WERAM Information

Tag Content
WERAM ID WERAM-Sei-0070
Ensembl Protein ID Si017398m
Gene Name SETIT_017398mg
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Si017398m.g Si017398m Si017398m
Si017398m.g Si017404m Si017404m
Si017398m.g Si017817m Si017817m
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.00e-21 76.9 113 363
Organism Setaria italica
Domain Profile
  HDAC Class-I
  class-1.txt  23 kpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg.lfeycqlitGasleaakkLnkk 119
                   p ++  +  ++ + gl ++ +iv+p +as ++ll +hse y++ lk++e+     +  e+   ++  +  v ++ l+ + + ++G+ l+a   L++ 
    Si017398m 113 APVKWGHVRGFLEDAGLLQSDRIVEPLEASEDDLLLVHSESYLNSLKSSEEVAR--I-VEVPAVALLPNLLVQQKlLYPFRKQVGGSVLSAKLALER- 206
                  6788888999999999******************************98765433..2.355666666677776652688888888877777777755. PP
  class-1.txt 120 eadiainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
                      ain   G hh   +e  Gfc   Di l i       + +rv+ id+d h G+g e+ f    rv t+ +++
    Si017398m 207 --GWAINIG-GGHHCSAEEGGGFCAYADISLCIHFAFVclNISRVMIIDLDAHQGNGHEKDFGGDGRVYTLDMYN 278
                  ..5689975.55999*****************97544324899***************************88754 PP
  class-1.txt 242 ieafePeavvlqcGaDslagDrlgefnlsikgha....ecvkfvksfnlpllvlGGGGYtlr 299
                   ++f P+ +v + G+D l gD+lg  ++s +g a    ++ +f k+  +pll+l  GGY + 
    Si017398m 302 ESRFLPQLIVYNAGTDILDGDPLGRLKVSPEGVAirdeKVFRFAKDQSIPLLMLTSGGYMKS 363
                  4589****************************975554699******************764 PP
Protein Sequence
(Fasta)		MGRRWLPEAA KPARGYATSR AVTRGNLWRL PRSHQAGSIP GEPSPFRRRM ASASASGAPA 60
AAEVLRRRRI ISSRLYLDDI RAPRSVTRPR SPPPLQPRFA AVGRNNRAPF AQAPVKWGHV 120
RGFLEDAGLL QSDRIVEPLE ASEDDLLLVH SESYLNSLKS SEEVARIVEV PAVALLPNLL 180
VQQKLLYPFR KQVGGSVLSA KLALERGWAI NIGGGHHCSA EEGGGFCAYA DISLCIHFAF 240
VCLNISRVMI IDLDAHQGNG HEKDFGGDGR VYTLDMYNSG IYPFDHVAKK YIDQKVELDV 300
AESRFLPQLI VYNAGTDILD GDPLGRLKVS PEGVAIRDEK VFRFAKDQSI PLLMLTSGGY 360
MKSSARVIAD SIINLSKKNL IDIGEKSPWI VAESYPGLVF GM 402
Nucleotide Sequence
(Fasta)		ATGGGCCGGA GGTGGCTCCC GGAAGCAGCA AAGCCAGCAA GAGGTTACGC GACCAGTAGA 60
GCCGTTACGC GCGGCAACCT CTGGCGACTC CCACGGTCCC ACCAGGCCGG CAGCATACCA 120
GGTGAGCCTT CTCCTTTCCG GCGGCGGATG GCGTCGGCGT CGGCGTCGGG GGCTCCAGCA 180
GCGGCGGAGG TGCTCCGCCG CCGCCGCATC ATCTCCAGCC GGCTCTACCT CGACGACATC 240
CGAGCTCCAA GGTCGGTCAC CCGCCCCCGA TCCCCTCCTC CTCTGCAACC TCGATTCGCT 300
GCCGTGGGTC GTAACAACCG CGCGCCGTTC GCGCAGGCAC CCGTGAAATG GGGCCACGTG 360
CGCGGCTTCC TTGAGGACGC GGGGCTCCTC CAGAGCGACC GGATCGTCGA GCCGCTGGAA 420
GCCTCGGAGG ATGATCTGCT TCTGGTGCAC TCAGAGTCAT ACTTGAACAG CCTTAAGAGC 480
AGCGAGGAGG TTGCCCGCAT TGTAGAGGTT CCAGCAGTGG CGCTGCTCCC TAACTTGCTT 540
GTTCAGCAAA AACTTCTTTA CCCATTTCGG AAGCAGGTGG GTGGCTCTGT TTTATCAGCC 600
AAACTTGCAC TAGAAAGGGG ATGGGCTATC AACATTGGTG GAGGCCATCA CTGTTCAGCA 660
GAGGAAGGGG GTGGATTTTG TGCATATGCT GATATTTCCC TGTGCATCCA TTTTGCTTTC 720
GTCTGTTTAA ATATTTCAAG AGTAATGATC ATTGATCTAG ATGCTCACCA AGGAAATGGT 780
CATGAAAAAG ACTTTGGCGG TGATGGAAGG GTTTACACTT TGGACATGTA CAATTCTGGA 840
ATATATCCTT TTGATCATGT GGCTAAGAAA TACATTGATC AAAAGGTCGA GTTAGATGTA 900
GCTGAAAGTA GATTTCTGCC CCAGTTGATT GTGTATAATG CTGGAACTGA TATTCTAGAT 960
GGTGATCCTT TAGGCAGGCT AAAGGTTAGT CCAGAGGGTG TGGCTATTCG AGATGAAAAG 1020
GTTTTTAGAT TTGCAAAGGA TCAGAGTATT CCCCTCCTCA TGCTGACATC AGGAGGCTAT 1080
ATGAAGTCAA GCGCCCGAGT TATAGCAGAT TCGATTATCA ACCTATCAAA GAAAAACCTG 1140
ATAGATATAG GAGAAAAGTC CCCATGGATT GTGGCTGAGA GCTACCCGGG CCTGGTCTTT 1200
GGCATGTAGC CTTTGCCCTC TCCTCTCTGG CACCTTGACT CGGAAGAAAG GTACACATTT 1260
ATCCCTACTG AACCGTTGCT GACAGGTTAC CGTACACTAT TTTTCGGTTC TTTTTTTTTC 1320
CCAGCTTGTG CTAGCTGGGC ATAATTTGTG GCGTGCCAAT CTCCAACGTT TTGCATGATG 1380
ATATGGTGGA GTCTCACTTC TTAAGTCGAC GTCAACCCTC CTCCAAGATC AAGCCAAATT 1440
CTACACTCTC CGATTTCTAG GAAAACGATG GCACACTTGA AGGATGGTCA TGCAAATGGA 1500
GCAATGGAGT GGACAGAGGC CTGGTGGACA ACCATGTGCG CCATCCACAA AATCTTGTAA 1560
TCTTAATTAG ATTTGAAGGG AGCTGCAGTT TTTGAAGATA TTGTTGCCTT TTTTTTTTGA 1620
AAAGCTAACA CTAACTTGTA GAAGATGTAT TTAGGGCTAG TTTGTTTAAG CTTTTCTTGT 1680
AGAAGATGTA TTTAGGGCTA GTT 1704
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0067 Sb04g007780.1 Sorghum bicolor 80 2e-122 436
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 76 5e-119 424
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 76 5e-119 424
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 76 5e-119 424
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 76 5e-119 424
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 76 5e-119 424
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 76 6e-119 424
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 75 1e-118 423
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 76 2e-116 416
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 73 5e-113 405
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 69 8e-113 404
WERAM-Tra-0305 Traes_7BL_61CFBC1F9.2 Triticum aestivum 73 2e-112 403
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 72 2e-112 403
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 70 1e-108 390
WERAM-Aet-0055 EMT26973 Aegilops tauschii 65 5e-106 382
WERAM-Met-0014 AES59273 Medicago truncatula 70 1e-105 380
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 69 8e-104 374
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 69 1e-103 374
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 68 2e-102 370
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 68 4e-102 368
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 66 1e-101 367
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 67 5e-100 362
WERAM-Thc-0103 EOY29884 Theobroma cacao 68 1e-99 360
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 72 8e-99 357
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 66 3e-97 352
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 66 3e-97 352
WERAM-Php-0113 PP1S53_217V6.1 Physcomitrella patens 66 4e-95 345
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 71 2e-94 343
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 81 5e-94 342
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 59 8e-87 318
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 71 4e-85 312
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 58 2e-78 290
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 57 4e-78 289
WERAM-Prp-0064 EMJ26901 Prunus persica 67 1e-76 284
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 56 1e-76 284
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 56 2e-76 283
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 56 2e-75 280
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 53 3e-75 279
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 52 4e-75 279
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 54 5e-75 278
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 54 6e-75 278
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 53 6e-75 278
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 54 6e-75 278
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 54 9e-75 278
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 56 9e-75 278
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 55 2e-74 277
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 56 2e-74 276
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 54 2e-74 276
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 52 3e-74 276
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 52 3e-74 276
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 53 3e-74 276
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 53 3e-74 276
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 52 4e-74 276
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 52 4e-74 275
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 54 4e-74 275
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 52 5e-74 275
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 55 5e-74 275
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 54 6e-74 275
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 55 7e-74 275
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 52 8e-74 275
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 54 9e-74 274
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 52 1e-73 274
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 53 1e-73 274
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 55 2e-73 273
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 52 2e-73 273
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 53 2e-73 273
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 52 2e-73 273
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 52 2e-73 273
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 55 3e-73 272
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 50 4e-73 272
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 54 5e-72 269
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 73 2e-71 267
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 52 3e-71 266
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 54 4e-71 266
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 51 4e-71 265
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 55 1e-69 261
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 53 1e-69 260
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 49 2e-65 247
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 56 7e-64 241
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 62 1e-62 237
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 48 5e-62 235
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 53 7e-62 235
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 50 1e-61 234
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 47 9e-60 228
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 46 7e-58 222
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 55 4e-57 219
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 42 5e-57 219
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 42 4e-56 216
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 46 5e-52 202
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 50 2e-49 193
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 45 2e-48 190
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 51 4e-34 142
WERAM-Amt-0062 ERN16364 Amborella trichopoda 59 3e-33 140
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 42 1e-32 138
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 52 8e-31 132
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 48 3e-28 123
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 38 5e-26 116
WERAM-Osl-0037 ABP00055 Ostreococcus lucimarinus 28 1e-21 101
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 32 4e-21 99.8
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 30 3e-20 97.1
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 27 2e-17 87.8
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 28 1e-13 75.1
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 28 2e-13 74.3
WERAM-Asg-0010 AAS51704 Ashbya gossypii 25 3e-13 73.9
WERAM-Scj-0027 EEB08472 Schizosaccharomyces japonicus 30 5e-13 72.8
WERAM-Tas-0086 ENSTSYP00000008784.1 Tarsius syrichta 25 8e-13 72.4
WERAM-Caa-0034 KGT64501 Candida albicans 24 1e-12 71.6
WERAM-Phn-0003 SNOT_00459 Phaeosphaeria nodorum 31 2e-12 70.9
WERAM-Mel-0007 EGF99116 Melampsora laricipopulina 33 4e-12 70.1
WERAM-Pug-0033 EFP89819 Puccinia graminis 33 4e-12 69.7
Created Date 25-Jun-2016