WERAM Information

Tag Content
WERAM ID WERAM-Bro-0027
Ensembl Protein ID Bo2g021880.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo2g021880 Bo2g021880.1 Bo2g021880.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.20e-12 47.3 243 292
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   t+C +C  d++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  Bo2g021880.1 243 TLCGAC-GDNYASDFWICCDMCEKWFHGKCVKITPARAEHIKQYKCPSCSN 292
                   78****.66666789*******************666664479******86 PP
Protein Sequence
(Fasta)		THLKPKRKRL LLLFFLFRKR HKLECRSFIV RKMEGGGGAR YNPRTVEEVF RDFKGRRAGI 60
LRALTTDVKE FFQQCNPEKD NLCLYGFPNE VWEVNLPAEE VPPELPEPAL GINFARDGMQ 120
EKEWISLVAV HSDAWLLSVS FYFGSRFGFD KADRKRLFNM INEVPTVFEV VTGSAKKQTE 180
EQPSSVNKNS NRSKSNSKVV VNVFFDLEMQ RDVDVKSSRT IEVDEEEEGV EEEEEDEEEH 240
GETLCGACGD NYASDFWICC DMCEKWFHGK CVKITPARAE HIKQYKCPSC SNKRARP 297
Nucleotide Sequence
(Fasta)		ACTCACTTGA AACCAAAAAG AAAAAGACTT TTGCTTCTTT TTTTTCTTTT TCGAAAAAGA 60
CACAAACTTG AGTGCCGCTC TTTCATCGTG AGGAAGATGG AAGGAGGAGG AGGTGCCCGC 120
TACAACCCAA GAACGGTAGA AGAAGTCTTC CGAGATTTCA AGGGCCGTCG TGCTGGCATC 180
CTCCGTGCTC TCACCACCGA TGTGAAAGAG TTTTTCCAGC AATGCAATCC TGAGAAGGAC 240
AATCTTTGTC TGTATGGATT CCCAAATGAA GTGTGGGAAG TCAACTTACC AGCTGAAGAA 300
GTGCCTCCAG AGCTCCCTGA GCCTGCTCTC GGCATCAACT TTGCTAGAGA TGGAATGCAG 360
GAAAAAGAAT GGATTTCTCT CGTTGCTGTC CACAGTGATG CCTGGTTGCT TTCTGTATCC 420
TTTTACTTCG GTTCAAGATT TGGTTTCGAT AAAGCTGACA GGAAGCGCTT GTTCAACATG 480
ATAAACGAGG TTCCTACTGT ATTTGAAGTT GTAACTGGAA GTGCGAAGAA ACAAACGGAG 540
GAACAGCCTT CTTCAGTTAA TAAAAATAGC AACAGATCCA AGTCTAATTC AAAAGTGGTA 600
GTAAATGTTT TCTTTGATCT GGAAATGCAG AGAGATGTAG ACGTCAAAAG CTCAAGGACA 660
ATAGAGGTCG ACGAGGAGGA GGAAGGAGTA GAGGAAGAGG AAGAGGATGA AGAGGAACAC 720
GGTGAGACCC TATGTGGAGC TTGTGGAGAT AACTATGCTT CTGATTTCTG GATTTGCTGC 780
GACATGTGCG AGAAATGGTT TCATGGGAAG TGTGTGAAGA TCACTCCAGC TAGAGCTGAA 840
CATATCAAGC AATACAAGTG CCCTTCTTGC AGCAACAAAA GAGCTCGACC CTAA 895
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 94 1e-108 390
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 81 3e-93 338
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 79 6e-92 334
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 76 4e-90 328
WERAM-Viv-0061 VIT_09s0002g01600.t01 Vitis vinifera 77 3e-89 325
WERAM-Thc-0077 EOY27191 Theobroma cacao 76 4e-89 325
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 76 2e-88 323
WERAM-Prp-0082 EMJ27202 Prunus persica 73 2e-86 316
WERAM-Amt-0032 ERN11177 Amborella trichopoda 73 3e-85 312
WERAM-Met-0013 KEH39913 Medicago truncatula 72 3e-84 308
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 69 1e-83 306
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 70 2e-83 306
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 67 1e-80 296
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 62 8e-78 287
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 66 1e-77 286
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 65 1e-77 286
WERAM-Sei-0118 Si030765m Setaria italica 66 2e-77 286
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 65 9e-77 284
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 61 9e-77 283
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 61 2e-76 283
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 61 2e-76 283
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 61 2e-76 283
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 61 2e-76 283
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 61 2e-76 283
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 61 2e-76 283
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 61 2e-76 283
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 61 2e-76 282
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 61 3e-76 282
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 64 3e-76 282
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 60 9e-76 280
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 65 7e-74 274
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 1e-72 270
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 63 3e-69 259
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 64 3e-67 252
Created Date 25-Jun-2016