WERAM Information

Tag Content
WERAM ID WERAM-Gaa-0118
Ensembl Protein ID ENSGACP00000015262.1
Gene Name hdac12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000011521.1 ENSGACT00000015291.1 ENSGACP00000015262.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 3.10e-27 96.4 59 312
Organism Gasterosteus aculeatus
Domain Profile
  HDAC Class-I
           class-1.txt  28 sltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkL 116
                           +++h+L+ +  ++ + ++  p+ as + l  +h+eey++ +   +++++e+           +  P  +g+   c+  tG+++ aa+  
  ENSGACP00000015262.1  59 RVLHHLIKDQVIT-EKQVWLPEIASEDLLRCVHTEEYLNNFIGGKTNEQEQRR---------TGFPWSEGIVRRCRYETGGTVLAAEAA 137
                           5667777665444.447778888888888888888888755444333333222.........356999***************999864 PP
           class-1.txt 117 nkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtG 202
                              ++ +a   aGG hha+ s  sGfc +nD+ +a   l+    + ++vl +d+d+h GDg    f++   v+t s+h  ++  fP   
  ENSGACP00000015262.1 138 --LQRGLACSTAGGTHHAFPSYGSGFCLLNDLAVAARYLMGnssTKRKVLIVDLDVHQGDGTAFIFQEEPDVFTFSVHCGKN--FPVR- 221
                           ..4678999**************************9999864436789******************************9888..9964. PP
           class-1.txt 203 dlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae....cvkfvksfnlp 287
                                 ++++    ++v ++dg++D++y + ++  +  ++e+f+P+ v+ + G D    D lg   l+ +g+ +    ++k v s  +p
  ENSGACP00000015262.1 222 ------KQQS---DLDVSVEDGLEDKEYLSTVEAHLPWLLETFRPDLVLYDAGVDPHRDDELGRLRLTDRGLYQrdlyVMKSVVSRGVP 301
                           ......3333...478999****************************************************9765344455555669** PP
           class-1.txt 288 llvlGGGGYtl 298
                           l  + GGGY+ 
  ENSGACP00000015262.1 302 LAAVIGGGYSR 312
                           *********75 PP
Protein Sequence
(Fasta)		MTCAVISTRL GVKVASAACR CFHTEPVRHE SSALPIVHHS KYVCDLPPNH RFPMAKFPRV 60
LHHLIKDQVI TEKQVWLPEI ASEDLLRCVH TEEYLNNFIG GKTNEQEQRR TGFPWSEGIV 120
RRCRYETGGT VLAAEAALQR GLACSTAGGT HHAFPSYGSG FCLLNDLAVA ARYLMGNSST 180
KRKVLIVDLD VHQGDGTAFI FQEEPDVFTF SVHCGKNFPV RKQQSDLDVS VEDGLEDKEY 240
LSTVEAHLPW LLETFRPDLV LYDAGVDPHR DDELGRLRLT DRGLYQRDLY VMKSVVSRGV 300
PLAAVIGGGY SRDIDVLAAR HSIVHRAATQ VWRECGIY 338
Nucleotide Sequence
(Fasta)		GACGTCAGTG ACAGCGATGA CCTGCGCTGT AATTTCTACG AGACTCGGCG TTAAAGTCGC 60
TTCGGCCGCC TGCAGATGTT TCCACACTGA ACCAGTCCGA CACGAGTCCA GCGCACTTCC 120
GATAGTTCAT CACAGCAAGT ATGTGTGCGA CCTGCCTCCC AACCACAGGT TCCCCATGGC 180
CAAGTTCCCC CGGGTTCTGC ATCATTTAAT CAAAGATCAG GTCATTACAG AGAAACAGGT 240
GTGGCTCCCT GAAATCGCCT CTGAAGACTT ACTCCGCTGT GTGCACACTG AGGAATACCT 300
CAACAACTTC ATAGGTGGGA AAACGAATGA GCAAGAACAA AGGAGGACAG GTTTTCCCTG 360
GAGTGAAGGT ATAGTGAGAC GCTGTCGGTA TGAAACAGGT GGGACTGTCC TGGCTGCTGA 420
AGCTGCTCTG CAGAGGGGTC TGGCCTGCAG CACGGCAGGA GGGACCCATC ATGCGTTTCC 480
CAGCTACGGT TCAGGGTTTT GTCTCCTCAA TGACTTGGCG GTTGCGGCCA GATACCTGAT 540
GGGCAACTCC TCCACCAAAA GGAAGGTTCT GATTGTGGAT CTAGATGTGC ATCAGGGCGA 600
CGGCACTGCG TTCATCTTTC AAGAGGAGCC GGATGTGTTT ACGTTTTCTG TGCATTGTGG 660
GAAAAACTTC CCCGTCCGTA AACAACAGAG TGACCTCGAC GTCAGCGTGG AGGATGGGCT 720
GGAGGACAAG GAGTACCTCT CCACAGTGGA GGCCCACCTC CCTTGGCTGC TGGAGACCTT 780
CCGTCCAGAC CTGGTCCTGT ACGACGCGGG CGTCGACCCC CATCGGGACG ATGAACTGGG 840
GCGGCTCCGG CTCACTGACC GAGGGCTGTA TCAGAGAGAT CTGTACGTGA TGAAGAGCGT 900
GGTGAGTAGA GGTGTTCCTC TGGCCGCCGT CATCGGAGGA GGATACTCGA GAGACATCGA 960
CGTCCTGGCC GCCAGACACT CCATCGTTCA CAGAGCAGCA ACTCAGGTGT GGAGGGAATG 1020
TGGAATATAC 1031
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0016 ENSPFOP00000001444.2 Poecilia formosa 84 1e-169 593
WERAM-Xim-0076 ENSXMAP00000007002.1 Xiphophorus maculatus 85 8e-168 586
WERAM-Leo-0077 ENSLOCP00000010093.1 Lepisosteus oculatus 73 8e-138 487
WERAM-Gam-0043 ENSGMOP00000004756.1 Gadus morhua 72 2e-136 482
WERAM-Lac-0085 ENSLACP00000010878.1 Latimeria chalumnae 72 9e-135 477
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 74 3e-126 448
WERAM-Dar-0212 ENSDARP00000129931.1 Danio rerio 77 2e-95 346
WERAM-Orla-0034 ENSORLP00000004746.1 Oryzias latipes 83 2e-76 283
WERAM-Chr-0005 EDP03778 Chlamydomonas reinhardtii 51 5e-75 278
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 46 1e-70 264
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 40 8e-61 231
WERAM-Php-0087 PP1S34_438V6.1 Physcomitrella patens 40 1e-56 217
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 33 7e-36 148
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 33 2e-35 147
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 31 3e-35 146
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 31 3e-35 146
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 33 8e-35 145
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 31 1e-34 144
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 30 1e-34 144
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 33 2e-34 143
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 31 2e-34 143
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 30 3e-34 143
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 32 3e-34 143
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 32 4e-34 142
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 32 4e-34 142
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 32 4e-34 142
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 32 4e-34 142
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 34 5e-34 142
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 31 8e-34 141
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 32 8e-34 141
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 31 9e-34 141
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 32 9e-34 141
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 32 2e-33 140
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 32 2e-33 140
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 32 3e-33 140
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 32 3e-33 139
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 32 3e-33 139
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 32 3e-33 139
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 30 3e-33 139
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 31 4e-33 139
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 31 4e-33 139
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 32 5e-33 139
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 31 5e-33 139
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 32 6e-33 139
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 32 8e-33 138
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 32 1e-32 137
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 32 1e-32 137
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 31 1e-32 137
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 31 1e-32 137
WERAM-Sei-0028 Si006784m Setaria italica 31 7e-32 135
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 31 7e-32 135
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 31 1e-31 134
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 28 1e-31 134
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 29 8e-31 131
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 29 1e-30 131
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 29 1e-30 131
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 28 1e-30 130
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 31 2e-30 130
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 31 2e-30 130
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 29 2e-30 130
WERAM-Met-0014 AES59273 Medicago truncatula 29 2e-30 130
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 29 2e-30 130
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 29 2e-30 130
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 29 2e-30 130
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 29 2e-30 130
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 29 2e-30 130
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 30 2e-30 130
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 29 3e-30 130
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 32 3e-30 129
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 30 4e-30 129
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 30 5e-30 129
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 29 5e-30 129
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 29 6e-30 129
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 34 2e-29 127
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 36 3e-29 126
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 32 3e-29 126
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 28 7e-29 125
WERAM-Thc-0103 EOY29884 Theobroma cacao 29 1e-28 124
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 29 3e-28 123
WERAM-Tra-0289 Traes_7AL_CE76BC38A.2 Triticum aestivum 29 4e-28 122
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 29 6e-28 122
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 29 1e-27 121
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 30 2e-27 120
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 29 3e-27 119
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 34 5e-27 119
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 31 1e-25 114
WERAM-Prp-0064 EMJ26901 Prunus persica 29 6e-25 112
WERAM-Aet-0055 EMT26973 Aegilops tauschii 29 7e-25 112
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 35 1e-24 111
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 28 1e-24 111
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 30 4e-24 109
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 30 4e-24 109
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 31 1e-22 104
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 32 2e-22 104
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 29 3e-22 103
WERAM-Lab-0007 EDR12637 Laccaria bicolor 30 3e-22 103
WERAM-Amt-0082 ERN02510 Amborella trichopoda 31 4e-22 102
WERAM-Kop-0017 CAY69921 Komagataella pastoris 28 5e-22 102
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 30 2e-21 100
WERAM-Coi-0024 EAS33504 Coccidioides immitis 31 2e-21 100
WERAM-Asg-0034 AAS54885 Ashbya gossypii 30 4e-21 99.8
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 31 4e-21 99.4
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 31 4e-21 99.4
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 31 8e-21 98.6
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 30 9e-21 98.2
WERAM-Caa-0035 KGT64372 Candida albicans 30 1e-20 97.8
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 30 1e-20 97.8
WERAM-Cag-0003 CAG57932 Candida glabrata 30 2e-20 97.4
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 30 2e-20 97.1
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 31 4e-20 96.3
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 30 5e-20 95.9
WERAM-Lem-0025 CBX91242 Leptosphaeria maculans 28 5e-20 95.9
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 26 8e-20 95.1
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 31 9e-20 95.1
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 31 9e-20 95.1
WERAM-Usm-0008 UM01352P0 Ustilago maydis 30 2e-19 94.0
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 30 2e-19 94.0
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 30 3e-19 93.6
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 31 4e-19 93.2
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 31 4e-19 93.2
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 30 5e-19 92.8
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 29 8e-19 92.0
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 31 8e-19 92.0
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 31 8e-19 92.0
WERAM-Pug-0012 EFP80528 Puccinia graminis 27 1e-18 91.7
Created Date 25-Jun-2016