| Tag |
Content |
| WERAM ID |
WERAM-Dio-0089 |
| Ensembl Protein ID |
ENSDORP00000009107.1 |
| Gene Name |
Hdac11 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-IV |
8.00e-166 |
550.2 |
30 |
316 |
| HDAC |
Class-I |
2.30e-25 |
89.5 |
25 |
309 |
|
| Organism |
Dipodomys ordii |
| Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89
leklhpfda+kw+kvi+flkeekll d++lveareas+edllvvhtr+yl++lk+s++vatiteip+v+flpnflvqrkvlrplr+q+g
ENSDORP00000009107.1 30 LEKLHPFDAGKWGKVINFLKEEKLLADSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTG 118
79*************************************************************************************** PP
class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178
Gti+a+klaverGwainvGGGfhhcss+rGGGfcayaditlaikflfer+++is+++iidldahqGnGherdf++d+rvyi+dvynr+i
ENSDORP00000009107.1 119 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISKATIIDLDAHQGNGHERDFMGDRRVYIMDVYNRHI 207
***************************************************************************************** PP
class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267
yp+dr akeairrkvele+gted+eyl+k+ r+++k+lqe+ pd+vvynaGtd+leGdrlG+l+isp givkrde+vfr+vr +ipi+
ENSDORP00000009107.1 208 YPGDRLAKEAIRRKVELEWGTEDQEYLSKVGRNIEKALQEHLPDVVVYNAGTDILEGDRLGGLSISPGGIVKRDELVFRVVRGLQIPIL 296
***************************************************************************************** PP
class-4.txt 268 mvtsGGyqkrsarviadsil 287
mvtsGGyqkr+ar+iadsil
ENSDORP00000009107.1 297 MVTSGGYQKRTARIIADSIL 316
******************95 PP
HDAC Class-I
class-1.txt 11 vgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflk.kvepenaeelskelkkfnvgedcPvfdgl 98
++ + ++ hp ++ + +++ + +l + +v++++as e+ll +h+ y++ lk + + + +e++ + + v ++
ENSDORP00000009107.1 25 ITFMGLEKLHPFDAGKWGKVINFLKEEKLLADSMLVEAREASEEDLLVVHTRRYLNELKwSFAVATITEIPPVIFLP----NFLVQRKV 109
555556677888888998899999999999999999999*************9999998244556666666544333....34455566 PP
class-1.txt 99 feycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdr 184
++ tG+++ a kL e+ ain GG+hh ++ Gfc Di lai l ++ + id+d h G+g e f r
ENSDORP00000009107.1 110 LRPLRTQTGGTIMAG-KLA-VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFErveGISKATIIDLDAHQGNGHERDFMGDRR 196
6667899*****876.554.45789*****************************99987222456889********************* PP
class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikg 273
v + + y+ + +Pg ++ + v l+ g +D++y + + + i+k ++ + P++vv + G+D l gDrlg ++s g
ENSDORP00000009107.1 197 VYIMDV--YNRHIYPGDRLAKEAI-RR------KVELEWGTEDQEYLSKVGRNIEKALQEHLPDVVVYNAGTDILEGDRLGGLSISPGG 276
*98765..88889**975444443.33......379***********999999*********************************999 PP
class-1.txt 274 hae....cvkfvksfnlpllvlGGGGYtlrnvaR 303
+ + + ++v+ ++p+l++ GGY++r aR
ENSDORP00000009107.1 277 IVKrdelVFRVVRGLQIPILMVTSGGYQKRT-AR 309
87656667899****************9874.45 PP
|
Protein Sequence
(Fasta) | PHVTQLYQHV SEKRWPIVYS PRYNITFMGL EKLHPFDAGK WGKVINFLKE EKLLADSMLV 60
EAREASEEDL LVVHTRRYLN ELKWSFAVAT ITEIPPVIFL PNFLVQRKVL RPLRTQTGGT 120
IMAGKLAVER GWAINVGGGF HHCSSDRGGG FCAYADITLA IKFLFERVEG ISKATIIDLD 180
AHQGNGHERD FMGDRRVYIM DVYNRHIYPG DRLAKEAIRR KVELEWGTED QEYLSKVGRN 240
IEKALQEHLP DVVVYNAGTD ILEGDRLGGL SISPGGIVKR DELVFRVVRG LQIPILMVTS 300
GGYQKRTARI IADSILNLHD LGLIGPESPS VSAQSSDTPL LPRTVP 346Protein Fasta Sequence
>ENSDORP00000009107.1|Class-I|Dipodomys ordii
PHVTQLYQHVSEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLADSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISKATIIDLDAHQGNGHERDFMGDRRVYIMDVYNRHIYPGDRLAKEAIRRKVELEWGTEDQEYLSKVGRNIEKALQEHLPDVVVYNAGTDILEGDRLGGLSISPGGIVKRDELVFRVVRGLQIPILMVTSGGYQKRTARIIADSILNLHDLGLIGPESPSVSAQSSDTPLLPRTVP |
Nucleotide Sequence
(Fasta) | CCACACGTGA CCCAGCTGTA CCAGCATGTG TCAGAAAAGC GCTGGCCCAT CGTGTACTCG 60
CCTCGCTACA ACATCACCTT CATGGGCCTG GAGAAGCTGC ACCCCTTCGA CGCTGGAAAA 120
TGGGGCAAGG TGATCAATTT CCTAAAAGAG GAGAAGCTCC TGGCGGACAG CATGCTGGTG 180
GAGGCGCGGG AGGCGTCGGA GGAGGACCTG CTGGTGGTGC ATACAAGGCG CTATCTCAAT 240
GAGCTGAAGT GGTCCTTTGC GGTTGCCACC ATCACTGAAA TCCCCCCTGT CATCTTCCTT 300
CCCAACTTCC TCGTGCAGAG GAAGGTGCTG AGACCCCTGC GGACCCAGAC GGGAGGAACC 360
ATAATGGCAG GGAAGCTGGC TGTGGAGCGA GGCTGGGCCA TCAACGTAGG GGGCGGCTTC 420
CACCACTGCT CCAGCGACCG CGGCGGCGGC TTCTGTGCCT ATGCTGACAT CACGCTTGCC 480
ATCAAGTTTC TGTTTGAACG GGTGGAGGGC ATCTCCAAGG CCACCATCAT TGACCTGGAT 540
GCACATCAGG GCAACGGGCA TGAGCGAGAC TTCATGGGTG ACAGGCGCGT GTATATCATG 600
GATGTCTACA ACCGCCACAT CTACCCTGGG GACCGCTTGG CCAAAGAGGC CATCCGGAGG 660
AAGGTGGAGT TGGAGTGGGG CACAGAGGAC CAGGAGTACC TGAGCAAAGT GGGGAGGAAC 720
ATAGAGAAGG CGCTCCAGGA GCACCTGCCC GACGTGGTGG TGTACAACGC TGGCACCGAC 780
ATCCTCGAGG GGGACCGCCT CGGGGGGCTG TCCATCAGCC CAGGGGGCAT TGTGAAGAGG 840
GACGAGCTGG TGTTCCGCGT GGTCCGAGGC CTCCAGATTC CCATCCTCAT GGTGACTTCA 900
GGCGGGTACC AGAAACGCAC GGCCAGAATC ATCGCTGACT CCATCCTGAA TCTGCACGAC 960
CTGGGCCTCA TCGGGCCCGA GTCTCCCAGC GTCTCAGCAC AGAGCTCAGA CACGCCGCTG 1020
CTTCCCCGCA CTGTGCCCTG A
1042Nucleotide Fasta Sequence
>ENSDORP00000009107.1|Class-I|Dipodomys ordii
CCACACGTGACCCAGCTGTACCAGCATGTGTCAGAAAAGCGCTGGCCCATCGTGTACTCGCCTCGCTACAACATCACCTTCATGGGCCTGGAGAAGCTGCACCCCTTCGACGCTGGAAAATGGGGCAAGGTGATCAATTTCCTAAAAGAGGAGAAGCTCCTGGCGGACAGCATGCTGGTGGAGGCGCGGGAGGCGTCGGAGGAGGACCTGCTGGTGGTGCATACAAGGCGCTATCTCAATGAGCTGAAGTGGTCCTTTGCGGTTGCCACCATCACTGAAATCCCCCCTGTCATCTTCCTTCCCAACTTCCTCGTGCAGAGGAAGGTGCTGAGACCCCTGCGGACCCAGACGGGAGGAACCATAATGGCAGGGAAGCTGGCTGTGGAGCGAGGCTGGGCCATCAACGTAGGGGGCGGCTTCCACCACTGCTCCAGCGACCGCGGCGGCGGCTTCTGTGCCTATGCTGACATCACGCTTGCCATCAAGTTTCTGTTTGAACGGGTGGAGGGCATCTCCAAGGCCACCATCATTGACCTGGATGCACATCAGGGCAACGGGCATGAGCGAGACTTCATGGGTGACAGGCGCGTGTATATCATGGATGTCTACAACCGCCACATCTACCCTGGGGACCGCTTGGCCAAAGAGGCCATCCGGAGGAAGGTGGAGTTGGAGTGGGGCACAGAGGACCAGGAGTACCTGAGCAAAGTGGGGAGGAACATAGAGAAGGCGCTCCAGGAGCACCTGCCCGACGTGGTGGTGTACAACGCTGGCACCGACATCCTCGAGGGGGACCGCCTCGGGGGGCTGTCCATCAGCCCAGGGGGCATTGTGAAGAGGGACGAGCTGGTGTTCCGCGTGGTCCGAGGCCTCCAGATTCCCATCCTCATGGTGACTTCAGGCGGGTACCAGAAACGCACGGCCAGAATCATCGCTGACTCCATCCTGAATCTGCACGACCTGGGCCTCATCGGGCCCGAGTCTCCCAGCGTCTCAGCACAGAGCTCAGACACGCCGCTGCTTCCCCGCACTGTGCCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
