WERAM Information

Tag Content
WERAM ID WERAM-Bro-0179
Ensembl Protein ID Bo9g151850.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo9g151850 Bo9g151850.1 Bo9g151850.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.60e-12 47.4 209 259
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   t+C +Cg++++ ++++++Cd C++wfH++Cvk++  +++  k++ CpsC +
  Bo9g151850.1 209 TLCGACGDNYAADEFWICCDMCEKWFHGTCVKITPARAEHIKHYKCPSCSN 259
                   78********99**********************666664479******86 PP
Protein Sequence
(Fasta)		MEGEGGGGGG AHYNPRTVEE VFRDFKGRRA AILRALTTDV QEFFQQCDPE KDNLCLYGFP 60
NEVWEVNLPA EEVPPELPEP ALGINFARDG MQEKDWLSLV AVHSDAWLLS VSFFFGSKFG 120
FDKVDRKRLF NMINEFPTIF EVVTGTAKNQ TKEKPSSANQ NGNRSKSNSK VRVLDGKSSK 180
TIQAMEEEGL EEEEEEKEKE EDEEEHGETL CGACGDNYAA DEFWICCDMC EKWFHGTCVK 240
ITPARAEHIK HYKCPSCSNK RARP 264
Nucleotide Sequence
(Fasta)		ATGGAAGGAG AAGGAGGAGG AGGAGGAGGT GCGCACTACA ACCCTCGAAC TGTTGAAGAA 60
GTCTTCCGAG ATTTCAAGGG CCGTCGAGCT GCCATCCTCC GAGCTCTCAC CACTGATGTG 120
CAAGAGTTTT TCCAGCAATG CGACCCTGAG AAGGACAATC TTTGCTTGTA TGGATTCCCG 180
AATGAAGTGT GGGAAGTTAA CTTACCAGCT GAAGAAGTAC CTCCGGAGCT CCCCGAACCT 240
GCACTCGGCA TCAACTTTGC CAGAGATGGA ATGCAAGAAA AAGACTGGCT TTCTCTCGTT 300
GCTGTCCACA GTGATGCCTG GTTACTCTCT GTCTCCTTTT TCTTCGGTTC AAAATTTGGT 360
TTTGATAAAG TTGACAGGAA GCGTTTGTTC AACATGATAA ATGAGTTTCC TACTATATTT 420
GAAGTTGTGA CTGGAACTGC GAAAAATCAA ACAAAGGAGA AGCCCTCTTC AGCAAATCAA 480
AATGGCAACA GATCCAAGTC AAATTCAAAA GTGAGAGTTT TAGATGGCAA AAGCTCAAAG 540
ACAATACAAG CCATGGAGGA AGAAGGACTA GAGGAAGAGG AAGAGGAGAA AGAAAAGGAA 600
GAGGATGAAG AGGAACATGG CGAAACACTG TGTGGAGCTT GTGGAGATAA CTATGCTGCT 660
GATGAATTCT GGATATGCTG TGACATGTGC GAGAAATGGT TCCATGGGAC ATGTGTGAAG 720
ATCACTCCAG CTAGAGCTGA GCATATCAAG CACTACAAGT GCCCTTCTTG CAGCAACAAA 780
AGAGCTCGAC CCTAA 796
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0011 Bra002307.1-P Brassica rapa 97 1e-107 386
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 89 3e-101 365
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 85 1e-96 350
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 79 4e-88 321
WERAM-Prp-0082 EMJ27202 Prunus persica 76 6e-86 314
WERAM-Thc-0077 EOY27191 Theobroma cacao 79 3e-83 305
WERAM-Amt-0032 ERN11177 Amborella trichopoda 75 9e-83 303
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 74 2e-82 302
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 78 2e-82 302
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 73 3e-82 302
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 72 3e-79 291
WERAM-Met-0013 KEH39913 Medicago truncatula 73 6e-79 291
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 70 1e-76 283
WERAM-Sei-0086 Si023009m Setaria italica 66 4e-76 281
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 66 1e-75 280
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 66 1e-74 276
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 67 2e-74 276
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 65 4e-74 275
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 66 1e-73 273
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 66 1e-73 273
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 66 2e-73 272
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 66 2e-73 272
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 66 2e-73 272
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 66 2e-73 272
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 66 2e-73 272
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 66 2e-73 272
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 66 2e-73 272
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 66 9e-73 270
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 65 3e-72 268
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 68 2e-71 266
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 2e-71 266
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 65 3e-70 262
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 65 3e-67 252
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 68 3e-64 242
Created Date 25-Jun-2016