WERAM Information

Tag Content
WERAM ID WERAM-Brr-0184
Ensembl Protein ID Bra036568.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra036568 Bra036568.1 Bra036568.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-12 48 202 252
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  Bra036568.1-P 202 TQCGACGESYAADEFWICCDLCENWFHGKCVKITPARAEHIKQYKCPSCSN 252
                    67********************************666664479******86 PP
Protein Sequence
(Fasta)		MDGGGAYNPR TVEEVFRDFK GRRSGMIKAL TSDVQEFYRL CDPEKENLCL YGRPDEHWEV 60
NLPAEEVPPE LPEPVLGINF ARDGMQEKDW LSLVAVHSDA WLLAVAFFFG ARFGFDKADR 120
KRLFNMMNDL PSIFEVVAGT AKKPSKEKSS VSNNSSNRSK SNSKRGSEPR PKLTKPEPKD 180
EEEEEEEGVE EEEDEDDEQG ETQCGACGES YAADEFWICC DLCENWFHGK CVKITPARAE 240
HIKQYKCPSC SNKRARS 257
Nucleotide Sequence
(Fasta)		ATGGACGGAG GTGGCGCGTA CAACCCACGC ACGGTGGAGG AGGTTTTCAG AGATTTCAAG 60
GGTCGTAGGA GTGGCATGAT TAAAGCTTTA ACCTCAGATG TTCAGGAGTT TTACCGACTT 120
TGTGATCCAG AAAAGGAGAA CTTGTGTCTC TATGGGCGCC CAGATGAGCA CTGGGAAGTG 180
AACTTACCAG CTGAAGAGGT TCCCCCTGAG CTCCCGGAGC CTGTCTTGGG CATCAACTTT 240
GCCCGAGACG GGATGCAGGA AAAGGACTGG TTGTCCCTTG TTGCTGTCCA CAGTGATGCA 300
TGGCTTCTTG CAGTTGCTTT CTTTTTCGGA GCCAGGTTTG GCTTTGACAA AGCTGATAGG 360
AAAAGGCTTT TCAATATGAT GAATGATCTT CCATCGATAT TTGAGGTTGT GGCTGGCACT 420
GCTAAGAAAC CATCCAAGGA GAAATCTTCT GTTTCCAACA ATAGTAGCAA CAGATCCAAA 480
TCAAACTCCA AGCGAGGATC AGAACCAAGG CCCAAGCTGA CAAAGCCTGA GCCCAAAGAT 540
GAGGAGGAGG AGGAAGAGGA AGGTGTGGAA GAAGAGGAGG ATGAGGATGA TGAGCAAGGG 600
GAAACACAGT GTGGGGCATG TGGTGAGAGC TATGCAGCTG ATGAGTTCTG GATCTGCTGT 660
GACCTCTGTG AGAACTGGTT CCATGGGAAG TGTGTGAAGA TAACACCAGC CAGGGCTGAG 720
CACATTAAGC AGTATAAGTG CCCATCTTGC AGCAACAAGA GAGCTCGGTC CTAA 775
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0167 Bo9g011050.1 Brassica oleracea 99 1e-99 359
WERAM-Art-0130 AT5G26210.1 Arabidopsis thaliana 89 4e-87 318
WERAM-Arl-0139 scaffold_602752.1 Arabidopsis lyrata 88 2e-86 315
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 79 8e-85 310
WERAM-Prp-0082 EMJ27202 Prunus persica 79 9e-83 303
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 81 3e-81 298
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 79 8e-80 293
WERAM-Thc-0105 EOY30333 Theobroma cacao 79 2e-79 292
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 74 5e-79 291
WERAM-Amt-0088 ERM99796 Amborella trichopoda 75 8e-78 287
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 70 9e-77 283
WERAM-Met-0172 KEH18446 Medicago truncatula 76 1e-76 283
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 69 1e-73 273
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 70 4e-73 271
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 68 8e-72 267
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 70 8e-70 260
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 70 8e-70 260
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 70 8e-70 260
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 70 8e-70 260
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 70 8e-70 260
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 70 8e-70 260
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 70 8e-70 260
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 70 8e-70 260
WERAM-Sei-0118 Si030765m Setaria italica 63 1e-69 260
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 66 1e-69 259
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 66 2e-69 259
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 66 2e-69 259
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 66 3e-69 258
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 63 3e-69 258
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 64 5e-69 258
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 64 7e-69 257
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 70 8e-69 257
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 3e-66 249
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 69 1e-59 226
Created Date 25-Jun-2016