WERAM Information

Tag Content
WERAM ID WERAM-Brr-0053
Ensembl Protein ID Bra009887.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra009887 Bra009887.1 Bra009887.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-12 48 206 256
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  Bra009887.1-P 206 TQCGACGESYAADEFWICCDLCENWFHGKCVKITPARAEHIKQYKCPSCSN 256
                    67********************************666664479******86 PP
Protein Sequence
(Fasta)		MDGGGDGGGA AYNPRTVEEV YRDFKGRRNG MIKALTTDVQ EFYRLCDPEK ENLCLYGHPN 60
EHWEVNLPAE EVPPELPEPV LGINFARDGM MEKDWLSLVA VHSDAWLLAV AFFFGARFGF 120
DKADRKRLFN MMNDLPSIFE VVAGTAKKAS KEKSSVSNNS SNRSKSNSKR GSEPKPKYSK 180
PEPKDEEEEE GVEEEDEDDD DEQGETQCGA CGESYAADEF WICCDLCENW FHGKCVKITP 240
ARAEHIKQYK CPSCSNKRAR S 261
Nucleotide Sequence
(Fasta)		ATGGACGGAG GTGGCGACGG TGGTGGTGCC GCGTACAACC CACGCACGGT GGAGGAGGTT 60
TATAGGGATT TTAAGGGTCG TAGGAATGGC ATGATTAAGG CTTTAACCAC TGATGTTCAG 120
GAGTTTTACC GACTTTGTGA TCCCGAAAAG GAGAACCTGT GCCTTTATGG TCACCCGAAT 180
GAGCACTGGG AAGTGAATCT ACCAGCTGAA GAGGTTCCCC CGGAGCTCCC GGAGCCTGTC 240
TTGGGTATCA ACTTTGCCAG AGACGGGATG ATGGAAAAGG ATTGGCTGTC CCTTGTTGCT 300
GTCCACAGTG ATGCATGGCT TCTTGCTGTT GCTTTCTTTT TCGGAGCCAG GTTTGGATTT 360
GACAAAGCTG ATAGGAAACG GCTGTTCAAT ATGATGAATG ACCTCCCATC AATATTTGAG 420
GTTGTGGCTG GCACTGCAAA GAAAGCGTCA AAGGAGAAAT CATCTGTTTC CAACAACAGC 480
AGCAACAGAT CCAAGTCAAA CTCCAAGAGA GGATCAGAAC CTAAGCCCAA ATACTCAAAG 540
CCAGAGCCCA AAGATGAAGA GGAAGAGGAA GGTGTGGAAG AGGAAGATGA GGATGATGAT 600
GATGAGCAAG GGGAAACACA GTGTGGGGCA TGTGGTGAGA GCTATGCCGC CGATGAGTTC 660
TGGATCTGCT GTGACCTCTG CGAGAACTGG TTCCATGGGA AGTGTGTGAA GATAACACCA 720
GCCAGAGCTG AGCACATCAA GCAGTACAAG TGCCCATCTT GCAGCAACAA GAGAGCTCGT 780
TCCTAA 787
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0131 Bo7g095410.1 Brassica oleracea 100 1e-88 323
WERAM-Arl-0139 scaffold_602752.1 Arabidopsis lyrata 90 6e-83 304
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 80 9e-80 293
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 78 6e-78 287
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 76 1e-77 286
WERAM-Prp-0082 EMJ27202 Prunus persica 77 2e-77 286
WERAM-Amt-0088 ERM99796 Amborella trichopoda 74 3e-76 282
WERAM-Thc-0077 EOY27191 Theobroma cacao 77 5e-76 281
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 73 2e-74 275
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 68 4e-74 275
WERAM-Met-0172 KEH18446 Medicago truncatula 73 2e-73 273
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 71 2e-72 269
WERAM-Sei-0118 Si030765m Setaria italica 63 3e-69 259
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 66 4e-69 258
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 66 2e-67 253
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 66 2e-67 253
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 66 2e-67 253
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 66 2e-67 253
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 66 2e-67 253
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 66 2e-67 253
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 66 2e-67 253
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 63 2e-67 253
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 66 2e-67 252
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 64 4e-67 251
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 65 6e-67 251
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 65 8e-67 250
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 64 9e-67 250
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 1e-66 250
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 65 1e-66 250
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 65 1e-66 249
WERAM-Aet-0106 EMT19247 Aegilops tauschii 65 2e-65 246
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 67 1e-64 243
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 64 4e-61 231
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 66 3e-58 222
Created Date 25-Jun-2016