WERAM Information

Tag Content
WERAM ID WERAM-Tra-0007
Ensembl Protein ID Traes_1AL_EA4807F41.2
Gene Name TRAES_3BF138600040CFD_c1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_1AL_EA4807F41 Traes_1AL_EA4807F41.2 Traes_1AL_EA4807F41.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 8.60e-12 47.3 206 256
Organism Triticum aestivum
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                            t+C +Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C +
  Traes_1AL_EA4807F41.2 206 TLCGTCGTNDGKDEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSN 256
                            78****998888999*******************666664479******86 PP
Protein Sequence
(Fasta)		RHRRRRWRAL RLPHGGGGLP RLPRPPRRHD QGPHPREVDK FYQLCDPEKE NLCLYGYPNE 60
TWEVTLPAEE VPPEIPEPAL GINFARDGMN EKDWLALVAV HSDSWLLAVS FYFAARFGFD 120
KEARRRLFNM INNLPTIFEV VTGAAKKQIK EKAPNSTHKS NNKPSMKTYS KPESQSKAPK 180
IAAPPKDEDE SGEDYGEEEE EERDNTLCGT CGTNDGKDEF WICCDNCERW YHGKCVKITP 240
ARAEHIKHYK CPDCSNKRAR A 261
Nucleotide Sequence
(Fasta)		CCGGCACCGG CGCCGGCGCT GGCGCGCCCT ACGCCTCCCG CACGGCGGAG GAGGTCTTCC 60
GCGACTTCCG CGGCCGCCGC GCCGGCATGA TCAAGGCCCT CACCCAAGAG AAGTGGACAA 120
GTTCTACCAG CTCTGCGACC CCGAAAAGGA GAACTTGTGC CTTTATGGGT ACCCTAATGA 180
AACATGGGAA GTGACGTTGC CAGCTGAGGA AGTCCCCCCA GAGATTCCTG AACCAGCACT 240
TGGAATCAAC TTTGCTAGGG ATGGCATGAA CGAGAAGGAT TGGTTGGCAC TAGTTGCTGT 300
TCACAGTGAT TCCTGGTTGT TGGCTGTTTC ATTCTACTTC GCGGCACGGT TTGGATTTGA 360
CAAAGAGGCA AGGAGGCGAC TCTTCAACAT GATAAATAAC CTGCCTACAA TATTTGAAGT 420
CGTGACCGGG GCTGCAAAGA AGCAGATCAA GGAGAAGGCC CCCAACAGTA CGCACAAGAG 480
CAATAATAAG CCAAGCATGA AAACTTATTC AAAGCCTGAG TCCCAGTCAA AGGCCCCAAA 540
GATAGCAGCA CCCCCAAAGG ATGAAGACGA GAGCGGCGAG GACTATGGAG AAGAAGAGGA 600
GGAAGAGCGC GACAACACCT TGTGTGGTAC CTGTGGAACA AACGACGGCA AGGACGAGTT 660
CTGGATCTGC TGCGACAACT GCGAGCGGTG GTATCATGGG AAATGCGTCA AGATCACGCC 720
TGCTCGAGCC GAGCACATCA AGCACTACAA GTGCCCAGAC TGCAGCAACA AGAGGGCGAG 780
GGCGTAACGG CGACAAACAG CACCAGCAGG GCGGCAGGAC TCGGAATGGA ACCAGCGCCG 840
GCACCAAATC GCCATCGTCG ATGCCTGCTG CAGCCTGCAG ATATGGCCTA GCTCTCTAGC 900
TCATCATAGA CTCGCTTTTC GTTTCAGTCG AACACTGTTG ATTCACCCTT GACCCTGCAG 960
TTCGTTCATG TTGGTCCGAC TCTTGACTTG TGTGTGTTTT AAACCGTTGG TTGGTCGGTG 1020
TAGTAGTGTT GTACCAGCTT CGATCTCTTC AGCGGACATG TCAAAGGCGT TCTTCA 1077
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0106 EMT19247 Aegilops tauschii 100 3e-111 398
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 95 2e-104 375
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 93 8e-103 370
WERAM-Sei-0086 Si023009m Setaria italica 88 4e-99 357
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 88 7e-99 357
WERAM-Orbr-0061 OB05G24700.1 Oryza brachyantha 90 6e-95 344
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 85 2e-94 342
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 90 3e-94 341
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 91 5e-94 340
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 90 6e-94 340
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 90 6e-94 340
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 90 6e-94 340
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 90 6e-94 340
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 90 6e-94 340
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 90 6e-94 340
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 90 6e-94 340
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 80 4e-90 328
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 84 1e-86 316
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 77 5e-85 311
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 71 2e-76 282
WERAM-Amt-0088 ERM99796 Amborella trichopoda 71 7e-76 280
WERAM-Prp-0082 EMJ27202 Prunus persica 68 9e-76 280
WERAM-Glm-0084 GLYMA07G40165.1 Glycine max 68 9e-75 277
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 70 3e-74 275
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 67 6e-74 274
WERAM-Thc-0077 EOY27191 Theobroma cacao 69 8e-74 273
WERAM-Met-0056 AES67803 Medicago truncatula 66 4e-73 271
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 66 8e-73 270
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 67 9e-73 270
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 67 1e-72 270
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 64 4e-70 261
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 64 5e-70 261
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 64 1e-64 243
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 4e-61 231
Created Date 25-Jun-2016