WERAM Information

Tag Content
WERAM ID WERAM-Brd-0098
Ensembl Protein ID BRADI4G21040.1
Gene Name BRADI4G21040.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI4G21040 BRADI4G21040.1 BRADI4G21040.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.10e-12 48.5 197 246
Organism Brachypodium distachyon
Domain Profile
  Me_Reader PHD
         PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                     +C +Cg+++ +++++++Cd C++wfH+kCvk++  +++  k++ Cp+C  
  BRADI4G21040.1 197 LCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCSS 246
                     7****999999999*******************555554479******75 PP
Protein Sequence
(Fasta)		MDGGGTHRTP EDVFRDFRAR RAGMIKALTT DVERFYQQCD PEKENLCLYG LPNETWEVNL 60
PAEEVPPELP EPALGINFAR DGMDEKDWLS LVAVHSDAWL LAVAFYFGAR FGFDKESRKR 120
LFSMINNLST IYEVVTGTAK KQVKEKNPKS SSKSNKSGTK LSRQPEPNSR GPKMPPPKDE 180
DDSGGEEEEG EEHENALCGA CGDNYGQDEF WICCDACETW FHGKCVKITP AKAEHIKHYK 240
CPNCSSSSKR ARA 253
Nucleotide Sequence
(Fasta)		GTTCCAATTT CTAAAGCCTC TCTCTCTCGC CTCGCCAGTC GCCCCGGCCA CCAAAACCCT 60
AACCCTAGCC CCGGAGCTCC GGCGCCGCGC GCGCACCACG GAATGGACGG CGGAGGGACG 120
CACCGCACGC CGGAGGACGT GTTCCGGGAT TTCCGCGCTC GCCGGGCCGG TATGATCAAG 180
GCGCTCACCA CCGATGTGGA GAGGTTCTAC CAGCAGTGCG ACCCAGAAAA AGAGAATCTG 240
TGCCTGTATG GTCTACCCAA TGAAACGTGG GAGGTGAACT TGCCTGCGGA GGAGGTTCCT 300
CCAGAACTTC CTGAGCCAGC ACTTGGAATT AATTTTGCTC GGGACGGGAT GGATGAGAAA 360
GATTGGCTGT CACTTGTTGC GGTGCATAGT GATGCCTGGC TGCTAGCAGT GGCCTTCTAC 420
TTTGGAGCAA GATTTGGGTT TGATAAAGAA TCCAGGAAGC GGCTTTTTAG CATGATAAAC 480
AACCTCTCCA CCATATATGA GGTTGTCACG GGAACTGCAA AGAAACAGGT TAAAGAAAAA 540
AACCCCAAAA GCAGCAGCAA GAGCAATAAA TCTGGTACAA AGCTATCTCG TCAGCCAGAA 600
CCCAACTCGA GGGGTCCAAA GATGCCACCT CCGAAGGATG AGGATGATAG TGGAGGCGAG 660
GAAGAGGAAG GAGAAGAACA TGAAAACGCA TTATGTGGTG CGTGTGGTGA CAACTACGGA 720
CAGGATGAAT TCTGGATTTG TTGTGATGCT TGTGAGACAT GGTTCCATGG TAAGTGTGTG 780
AAGATCACTC CTGCCAAAGC TGAGCACATC AAGCACTACA AATGCCCGAA TTGCAGCAGC 840
AGTAGCAAGA GAGCTAGAGC ATGATATTGG ATTCCTCCAT GGCTTATGTC TGAAGAACCA 900
AGAATTTGAC TCACTGTAAA GGCCCATGGG ATGGAATGCC CAATGGTTGC GCATTCAGTT 960
GTTGCTCTGA GATTAGGACC AGCTTTAGGG GTCTTGATGT GTTGTTATTT GGTGTATGTC 1020
GGGGACACTA GATTTTCCTT TAGTAGCAAC TAATTGTAAC AGCTTGTATT TCTTGGAGCC 1080
GTCTTGGTGC ACCTCTTCTG GACTCTAGTG TCTTAGATTT CAATTGCGTA TCATGTCATT 1140
ATGTACTTCT GTAGTTGAAA AAAAATGTAT GCTGTTATTT TCAGTTTCAC TTGGAAGTTT 1200
TGATTTTCCA GAGCCATCTA TCATTTAGAC ATGAAATTAA CCCAACAGT
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 94 1e-109 393
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 94 1e-109 393
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 94 1e-109 393
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 94 1e-109 393
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 94 1e-109 393
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 94 1e-109 393
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 94 1e-109 393
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 94 1e-109 393
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 94 4e-109 391
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 92 5e-107 384
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 91 1e-106 382
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 93 8e-106 380
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 94 3e-95 345
WERAM-Mua-0103 GSMUA_Achr7P02940_001 Musa acuminata 78 6e-91 330
WERAM-Amt-0088 ERM99796 Amborella trichopoda 73 5e-86 314
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 71 4e-85 311
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 74 1e-84 309
WERAM-Sei-0086 Si023009m Setaria italica 75 3e-84 308
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 73 3e-84 308
WERAM-Prp-0081 EMJ24886 Prunus persica 74 8e-83 303
WERAM-Thc-0075 EOY26404 Theobroma cacao 73 2e-82 302
WERAM-Aet-0106 EMT19247 Aegilops tauschii 72 1e-81 300
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 72 1e-81 300
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 71 1e-81 299
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 71 2e-81 299
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 72 2e-81 298
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 71 4e-81 298
WERAM-Met-0117 KEH32736 Medicago truncatula 69 5e-81 297
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 71 7e-81 297
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 72 5e-79 291
WERAM-Brr-0124 Bra024817.1-P Brassica rapa 68 1e-77 286
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 66 4e-77 284
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 64 1e-67 253
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 64 6e-67 251
Created Date 25-Jun-2016