WERAM Information

Tag Content
WERAM ID WERAM-Bro-0033
Ensembl Protein ID Bo2g079350.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo2g079350 Bo2g079350.1 Bo2g079350.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.90e-21 76.1 83 152
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   3 hevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                   h++ ++F+ pvd+    ++dY++i+k+PmdL t+k rl +  Y+sp+ef++Dvrl fnNa  yn+ +++v
  Bo2g079350.1  83 HKFGSIFNTPVDAVkSGLHDYHTIVKKPMDLGTVKTRLSKSWYESPLEFAEDVRLTFNNALLYNPVGHDV 152
                   78899***********************************************************999887 PP
Protein Sequence
(Fasta)		MASGAIAGGG VSKTKHKRSS KRLKPTTAAR LVSPSNSLGS DVNRQMMKIS LNSISKLEVR 60
NLKRKLTSDL EKVRNLINRL EPHKFGSIFN TPVDAVKSGL HDYHTIVKKP MDLGTVKTRL 120
SKSWYESPLE FAEDVRLTFN NALLYNPVGH DVHRMAELLL SMFEDQYESL NSRQQEPLPL 180
RAPTPSLSPS IVVEDKTLER ADSMTKPVEP LALTVSPEKR EEEEEEASGN RDLAFEEKPR 240
LSEDLQDLPF DKLEEVVEII KKTKPELAQQ DDEIELHIDS LDLETLWELY RFVTGYKESL 300
GNKKEEQGLS SEREAESVHN GVQEPVRANN
Nucleotide Sequence
(Fasta)		ATGGCGTCTG GTGCTATAGC CGGCGGTGGA GTTTCGAAGA CGAAGCATAA ACGGAGCAGC 60
AAAAGATTGA AACCCACGAC GGCGGCGAGG CTGGTGTCTC CGTCGAATTC ACTTGGGTCT 120
GACGTCAATC GTCAGATGAT GAAGATAAGT CTGAACTCAA TCTCAAAGCT TGAAGTTCGC 180
AACTTGAAGC GGAAACTAAC ATCCGATCTT GAAAAAGTTC GGAACTTGAT CAACCGCCTC 240
GAACCTCATA AGTTTGGGTC GATTTTCAAC ACGCCGGTTG ATGCGGTTAA GTCCGGTTTA 300
CATGATTATC ACACTATAGT TAAGAAGCCT ATGGATTTGG GTACAGTGAA GACTAGGTTG 360
AGTAAGAGTT GGTATGAGTC TCCCTTGGAG TTTGCTGAGG ATGTGAGGCT TACTTTTAAC 420
AACGCTTTGC TGTATAATCC CGTGGGGCAT GATGTCCATC GTATGGCTGA GTTGTTGTTG 480
AGCATGTTTG AAGACCAGTA TGAGTCTCTT AATAGTAGGC AACAAGAACC ATTACCATTA 540
CGAGCTCCTA CACCGTCTCT GTCTCCTTCT ATAGTGGTTG AAGATAAGAC TTTGGAGAGA 600
GCAGATTCTA TGACAAAGCC AGTGGAGCCT TTAGCTCTAA CCGTTTCCCC TGAGAAGCGT 660
GAAGAAGAAG AAGAGGAGGC GTCTGGGAAT AGGGACTTGG CGTTTGAGGA GAAGCCGAGG 720
CTTAGTGAAG ACCTTCAGGA TTTGCCTTTC GACAAGCTAG AGGAAGTTGT TGAGATTATA 780
AAGAAGACTA AGCCGGAGCT CGCTCAACAA GACGACGAGA TTGAGTTACA CATTGATAGT 840
CTTGACCTCG AAACGCTTTG GGAGCTTTAC AGATTCGTGA CAGGATATAA GGAGAGCTTG 900
GGTAACAAAA AAGAAGAACA GGGTTTGAGC TCTGAAAGAG AAGCTGAGTC TGTTCACAAC 960
GGTGTCCAAG AACCGGTGAG AGCAAATAAC TAA 994
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0041 Bra008074.1-P Brassica rapa 71 1e-129 459
WERAM-Arl-0033 fgenesh1_pm.C_scaffold_2001298 Arabidopsis lyrata 60 1e-116 416
WERAM-Art-0028 AT1G73150.1 Arabidopsis thaliana 57 1e-110 396
WERAM-Thc-0085 EOY13187 Theobroma cacao 46 3e-60 229
WERAM-Prp-0055 EMJ15030 Prunus persica 48 6e-60 228
WERAM-Mua-0024 GSMUA_Achr11P12260_001 Musa acuminata 45 7e-60 228
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 44 1e-59 227
WERAM-Glm-0069 GLYMA06G43650.2 Glycine max 46 6e-59 225
WERAM-Met-0054 KEH39252 Medicago truncatula 46 9e-59 224
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 48 3e-58 222
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 44 8e-58 221
WERAM-Tra-0112 Traes_3AS_C2CF6FBF5.3 Triticum aestivum 48 3e-57 219
WERAM-Aet-0058 EMT09500 Aegilops tauschii 49 5e-57 218
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 47 6e-57 218
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 47 6e-57 218
WERAM-Sei-0009 Si001167m Setaria italica 48 9e-57 218
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 49 2e-56 216
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 49 4e-56 216
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 49 4e-56 216
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 48 4e-56 215
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 49 4e-56 215
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 48 5e-56 215
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 48 6e-56 215
WERAM-Amt-0025 ERN13953 Amborella trichopoda 43 6e-56 214
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 46 7e-56 214
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 49 1e-55 214
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 49 1e-55 214
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 49 1e-55 214
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 39 9e-55 211
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 44 9e-55 211
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 51 1e-54 210
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 51 1e-53 207
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 43 5e-52 202
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 41 7e-49 191
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 34 5e-42 169
WERAM-Anp-0056 ENSAPLP00000006179.1 Anas platyrhynchos 34 2e-25 113
Created Date 25-Jun-2016