| Tag |
Content |
| WERAM ID |
WERAM-Chr-0007 |
| Ensembl Protein ID |
EDP00102 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
8.90e-17 |
61.1 |
34 |
304 |
|
| Organism |
Chlamydomonas reinhardtii |
| Domain Profile |
HDAC Class-I
class-1.txt 39 lskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakk 136
+ + ++v+p++a+ e l+ +h+ +y++ +++ + + + +el+ ++ + + + ++ G+++ a+ e+ a+n GG+hha
EDP00102 34 VLGDAQLVTPREATPEMLSDVHTADYLHRIHNHNFTVVQV--TELAALAMLPNKLLQWRVVAPMRMHVGGTMLALGL--ALERGWAVNIGGGMHHASA 127
5566789999999999999999999998888776655543..35777777777777777888888888888766543..3356789************ PP
class-1.txt 137 seasGfcyvnDivlailellk....khkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesy 230
++ G+c +Di+l+ +vl id+d h G+gve ++ + y+ + fP d a+ g + v lk g +D+ y
EDP00102 128 DRGMGWCPFDDIMLGAAAAGDgagaGGLKVLVIDLDAHQGNGVERLALGDGQLYIL--DMYNAGVFPR-----DDEAKAG--IDIRVELKSGTEDDVY 216
***************99887632224569***************988888887765..5678888**5.....5555666..6699*******99999 PP
class-1.txt 231 ekifksviskv.ieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.....nlpllvlGGGGYtlrnvaRcwtyetavv 312
+ ++ +++ + +P+ vv + G+D lagD+lg +s g e ++v ++ ++p+ +l GGY++ a + + +t ++
EDP00102 217 LNRLRAALERAaLVLPRPDLVVYNAGTDVLAGDPLGRLGVSHAGVVERDELVWRWcrdvaRAPIAMLLSGGYAKDSAAVITASLTNLI 304
88777777765156779***************************9986666655544337899***********99999888888876 PP
|
Protein Sequence
(Fasta) | PQYNISFFGI EKLHPFDAGK FAKVVKALKR DGVVLGDAQL VTPREATPEM LSDVHTADYL 60
HRIHNHNFTV VQVTELAALA MLPNKLLQWR VVAPMRMHVG GTMLALGLAL ERGWAVNIGG 120
GMHHASADRG MGWCPFDDIM LGAAAAGDGA GAGGLKVLVI DLDAHQGNGV ERLALGDGQL 180
YILDMYNAGV FPRDDEAKAG IDIRVELKSG TEDDVYLNRL RAALERAALV LPRPDLVVYN 240
AGTDVLAGDP LGRLGVSHAG VVERDELVWR WCRDVARAPI AMLLSGGYAK DSAAVITASL 300
TNLINKFDLK S 311Protein Fasta Sequence
>EDP00102|Class-I|Chlamydomonas reinhardtii
PQYNISFFGIEKLHPFDAGKFAKVVKALKRDGVVLGDAQLVTPREATPEMLSDVHTADYLHRIHNHNFTVVQVTELAALAMLPNKLLQWRVVAPMRMHVGGTMLALGLALERGWAVNIGGGMHHASADRGMGWCPFDDIMLGAAAAGDGAGAGGLKVLVIDLDAHQGNGVERLALGDGQLYILDMYNAGVFPRDDEAKAGIDIRVELKSGTEDDVYLNRLRAALERAALVLPRPDLVVYNAGTDVLAGDPLGRLGVSHAGVVERDELVWRWCRDVARAPIAMLLSGGYAKDSAAVITASLTNLINKFDLKS |
Nucleotide Sequence
(Fasta) | CCCCAGTACA ACATATCATT CTTCGGCATT GAGAAGCTGC ACCCCTTCGA CGCCGGCAAA 60
TTCGCTAAGG TGGTTAAGGC CCTGAAGAGG GACGGCGTGG TGCTCGGCGA TGCGCAGCTG 120
GTGACGCCGC GGGAGGCCAC GCCCGAGATG CTGTCTGACG TACACACGGC CGACTACCTG 180
CACCGCATAC ACAACCACAA CTTCACGGTG GTGCAGGTGA CGGAGCTGGC GGCACTGGCC 240
ATGCTGCCCA ACAAGCTGCT GCAGTGGCGC GTGGTGGCGC CCATGAGGAT GCATGTGGGC 300
GGCACCATGC TGGCCCTGGG TCTGGCTCTG GAGCGCGGTT GGGCGGTCAA CATTGGCGGC 360
GGCATGCACC ACGCCTCCGC CGACAGAGGC ATGGGCTGGT GCCCCTTCGA CGACATTATG 420
CTGGGCGCTG CGGCTGCAGG TGACGGTGCT GGTGCAGGCG GGCTCAAAGT GTTGGTGATC 480
GACCTGGACG CACACCAGGG CAACGGCGTG GAGCGACTGG CCCTGGGTGA CGGGCAGCTG 540
TACATCCTGG ACATGTACAA CGCCGGCGTG TTCCCGCGTG ATGACGAGGC CAAGGCCGGC 600
ATAGACATCC GTGTGGAGCT TAAGAGCGGC ACGGAGGACG ACGTCTACCT CAACAGGCTG 660
CGGGCGGCGC TGGAGAGGGC GGCGCTGGTG CTGCCGCGGC CGGACCTGGT GGTGTACAAC 720
GCCGGCACGG ACGTGTTGGC AGGCGACCCG CTGGGGCGGC TGGGCGTCAG CCACGCGGGC 780
GTGGTGGAGC GAGACGAGCT GGTGTGGCGC TGGTGTCGTG ACGTGGCACG GGCACCCATT 840
GCCATGCTGC TGAGTGGCGG CTATGCCAAG GACAGCGCCG CAGTCATCAC CGCCTCACTC 900
ACCAACCTAA TCAACAAGTT CGACCTGAAG TCCTGA
937Nucleotide Fasta Sequence
>EDP00102|Class-I|Chlamydomonas reinhardtii
CCCCAGTACAACATATCATTCTTCGGCATTGAGAAGCTGCACCCCTTCGACGCCGGCAAATTCGCTAAGGTGGTTAAGGCCCTGAAGAGGGACGGCGTGGTGCTCGGCGATGCGCAGCTGGTGACGCCGCGGGAGGCCACGCCCGAGATGCTGTCTGACGTACACACGGCCGACTACCTGCACCGCATACACAACCACAACTTCACGGTGGTGCAGGTGACGGAGCTGGCGGCACTGGCCATGCTGCCCAACAAGCTGCTGCAGTGGCGCGTGGTGGCGCCCATGAGGATGCATGTGGGCGGCACCATGCTGGCCCTGGGTCTGGCTCTGGAGCGCGGTTGGGCGGTCAACATTGGCGGCGGCATGCACCACGCCTCCGCCGACAGAGGCATGGGCTGGTGCCCCTTCGACGACATTATGCTGGGCGCTGCGGCTGCAGGTGACGGTGCTGGTGCAGGCGGGCTCAAAGTGTTGGTGATCGACCTGGACGCACACCAGGGCAACGGCGTGGAGCGACTGGCCCTGGGTGACGGGCAGCTGTACATCCTGGACATGTACAACGCCGGCGTGTTCCCGCGTGATGACGAGGCCAAGGCCGGCATAGACATCCGTGTGGAGCTTAAGAGCGGCACGGAGGACGACGTCTACCTCAACAGGCTGCGGGCGGCGCTGGAGAGGGCGGCGCTGGTGCTGCCGCGGCCGGACCTGGTGGTGTACAACGCCGGCACGGACGTGTTGGCAGGCGACCCGCTGGGGCGGCTGGGCGTCAGCCACGCGGGCGTGGTGGAGCGAGACGAGCTGGTGTGGCGCTGGTGTCGTGACGTGGCACGGGCACCCATTGCCATGCTGCTGAGTGGCGGCTATGCCAAGGACAGCGCCGCAGTCATCACCGCCTCACTCACCAACCTAATCAACAAGTTCGACCTGAAGTCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
