WERAM Information

Tag Content
WERAM ID WERAM-Brd-0116
Ensembl Protein ID BRADI4G40230.1
Gene Name BRADI4G40230.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI4G40230 BRADI4G40230.1 BRADI4G40230.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.00e-12 48.6 209 259
Organism Brachypodium distachyon
Domain Profile
  Me_Reader PHD
         PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                     t+C +Cg+++ +e+++++Cd C++wfH+kCvk++  +++  k++ Cp+C  
  BRADI4G40230.1 209 TMCGACGENYGQEEFWICCDLCEKWFHGKCVKITPAKAEHIKHYKCPNCSS 259
                     68****999999999*******************555554479******75 PP
Protein Sequence
(Fasta)		MDNGGGGGMM RATGQGAVRR TPEDVFRDYR ARRAGLIKAL TVDVDKFYLM CDPEKENLCL 60
YGLPNETWEV NLPAEEVPPE LPEPALGINF ARDGMNDKDW LSLVAAHSDS WLLSVAFYFG 120
ARFGFDRDSR KRLFSMINNL NTIFEVVTGS DKIQPKEKTP KNGSKSNKSG SKPARQPEPN 180
PRSSKIPLPE DNEESEGEEE KEQEDHESTM CGACGENYGQ EEFWICCDLC EKWFHGKCVK 240
ITPAKAEHIK HYKCPNCSSS SKRARA 266
Nucleotide Sequence
(Fasta)		GAAGCCCGCC TCGGGCGTTC GCCTGCGCAA GCCAAGCTCT ATCCGAGCTT TGGAGGTTTT 60
TAAACCCTCC TTCGTCTCGG CTCGGCCGCG AGCGCTTCCA AATTTCCAAT CCACTCCTCT 120
TCCACCTCCC GGAGCAAGTC TCCTCCTCCT CCTCCTCCCC TCACCCTCAC CCCACCCCAC 180
CGGCCAATGG ACAACGGCGG CGGCGGCGGC ATGATGCGGG CGACGGGGCA GGGGGCGGTG 240
CGCCGCACGC CGGAGGACGT CTTCCGGGAC TACCGCGCGC GCCGGGCCGG CCTCATCAAG 300
GCCCTCACCG TAGATGTGGA CAAGTTCTAC CTGATGTGCG ACCCAGAGAA GGAGAACCTG 360
TGTCTATATG GACTTCCCAA TGAGACATGG GAAGTGAACT TGCCTGCTGA GGAGGTCCCT 420
CCGGAACTCC CAGAGCCAGC ACTAGGAATC AACTTTGCTC GGGATGGGAT GAATGATAAA 480
GATTGGCTGT CACTTGTTGC GGCGCATAGT GATTCCTGGC TGCTGTCAGT GGCCTTCTAT 540
TTTGGAGCAA GGTTTGGGTT TGACAGGGAC TCCAGGAAAC GGCTCTTCAG CATGATAAAT 600
AACCTTAACA CCATATTTGA AGTTGTCACA GGAAGTGACA AAATTCAGCC CAAAGAAAAG 660
ACTCCTAAAA ACGGCAGTAA GAGTAACAAG TCTGGCTCGA AGCCGGCACG CCAGCCAGAG 720
CCCAACCCAA GGAGCTCGAA GATACCCCTT CCAGAGGACA ATGAAGAGAG TGAAGGGGAG 780
GAAGAGAAAG AACAGGAAGA TCATGAGAGC ACCATGTGTG GTGCGTGCGG TGAAAACTAT 840
GGACAGGAGG AGTTCTGGAT CTGCTGTGAC TTATGCGAGA AATGGTTCCA CGGCAAGTGC 900
GTGAAGATCA CTCCAGCCAA AGCGGAGCAC ATTAAGCACT ACAAGTGCCC GAATTGCAGC 960
AGTAGCAGCA AGAGAGCCAG AGCTTAA 988
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 83 9e-98 353
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 82 4e-97 351
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 82 4e-97 351
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 82 4e-97 351
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 82 4e-97 351
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 82 4e-97 351
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 82 4e-97 351
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 82 4e-97 351
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 82 4e-97 351
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 82 2e-95 345
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 82 4e-93 338
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 82 3e-91 332
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 82 5e-87 317
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 74 1e-84 310
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 70 2e-81 299
WERAM-Amt-0088 ERM99796 Amborella trichopoda 69 7e-81 297
WERAM-Sei-0086 Si023009m Setaria italica 70 1e-80 296
WERAM-Sol-0018 Solyc01g102760.2.1 Solanum lycopersicum 69 3e-80 295
WERAM-Hov-0089 MLOC_68143.1 Hordeum vulgare 69 8e-80 294
WERAM-Aet-0093 EMT29143 Aegilops tauschii 69 2e-79 292
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 69 3e-79 292
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 70 4e-79 291
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 68 5e-79 291
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 69 8e-79 290
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 70 2e-78 289
WERAM-Prp-0081 EMJ24886 Prunus persica 72 6e-78 287
WERAM-Thc-0075 EOY26404 Theobroma cacao 70 7e-78 287
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 68 7e-78 287
WERAM-Met-0172 KEH18446 Medicago truncatula 67 1e-77 286
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 67 3e-77 285
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 65 6e-74 274
WERAM-Bro-0146 Bo8g066080.1 Brassica oleracea 65 5e-73 271
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 59 2e-65 246
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 60 1e-64 243
Created Date 25-Jun-2016