG TCGCTATGAG 300
ACCGGCGGTA CGTTGCTGGC GGCGGAGGTG GCTTTGGAGC GTGGCATGGC CTGCAGCACG 360
GCTGGGGGGA CGCACCACGC CTTCCCGGAC CGTGGCTCAG GGTTCTGTCT GATCAACGAC 420
CTAGCGGTCA CCGCACGGTA CCTGAGGAAC TCCTCTTCAT GCCCCTCCTC CTCCTCTATC 480
GCCGGCGGTA GGAAGGTGCT CATCGTGGAC CTGGATGTCC ATCAGGGCGA TGGCACTGCG 540
TTTATTTTTA AAGATGAGCC AGGGGTTTTC ACGTTTTCAA TTCATGGCGA GAAAAACTTT 600
CCCCTGCATA AACAACGGAG CGACCTGGAT GTCAGTCTGC CAGACGGAAC GGAAGACAGG 660
CAGTATCTCT CCACAGTTGA GGAACACCTA CCTGGGCTGT TGGACTCGTT TCGCCCCGAC 720
CTGGTGCTGT ACGACGCCGG CGTCGACCCC CACACTGAGG ACGACCTGGG AAGACTCAGA 780
CTCACCGACG CAGGGTTGTA TCAGCGCGAT CTTTATGTTC TGAAGACTGT GGTGGCAAGA 840
GGCATTCCCA TAGCCACCGT CATAGGCGGT GGCTATTCCA GCGATGTCGA CAAGTTAGCC 900
GTCAGACACT CCATCGTGCA CAGAGCAGCG ACACAG 937
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xim-0076 ENSXMAP00000007002.1 Xiphophorus maculatus 74 2e-139 492
WERAM-Pof-0016 ENSPFOP00000001444.2 Poecilia formosa 73 1e-136 483
WERAM-Gaa-0118 ENSGACP00000015262.1 Gasterosteus aculeatus 72 2e-136 482
WERAM-Leo-0077 ENSLOCP00000010093.1 Lepisosteus oculatus 68 2e-124 442
WERAM-Lac-0085 ENSLACP00000010878.1 Latimeria chalumnae 65 3e-120 428
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 63 1e-108 390
WERAM-Dar-0212 ENSDARP00000129931.1 Danio rerio 73 5e-86 315
WERAM-Chr-0005 EDP03778 Chlamydomonas reinhardtii 52 1e-76 283
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 47 2e-69 259
WERAM-Orla-0034 ENSORLP00000004746.1 Oryzias latipes 70 5e-61 231
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 42 8e-58 221
WERAM-Php-0087 PP1S34_438V6.1 Physcomitrella patens 41 2e-54 209
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 32 4e-37 152
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 32 1e-36 150
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 32 1e-36 150
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 32 1e-36 150
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 32 2e-36 150
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 32 2e-36 150
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 32 2e-36 150
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 32 4e-36 149
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 31 6e-36 148
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 31 1e-35 147
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 33 1e-35 147
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 32 1e-35 147
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 31 1e-35 147
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 32 1e-35 147
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 32 2e-35 147
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 31 2e-35 147
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 32 2e-35 146
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 30 2e-35 146
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 31 3e-35 146
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 31 6e-35 145
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 31 7e-35 145
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 32 8e-35 144
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 32 8e-35 144
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 31 1e-34 144
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 31 1e-34 144
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 31 1e-34 144
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 32 2e-34 144
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 31 2e-34 143
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 31 3e-34 143
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 31 5e-34 142
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 31 6e-34 142
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 32 1e-33 140
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 32 1e-33 140
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 30 3e-33 139
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 31 7e-33 138
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 32 3e-32 136
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 32 6e-32 135
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 30 2e-31 133
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 31 3e-31 133
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 29 4e-31 132
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 34 8e-31 131
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 29 1e-30 130
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 30 1e-29 127
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 34 1e-29 127
WERAM-Sei-0028 Si006784m Setaria italica 29 5e-29 125
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 29 6e-29 125
WERAM-Met-0014 AES59273 Medicago truncatula 29 7e-29 125
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 30 2e-28 123
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 32 4e-28 122
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 28 4e-28 122
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 30 5e-28 122
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 30 6e-28 122
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 28 7e-28 121
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 28 9e-28 121
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 29 1e-27 121
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 30 1e-27 120
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 29 2e-27 120
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 27 2e-27 120
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 29 3e-27 119
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 30 3e-27 119
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 28 3e-27 119
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 28 4e-27 119
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 28 4e-27 119
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 28 4e-27 119
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 28 4e-27 119
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 28 4e-27 119
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 28 4e-27 119
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 33 7e-27 118
WERAM-Tra-0289 Traes_7AL_CE76BC38A.2 Triticum aestivum 30 1e-26 117
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 28 1e-26 117
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 29 1e-26 117
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 29 2e-26 117
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 36 2e-26 116
WERAM-Thc-0103 EOY29884 Theobroma cacao 27 5e-26 115
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 28 5e-25 112
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 28 5e-24 108
WERAM-Aet-0055 EMT26973 Aegilops tauschii 29 9e-24 108
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 31 7e-23 105
WERAM-Prp-0064 EMJ26901 Prunus persica 28 8e-23 105
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 25 3e-19 93.2
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 28 1e-18 91.3
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 30 3e-18 89.7
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 33 4e-18 89.4
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 29 1e-17 88.2
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 28 2e-17 87.0
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 27 2e-17 87.0
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 26 2e-17 86.7
WERAM-Lab-0007 EDR12637 Laccaria bicolor 29 7e-17 85.5
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 35 1e-16 84.7
WERAM-Scs-0017 EDO01763 Sclerotinia sclerotiorum 28 2e-16 83.6
WERAM-Kop-0017 CAY69921 Komagataella pastoris 25 2e-16 83.6
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 27 3e-16 83.2
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 28 3e-16 83.2
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 28 3e-16 82.8
WERAM-Cag-0003 CAG57932 Candida glabrata 28 5e-16 82.4
WERAM-Lem-0025 CBX91242 Leptosphaeria maculans 28 5e-16 82.4
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 28 5e-16 82.4
WERAM-Usm-0003 UM00661P0 Ustilago maydis 26 5e-16 82.4
WERAM-Miv-0036 MVLG_05319T0 Microbotryum violaceum 28 6e-16 82.0
WERAM-Coi-0024 EAS33504 Coccidioides immitis 28 6e-16 82.0
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 28 7e-16 82.0
Created Date 25-Jun-2016